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Author Hugo Bertiche; Meysam Madadi; Sergio Escalera edit   pdf
url  openurl
  Title PBNS: Physically Based Neural Simulation for Unsupervised Garment Pose Space Deformation Type Journal Article
  Year 2021 Publication ACM Transactions on Graphics Abbreviated Journal  
  Volume 40 Issue 6 Pages 1-14  
  Keywords  
  Abstract We present a methodology to automatically obtain Pose Space Deformation (PSD) basis for rigged garments through deep learning. Classical approaches rely on Physically Based Simulations (PBS) to animate clothes. These are general solutions that, given a sufficiently fine-grained discretization of space and time, can achieve highly realistic results. However, they are computationally expensive and any scene modification prompts the need of re-simulation. Linear Blend Skinning (LBS) with PSD offers a lightweight alternative to PBS, though, it needs huge volumes of data to learn proper PSD. We propose using deep learning, formulated as an implicit PBS, to unsupervisedly learn realistic cloth Pose Space Deformations in a constrained scenario: dressed humans. Furthermore, we show it is possible to train these models in an amount of time comparable to a PBS of a few sequences. To the best of our knowledge, we are the first to propose a neural simulator for cloth.
While deep-based approaches in the domain are becoming a trend, these are data-hungry models. Moreover, authors often propose complex formulations to better learn wrinkles from PBS data. Supervised learning leads to physically inconsistent predictions that require collision solving to be used. Also, dependency on PBS data limits the scalability of these solutions, while their formulation hinders its applicability and compatibility. By proposing an unsupervised methodology to learn PSD for LBS models (3D animation standard), we overcome both of these drawbacks. Results obtained show cloth-consistency in the animated garments and meaningful pose-dependant folds and wrinkles. Our solution is extremely efficient, handles multiple layers of cloth, allows unsupervised outfit resizing and can be easily applied to any custom 3D avatar.
 
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  Notes HUPBA; no proj Approved no  
  Call Number Admin @ si @ BME2021c Serial 3643  
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Author Clementine Decamps; Alexis Arnaud; Florent Petitprez; Mira Ayadi; Aurelia Baures; Lucile Armenoult; Sergio Escalera; Isabelle Guyon; Remy Nicolle; Richard Tomasini; Aurelien de Reynies; Jerome Cros; Yuna Blum; Magali Richard edit   pdf
url  openurl
  Title DECONbench: a benchmarking platform dedicated to deconvolution methods for tumor heterogeneity quantification Type Journal Article
  Year 2021 Publication BMC Bioinformatics Abbreviated Journal  
  Volume 22 Issue Pages 473  
  Keywords  
  Abstract Quantification of tumor heterogeneity is essential to better understand cancer progression and to adapt therapeutic treatments to patient specificities. Bioinformatic tools to assess the different cell populations from single-omic datasets as bulk transcriptome or methylome samples have been recently developed, including reference-based and reference-free methods. Improved methods using multi-omic datasets are yet to be developed in the future and the community would need systematic tools to perform a comparative evaluation of these algorithms on controlled data.  
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  Notes HUPBA; no proj Approved no  
  Call Number Admin @ si @ DAP2021 Serial 3650  
Permanent link to this record
 

 
Author Hao Fang; Ajian Liu; Jun Wan; Sergio Escalera; Chenxu Zhao; Xu Zhang; Stan Z Li; Zhen Lei edit   pdf
url  openurl
  Title Surveillance Face Anti-spoofing Type Journal Article
  Year 2024 Publication IEEE Transactions on Information Forensics and Security Abbreviated Journal TIFS  
  Volume 19 Issue Pages 1535-1546  
  Keywords  
  Abstract Face Anti-spoofing (FAS) is essential to secure face recognition systems from various physical attacks. However, recent research generally focuses on short-distance applications (i.e., phone unlocking) while lacking consideration of long-distance scenes (i.e., surveillance security checks). In order to promote relevant research and fill this gap in the community, we collect a large-scale Surveillance High-Fidelity Mask (SuHiFiMask) dataset captured under 40 surveillance scenes, which has 101 subjects from different age groups with 232 3D attacks (high-fidelity masks), 200 2D attacks (posters, portraits, and screens), and 2 adversarial attacks. In this scene, low image resolution and noise interference are new challenges faced in surveillance FAS. Together with the SuHiFiMask dataset, we propose a Contrastive Quality-Invariance Learning (CQIL) network to alleviate the performance degradation caused by image quality from three aspects: (1) An Image Quality Variable module (IQV) is introduced to recover image information associated with discrimination by combining the super-resolution network. (2) Using generated sample pairs to simulate quality variance distributions to help contrastive learning strategies obtain robust feature representation under quality variation. (3) A Separate Quality Network (SQN) is designed to learn discriminative features independent of image quality. Finally, a large number of experiments verify the quality of the SuHiFiMask dataset and the superiority of the proposed CQIL.  
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  Notes HUPBA Approved no  
  Call Number Admin @ si @ FLW2024 Serial 3869  
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Author Frederic Sampedro; Anna Domenech; Sergio Escalera edit  url
openurl 
  Title Obtaining quantitative global tumoral state indicators based on whole-body PET/CT scans: A breast cancer case study Type Journal Article
  Year 2014 Publication Nuclear Medicine Communications Abbreviated Journal NMC  
  Volume 35 Issue 4 Pages 362-371  
  Keywords  
  Abstract Objectives: In this work we address the need for the computation of quantitative global tumoral state indicators from oncological whole-body PET/computed tomography scans. The combination of such indicators with other oncological information such as tumor markers or biopsy results would prove useful in oncological decision-making scenarios.

Materials and methods: From an ordering of 100 breast cancer patients on the basis of oncological state through visual analysis by a consensus of nuclear medicine specialists, a set of numerical indicators computed from image analysis of the PET/computed tomography scan is presented, which attempts to summarize a patient’s oncological state in a quantitative manner taking into consideration the total tumor volume, aggressiveness, and spread.

Results: Results obtained by comparative analysis of the proposed indicators with respect to the experts’ evaluation show up to 87% Pearson’s correlation coefficient when providing expert-guided PET metabolic tumor volume segmentation and 64% correlation when using completely automatic image analysis techniques.

Conclusion: Global quantitative tumor information obtained by whole-body PET/CT image analysis can prove useful in clinical nuclear medicine settings and oncological decision-making scenarios. The completely automatic computation of such indicators would improve its impact as time efficiency and specialist independence would be achieved.
 
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  Notes HuPBA;MILAB Approved no  
  Call Number SDE2014a Serial 2444  
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Author Marina Alberti; Simone Balocco; Carlo Gatta; Francesco Ciompi; Oriol Pujol; Joana Silva; Xavier Carrillo; Petia Radeva edit  url
doi  openurl
  Title Automatic Bifurcation Detection in Coronary IVUS Sequences Type Journal Article
  Year 2012 Publication IEEE Transactions on Biomedical Engineering Abbreviated Journal TBME  
  Volume 59 Issue 4 Pages 1022-2031  
  Keywords  
  Abstract In this paper, we present a fully automatic method which identifies every bifurcation in an intravascular ultrasound (IVUS) sequence, the corresponding frames, the angular orientation with respect to the IVUS acquisition, and the extension. This goal is reached using a two-level classification scheme: first, a classifier is applied to a set of textural features extracted from each image of a sequence. A comparison among three state-of-the-art discriminative classifiers (AdaBoost, random forest, and support vector machine) is performed to identify the most suitable method for the branching detection task. Second, the results are improved by exploiting contextual information using a multiscale stacked sequential learning scheme. The results are then successively refined using a-priori information about branching dimensions and geometry. The proposed approach provides a robust tool for the quick review of pullback sequences, facilitating the evaluation of the lesion at bifurcation sites. The proposed method reaches an F-Measure score of 86.35%, while the F-Measure scores for inter- and intraobserver variability are 71.63% and 76.18%, respectively. The obtained results are positive. Especially, considering the branching detection task is very challenging, due to high variability in bifurcation dimensions and appearance.  
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  Series Volume Series Issue Edition  
  ISSN 0018-9294 ISBN Medium  
  Area Expedition Conference  
  Notes MILAB;HuPBA Approved no  
  Call Number Admin @ si @ ABG2012 Serial 1996  
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