Abstract: Handwritten text recognition in low resource scenarios, such as manuscripts with rare alphabets, is a challenging problem. In this paper, we propose a few-shot learning-based handwriting recognition approach that significantly reduces the human annotation process, by requiring only a few images of each alphabet symbols. The method consists of detecting all the symbols of a given alphabet in a textline image and decoding the obtained similarity scores to the final sequence of transcribed symbols. Our model is first pretrained on synthetic line images generated from an alphabet, which could differ from the alphabet of the target domain. A second training step is then applied to reduce the gap between the source and the target data. Since this retraining would require annotation of thousands of handwritten symbols together with their bounding boxes, we propose to avoid such human effort through an unsupervised progressive learning approach that automatically assigns pseudo-labels to the unlabeled data. The evaluation on different datasets shows that our model can lead to competitive results with a significant reduction in human effort. The code will be publicly available in the following repository: https://github.com/dali92002/HTRbyMatching

Abstract: Image and video enhancement aims at improving the signal quality relative to imaging artifacts such as noise and blur or atmospheric perturbations such as turbulence and haze. It is usually performed in order to assist humans in analyzing image and video content or simply to present humans visually appealing images and videos. However, image and video enhancement can also be used as a preprocessing technique to ease the task and thus improve the performance of subsequent automatic image content analysis algorithms: preceding dehazing can improve object detection as shown by [23] or explicit turbulence modeling can improve moving object detection as discussed by [24]. But it remains an open question whether image and video enhancement should rather be performed explicitly as a preprocessing step or implicitly for example by feeding affected images directly to a neural network for image content analysis like object detection [25]. Especially for real-time video processing at low latency it can be better to handle image perturbation implicitly in order to minimize the processing time of an algorithm. This can be achieved by making algorithms for image content analysis robust or even invariant to perturbations such as noise or blur. Additionally, mistakes of an individual preprocessing module can obviously affect the quality of the entire processing pipeline.

Abstract: In most eukaryotes, pairing of homologous chromosomes is an essential feature of meiosis that ensures homologous recombination and segregation. However, when the pairing process begins, it is still under investigation. Contrasting data exists in Mus musculus, since both leptotene DSB-dependent and preleptotene DSB-independent mechanisms have been described. To unravel this contention, we examined homologous pairing in pre-meiotic and meiotic Mus musculus cells using a threedimensional fuorescence in situ hybridization-based protocol, which enables the analysis of the entire karyotype using DNA painting probes. Our data establishes in an unambiguously manner that 73.83% of homologous chromosomes are already paired at premeiotic stages (spermatogonia-early preleptotene spermatocytes). The percentage of paired homologous chromosomes increases to 84.60% at mid-preleptotene-zygotene stage, reaching 100% at pachytene stage. Importantly, our results demonstrate a high percentage of homologous pairing observed before the onset of meiosis; this pairing does not occur randomly, as the percentage was higher than that observed in somatic cells (19.47%) and between nonhomologous chromosomes (41.1%). Finally, we have also observed that premeiotic homologous pairing is asynchronous and independent of the chromosome size, GC content, or presence of NOR regions.

Abstract: In the quality evaluation of high dynamic range and wide color gamut (HDR/WCG) images, a number of works have concluded that native HDR metrics, such as HDR visual difference predictor (HDR-VDP), HDR video quality metric (HDR-VQM), or convolutional neural network (CNN)-based visibility metrics for HDR content, provide the best results. These metrics consider only the luminance component, but several color difference metrics have been specifically developed for, and validated with, HDR/WCG images. In this paper, we perform subjective evaluation experiments in a professional HDR/WCG production setting, under a real use case scenario. The results are quite relevant in that they show, firstly, that the performance of HDR metrics is worse than that of a classic, simple standard dynamic range (SDR) metric applied directly to the HDR content; and secondly, that the chrominance metrics specifically developed for HDR/WCG imaging have poor correlation with observer scores and are also outperformed by an SDR metric. Based on these findings, we show how a very simple framework for creating color HDR metrics, that uses only luminance SDR metrics, transfer functions, and classic color spaces, is able to consistently outperform, by a considerable margin, state-of-the-art HDR metrics on a varied set of HDR content, for both perceptual quantization (PQ) and Hybrid Log-Gamma (HLG) encoding, luminance and chroma distortions, and on different color spaces of common use.

Abstract: In this paper we propose a generative adversarial network (GAN) framework to enhance the perceptual quality of compressed videos. Our framework includes attention and adaptation to different quantization parameters (QPs) in a single model. The attention module exploits global receptive fields that can capture and align long-range correlations between consecutive frames, which can be beneficial for enhancing perceptual quality of videos. The frame to be enhanced is fed into the deep network together with its neighboring frames, and in the first stage features at different depths are extracted. Then extracted features are fed into attention blocks to explore global temporal correlations, followed by a series of upsampling and convolution layers. Finally, the resulting features are processed by the QP-conditional adaptation module which leverages the corresponding QP information. In this way, a single model can be used to enhance adaptively to various QPs without requiring multiple models specific for every QP value, while having similar performance. Experimental results demonstrate the superior performance of the proposed PeQuENet compared with the state-of-the-art compressed video quality enhancement algorithms.

Abstract: In this paper, we investigate the continual learning of Vision Transformers (ViT) for the challenging exemplar-free scenario, with special focus on how to efficiently distill the knowledge of its crucial self-attention mechanism (SAM). Our work takes an initial step towards a surgical investigation of SAM for designing coherent continual learning methods in ViTs. We first carry out an evaluation of established continual learning regularization techniques. We then examine the effect of regularization when applied to two key enablers of SAM: (a) the contextualized embedding layers, for their ability to capture well-scaled representations with respect to the values, and (b) the prescaled attention maps, for carrying value-independent global contextual information. We depict the perks of each distilling strategy on two image recognition benchmarks (CIFAR100 and ImageNet-32) – while (a) leads to a better overall accuracy, (b) helps enhance the rigidity by maintaining competitive performances. Furthermore, we identify the limitation imposed by the symmetric nature of regularization losses. To alleviate this, we propose an asymmetric variant and apply it to the pooled output distillation (POD) loss adapted for ViTs. Our experiments confirm that introducing asymmetry to POD boosts its plasticity while retaining stability across (a) and (b). Moreover, we acknowledge low forgetting measures for all the compared methods, indicating that ViTs might be naturally inclined continual learners. 1

Abstract: In this paper, we propose a deformable convolution-based generative adversarial network (DCNGAN) for perceptual quality enhancement of compressed videos. DCNGAN is also adaptive to the quantization parameters (QPs). Compared with optical flows, deformable convolutions are more effective and efficient to align frames. Deformable convolutions can operate on multiple frames, thus leveraging more temporal information, which is beneficial for enhancing the perceptual quality of compressed videos. Instead of aligning frames in a pairwise manner, the deformable convolution can process multiple frames simultaneously, which leads to lower computational complexity. Experimental results demonstrate that the proposed DCNGAN outperforms other state-of-the-art compressed video quality enhancement algorithms.

Abstract: In this thesis, we propose different contributions with the goal of enhancing and recognizing historical handwritten document images, especially the ones with rare scripts, such as cipher documents.
In the first part, some effective end-to-end models for Document Image Enhancement (DIE) using deep learning models were presented. First, Generative Adversarial Networks (cGAN) for different tasks (document clean-up, binarization, deblurring, and watermark removal) were explored. Next, we further improve the results by recovering the degraded document images into a clean and readable form by integrating a text recognizer into the cGAN model to promote the generated document image to be more readable. Afterward, we present a new encoder-decoder architecture based on vision transformers to enhance both machine-printed and handwritten document images, in an end-to-end fashion.
The second part of the thesis addresses Handwritten Text Recognition (HTR) in low resource scenarios, i.e. when only few labeled training data is available. We propose novel methods for recognizing ciphers with rare scripts. First, a few-shot object detection based method was proposed. Then, we incorporate a progressive learning strategy that automatically assignspseudo-labels to a set of unlabeled data to reduce the human labor of annotating few pages while maintaining the good performance of the model. Secondly, a data generation technique based on Bayesian Program Learning (BPL) is proposed to overcome the lack of data in such rare scripts. Thirdly, we propose a Text-Degradation Invariant Auto Encoder (Text-DIAE). This latter self-supervised model is designed to tackle two tasks, text recognition and document image enhancement. The proposed model does not exhibit limitations of previous state-of-the-art methods based on contrastive losses, while at the same time, it requires substantially fewer data samples to converge.
In the third part of the thesis, we analyze, from the user perspective, the usage of HTR systems in low resource scenarios. This contrasts with the usual research on HTR, which often focuses on technical aspects only and rarely devotes efforts on implementing software tools for scholars in Humanities.