Abstract: Perception reaction time and mental workload have proven to be crucial in manual driving. Moreover, in highly automated cars, where most of the research is focusing on Level 4 Autonomous driving, take-over performance is also a key factor when taking road safety into account. This study aims to investigate how the immersion in non-driving related tasks affects the take-over performance of drivers in given scenarios. The paper also highlights the use of virtual simulators to gather efficient data that can be crucial in easing the transition between manual and autonomous driving scenarios. The use of Computer Aided Simulations is of absolute importance in this day and age since the automotive industry is rapidly moving towards Autonomous technology. An experiment comprising of 40 subjects was performed to examine the reaction times of driver and the influence of other variables in the success of take-over performance in highly automated driving under different circumstances within a highway virtual environment. The results reflect the relationship between reaction times under different scenarios that the drivers might face under the circumstances stated above as well as the importance of variables such as velocity in the success on regaining car control after automated driving. The implications of the results acquired are important for understanding the criteria needed for designing Human Machine Interfaces specifically aimed towards automated driving conditions. Understanding the need to keep drivers in the loop during automation, whilst allowing drivers to safely engage in other non-driving related tasks is an important research area which can be aided by the proposed study.

Abstract: The efficiency of lung cancer screening for reducing mortality is hindered by the high rate of false positives. Artificial intelligence applied to radiomics could help to early discard benign cases from the analysis of CT scans. The available amount of data and the fact that benign cases are a minority, constitutes a main challenge for the successful use of state of the art methods (like deep learning), which can be biased, over-fitted and lack of clinical reproducibility. We present an hybrid approach combining the potential of radiomic features to characterize nodules in CT scans and the generalization of the feed forward networks. In order to obtain maximal reproducibility with minimal training data, we propose an embedding of nodules based on the statistical significance of radiomic features for malignancy detection. This representation space of lesions is the input to a feed
forward network, which architecture and hyperparameters are optimized using own-defined metrics of the diagnostic power of the whole system. Results of the best model on an independent set of patients achieve 100% of sensitivity and 83% of specificity (AUC = 0.94) for malignancy detection.

Abstract: The mass irruption of Deep Convolutional Neural Networks (CNNs) in computer vision since 2012 led to a dominance of the image understanding paradigm consisting in an end-to-end fully supervised learning workflow over large-scale annotated datasets. This approach proved to be extremely useful at solving a myriad of classic and new computer vision tasks with unprecedented performance —often, surpassing that of humans—, at the expense of vast amounts of human-labeled data, extensive computational resources and the disposal of all of our prior knowledge on the task at hand. Even though simple transfer learning methods, such as fine-tuning, have achieved remarkable impact, their success when the amount of labeled data in the target domain is small is limited. Furthermore, the non-static nature of data generation sources will often derive in data distribution shifts that degrade the performance of deployed models. As a consequence, there is a growing demand for methods that can exploit elements of prior knowledge and sources of information other than the manually generated ground truth annotations of the images during the network training process, so that they can adapt to new domains that constitute, if not a small data regime, at least a small labeled data regime. This thesis targets such few or no labeled data scenario in three distinct image-to-image mapping learning problems. It contributes with various approaches that leverage our previous knowledge of different elements of the image formation process: We first present a data-efficient framework for both defocus and motion blur detection, based on a model able to produce realistic synthetic local degradations. The framework comprises a self-supervised, a weakly-supervised and a semi-supervised instantiation, depending on the absence or availability and the nature of human annotations, and outperforms fully-supervised counterparts in a variety of settings. Our knowledge on color image formation is then used to gather input and target ground truth image pairs for the RGB to hyperspectral image reconstruction task. We make use of a CNN to tackle this problem, which, for the first time, allows us to exploit spatial context and achieve state-of-the-art results given a limited hyperspectral image set. In our last contribution to the subfield of data-efficient image-to-image transformation problems, we present the novel semi-supervised task of zero-pair cross-view semantic segmentation: we consider the case of relocation of the camera in an end-to-end trained and deployed monocular, fixed-view semantic segmentation system often found in industry. Under the assumption that we are allowed to obtain an additional set of synchronized but unlabeled image pairs of new scenes from both original and new camera poses, we present ZPCVNet, a model and training procedure that enables the production of dense semantic predictions in either source or target views at inference time. The lack of existing suitable public datasets to develop this approach led us to the creation of MVMO, a large-scale Multi-View, Multi-Object path-traced dataset with per-view semantic segmentation annotations. We expect MVMO to propel future research in the exciting under-developed fields of cross-view and multi-view semantic segmentation. Last, in a piece of applied research of direct application in the context of process monitoring of an Electric Arc Furnace (EAF) in a steelmaking plant, we also consider the problem of simultaneously estimating the temperature and spectral emissivity of distant hot emissive samples. To that end, we design our own capturing device, which integrates three point spectrometers covering a wide range of the Ultra-Violet, visible, and Infra-Red spectra and is capable of registering the radiance signal incoming from an 8cm diameter spot located up to 20m away. We then define a physically accurate radiative transfer model that comprises the effects of atmospheric absorbance, of the optical system transfer function, and of the sample temperature and spectral emissivity themselves. We solve this inverse problem without the need for annotated data using a probabilistic programming-based Bayesian approach, which yields full posterior distribution estimates of the involved variables that are consistent with laboratory-grade measurements.

Abstract: Despite decades of research in Optical Music Recognition (OMR), the recognition of old handwritten music scores remains a challenge because of the variabilities in the handwriting styles, paper degradation, lack of standard notation, etc. Therefore, the research in OMR systems adapted to the particularities of old manuscripts is crucial to accelerate the conversion of music scores existing in archives into digital libraries, fostering the dissemination and preservation of our music heritage. In this paper we explore the adaptation of sequence-to-sequence models with attention mechanism (used in translation and handwritten text recognition) and the generation of specific synthetic data for recognizing old music scores. The experimental validation demonstrates that our approach is promising, especially when compared with long short-term memory neural networks.

Abstract: Metric learning refers to the problem in machine learning of learning a distance or similarity measurement to compare data. In particular, deep metric learning involves learning a representation, also referred to as embedding, such that in the embedding space data samples can be compared based on the distance, directly providing a similarity measure. This step is necessary to perform several tasks in computer vision. It allows to perform the classification of images, regions or pixels, re-identification, out-of-distribution detection, object tracking in image sequences and any other task that requires computing a similarity score for their solution. This thesis addresses three specific problems that share this common requirement. The first one is person re-identification. Essentially, it is an image retrieval task that aims at finding instances of the same person according to a similarity measure. We first compare in terms of accuracy and efficiency, classical metric learning to basic deep learning based methods for this problem. In this context, we also study network distillation as a strategy to optimize the trade-off between accuracy and speed at inference time. The second problem we contribute to is novelty detection in image classification. It consists in detecting samples of novel classes, i.e. never seen during training. However, standard novelty detection does not provide any information about the novel samples besides they are unknown. Aiming at more informative outputs, we take advantage from the hierarchical taxonomies that are intrinsic to the classes. We propose a metric learning based approach that leverages the hierarchical relationships among classes during training, being able to predict the parent class for a novel sample in such hierarchical taxonomy. Our third contribution is in multi-object tracking and segmentation. This joint task comprises classification, detection, instance segmentation and tracking. Tracking can be formulated as a retrieval problem to be addressed with metric learning approaches. We tackle the existing difficulty in academic research that is the lack of annotated benchmarks for this task. To this matter, we introduce the problem of weakly supervised multi-object tracking and segmentation, facing the challenge of not having available ground truth for instance segmentation. We propose a synergistic training strategy that benefits from the knowledge of the supervised tasks that are being learnt simultaneously.

Abstract: Obtaining a standardized benchmark of computational methods is a major issue in data-science communities. Dedicated frameworks enabling fair benchmarking in a unified environment are yet to be developed. Here, we introduce Codabench, a meta-benchmark platform that is open sourced and community driven for benchmarking algorithms or software agents versus datasets or tasks. A public instance of Codabench is open to everyone free of charge and allows benchmark organizers to fairly compare submissions under the same setting (software, hardware, data, algorithms), with custom protocols and data formats. Codabench has unique features facilitating easy organization of flexible and reproducible benchmarks, such as the possibility of reusing templates of benchmarks and supplying compute resources on demand. Codabench has been used internally and externally on various applications, receiving more than 130 users and 2,500 submissions. As illustrative use cases, we introduce four diverse benchmarks covering graph machine learning, cancer heterogeneity, clinical diagnosis, and reinforcement learning.