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Francesco Ciompi; Oriol Pujol; Carlo Gatta; Marina Alberti; Simone Balocco; Xavier Carrillo; J. Mauri; Petia Radeva |
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Title |
HoliMab: A Holistic Approach for Media-Adventitia Border Detection in Intravascular Ultrasound |
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Journal Article |
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Year |
2012 |
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Medical Image Analysis |
Abbreviated Journal |
MIA |
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16 |
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6 |
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1085-1100 |
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Media–Adventitia border detection; Intravascular ultrasound; Multi-Scale Stacked Sequential Learning; Error-correcting output codes; Holistic segmentation |
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Abstract |
We present a fully automatic methodology for the detection of the Media-Adventitia border (MAb) in human coronary artery in Intravascular Ultrasound (IVUS) images. A robust border detection is achieved by means of a holistic interpretation of the detection problem where the target object, i.e. the media layer, is considered as part of the whole vessel in the image and all the relationships between tissues are learnt. A fairly general framework exploiting multi-class tissue characterization as well as contextual information on the morphology and the appearance of the tissues is presented. The methodology is (i) validated through an exhaustive comparison with both Inter-observer variability on two challenging databases and (ii) compared with state-of-the-art methods for the detection of the MAb in IVUS. The obtained averaged values for the mean radial distance and the percentage of area difference are 0.211 mm and 10.1%, respectively. The applicability of the proposed methodology to clinical practice is also discussed. |
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MILAB;HuPBA |
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no |
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Admin @ si @ CPG2012 |
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1995 |
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Author |
Marina Alberti; Simone Balocco; Carlo Gatta; Francesco Ciompi; Oriol Pujol; Joana Silva; Xavier Carrillo; Petia Radeva |
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Title |
Automatic Bifurcation Detection in Coronary IVUS Sequences |
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Journal Article |
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Year |
2012 |
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IEEE Transactions on Biomedical Engineering |
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TBME |
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59 |
Issue |
4 |
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1022-2031 |
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In this paper, we present a fully automatic method which identifies every bifurcation in an intravascular ultrasound (IVUS) sequence, the corresponding frames, the angular orientation with respect to the IVUS acquisition, and the extension. This goal is reached using a two-level classification scheme: first, a classifier is applied to a set of textural features extracted from each image of a sequence. A comparison among three state-of-the-art discriminative classifiers (AdaBoost, random forest, and support vector machine) is performed to identify the most suitable method for the branching detection task. Second, the results are improved by exploiting contextual information using a multiscale stacked sequential learning scheme. The results are then successively refined using a-priori information about branching dimensions and geometry. The proposed approach provides a robust tool for the quick review of pullback sequences, facilitating the evaluation of the lesion at bifurcation sites. The proposed method reaches an F-Measure score of 86.35%, while the F-Measure scores for inter- and intraobserver variability are 71.63% and 76.18%, respectively. The obtained results are positive. Especially, considering the branching detection task is very challenging, due to high variability in bifurcation dimensions and appearance. |
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0018-9294 |
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MILAB;HuPBA |
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Admin @ si @ ABG2012 |
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1996 |
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Antonio Hernandez; Nadezhda Zlateva; Alexander Marinov; Miguel Reyes; Petia Radeva; Dimo Dimov; Sergio Escalera |
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Title |
Human Limb Segmentation in Depth Maps based on Spatio-Temporal Graph Cuts Optimization |
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2012 |
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Journal of Ambient Intelligence and Smart Environments |
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JAISE |
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4 |
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6 |
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535-546 |
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Multi-modal vision processing; Random Forest; Graph-cuts; multi-label segmentation; human body segmentation |
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We present a framework for object segmentation using depth maps based on Random Forest and Graph-cuts theory, and apply it to the segmentation of human limbs. First, from a set of random depth features, Random Forest is used to infer a set of label probabilities for each data sample. This vector of probabilities is used as unary term in α−β swap Graph-cuts algorithm. Moreover, depth values of spatio-temporal neighboring data points are used as boundary potentials. Results on a new multi-label human depth data set show high performance in terms of segmentation overlapping of the novel methodology compared to classical approaches. |
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1876-1364 |
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MILAB;HuPBA |
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Admin @ si @ HZM2012a |
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2006 |
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Author |
Miguel Angel Bautista; Sergio Escalera; Oriol Pujol |
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Title |
On the Design of an ECOC-Compliant Genetic Algorithm |
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Journal Article |
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Year |
2014 |
Publication |
Pattern Recognition |
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PR |
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47 |
Issue |
2 |
Pages |
865-884 |
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Genetic Algorithms (GA) have been previously applied to Error-Correcting Output Codes (ECOC) in state-of-the-art works in order to find a suitable coding matrix. Nevertheless, none of the presented techniques directly take into account the properties of the ECOC matrix. As a result the considered search space is unnecessarily large. In this paper, a novel Genetic strategy to optimize the ECOC coding step is presented. This novel strategy redefines the usual crossover and mutation operators in order to take into account the theoretical properties of the ECOC framework. Thus, it reduces the search space and lets the algorithm to converge faster. In addition, a novel operator that is able to enlarge the code in a smart way is introduced. The novel methodology is tested on several UCI datasets and four challenging computer vision problems. Furthermore, the analysis of the results done in terms of performance, code length and number of Support Vectors shows that the optimization process is able to find very efficient codes, in terms of the trade-off between classification performance and the number of classifiers. Finally, classification performance per dichotomizer results shows that the novel proposal is able to obtain similar or even better results while defining a more compact number of dichotomies and SVs compared to state-of-the-art approaches. |
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HuPBA;MILAB |
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no |
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Call Number |
Admin @ si @ BEP2013 |
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2254 |
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Author |
Marina Alberti; Simone Balocco; Xavier Carrillo; J. Mauri; Petia Radeva |
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Title |
Automatic non-rigid temporal alignment of IVUS sequences: method and quantitative validation |
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Journal Article |
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Year |
2013 |
Publication |
Ultrasound in Medicine and Biology |
Abbreviated Journal |
UMB |
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Volume |
39 |
Issue |
9 |
Pages |
1698-712 |
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Keywords |
Intravascular ultrasound; Dynamic time warping; Non-rigid alignment; Sequence matching; Partial overlapping strategy |
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Clinical studies on atherosclerosis regression/progression performed by intravascular ultrasound analysis would benefit from accurate alignment of sequences of the same patient before and after clinical interventions and at follow-up. In this article, a methodology for automatic alignment of intravascular ultrasound sequences based on the dynamic time warping technique is proposed. The non-rigid alignment is adapted to the specific task by applying it to multidimensional signals describing the morphologic content of the vessel. Moreover, dynamic time warping is embedded into a framework comprising a strategy to address partial overlapping between acquisitions and a term that regularizes non-physiologic temporal compression/expansion of the sequences. Extensive validation is performed on both synthetic and in vivo data. The proposed method reaches alignment errors of approximately 0.43 mm for pairs of sequences acquired during the same intervention phase and 0.77 mm for pairs of sequences acquired at successive intervention stages. |
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MILAB |
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Admin @ si @ ABC2013 |
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2313 |
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