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Cristina Sanchez Montes; F. Javier Sanchez; Jorge Bernal; Henry Cordova; Maria Lopez Ceron; Miriam Cuatrecasas; Cristina Rodriguez de Miguel; Ana Garcia Rodriguez; Rodrigo Garces Duran; Maria Pellise; Josep Llach; Gloria Fernandez Esparrach |
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Title |
Computer-aided Prediction of Polyp Histology on White-Light Colonoscopy using Surface Pattern Analysis |
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Journal Article |
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2019 |
Publication |
Endoscopy |
Abbreviated Journal |
END |
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51 |
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3 |
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261-265 |
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Background and study aims: To evaluate a new computational histology prediction system based on colorectal polyp textural surface patterns using high definition white light images.
Patients and methods: Textural elements (textons) were characterized according to their contrast with respect to the surface, shape and number of bifurcations, assuming that dysplastic polyps are associated with highly contrasted, large tubular patterns with some degree of bifurcation. Computer-aided diagnosis (CAD) was compared with pathological diagnosis and the diagnosis by the endoscopists using Kudo and NICE classification.
Results: Images of 225 polyps were evaluated (142 dysplastic and 83 non-dysplastic). CAD system correctly classified 205 (91.1%) polyps, 131/142 (92.3%) dysplastic and 74/83 (89.2%) non-dysplastic. For the subgroup of 100 diminutive (<5 mm) polyps, CAD correctly classified 87 (87%) polyps, 43/50 (86%) dysplastic and 44/50 (88%) non-dysplastic. There were not statistically significant differences in polyp histology prediction based on CAD system and on endoscopist assessment.
Conclusion: A computer vision system based on the characterization of the polyp surface in the white light accurately predicts colorectal polyp histology. |
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MV; 600.096; 600.119; 600.075 |
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Admin @ si @ SSB2019 |
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3164 |
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Bogdan Raducanu; Jordi Vitria |
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Online Nonparametric Discriminant Analysis for Incremental Subspace Learning and Recognition |
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2008 |
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Pattern Analysis and Applications. Special Issue: Non–Parametric Distance–Based Classification Techniques and Their Applications |
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11 |
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3-4 |
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259–268 |
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OR;MV |
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BCNPCL @ bcnpcl @ RaV2008c |
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997 |
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Fernando Vilariño; Panagiota Spyridonos; Fosca De Iorio; Jordi Vitria; Fernando Azpiroz; Petia Radeva |
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Intestinal Motility Assessment With Video Capsule Endoscopy: Automatic Annotation of Phasic Intestinal Contractions |
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2010 |
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IEEE Transactions on Medical Imaging |
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TMI |
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29 |
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2 |
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246-259 |
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Intestinal motility assessment with video capsule endoscopy arises as a novel and challenging clinical fieldwork. This technique is based on the analysis of the patterns of intestinal contractions shown in a video provided by an ingestible capsule with a wireless micro-camera. The manual labeling of all the motility events requires large amount of time for offline screening in search of findings with low prevalence, which turns this procedure currently unpractical. In this paper, we propose a machine learning system to automatically detect the phasic intestinal contractions in video capsule endoscopy, driving a useful but not feasible clinical routine into a feasible clinical procedure. Our proposal is based on a sequential design which involves the analysis of textural, color, and blob features together with SVM classifiers. Our approach tackles the reduction of the imbalance rate of data and allows the inclusion of domain knowledge as new stages in the cascade. We present a detailed analysis, both in a quantitative and a qualitative way, by providing several measures of performance and the assessment study of interobserver variability. Our system performs at 70% of sensitivity for individual detection, whilst obtaining equivalent patterns to those of the experts for density of contractions. |
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IEEE |
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0278-0062 |
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800 |
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MILAB;MV;OR;SIAI |
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BCNPCL @ bcnpcl @ VSD2010; IAM @ iam @ VSI2010 |
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1281 |
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F. Pla; Petia Radeva; Jordi Vitria |
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Non-parametric distance-based classification techniques and their applications |
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2008 |
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Pattern Analysis and Applications, Special Issue: Non–Parametric Distance–Based Classification Techniques and Their Applications |
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11 |
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3-4 |
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223–225 |
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Springer |
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OR;MILAB;MV |
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BCNPCL @ bcnpcl @ PRV2008 |
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999 |
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Carolina Malagelada; F.De Lorio; Santiago Segui; S. Mendez; Michal Drozdzal; Jordi Vitria; Petia Radeva; J.Santos; Anna Accarino; Juan R. Malagelada; Fernando Azpiroz |
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Functional gut disorders or disordered gut function? Small bowel dysmotility evidenced by an original technique |
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2012 |
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Neurogastroenterology & Motility |
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NEUMOT |
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24 |
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3 |
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223-230 |
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capsule endoscopy;computer vision analysis;machine learning technique;small bowel motility |
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JCR Impact Factor 2010: 3.349
Background This study aimed to determine the proportion of cases with abnormal intestinal motility among patients with functional bowel disorders. To this end, we applied an original method, previously developed in our laboratory, for analysis of endoluminal images obtained by capsule endoscopy. This novel technology is based on computer vision and machine learning techniques.
Methods The endoscopic capsule (Pillcam SB1; Given Imaging, Yokneam, Israel) was administered to 80 patients with functional bowel disorders and 70 healthy subjects. Endoluminal image analysis was performed with a computer vision program developed for the evaluation of contractile events (luminal occlusions and radial wrinkles), non-contractile patterns (open tunnel and smooth wall patterns), type of content (secretions, chyme) and motion of wall and contents. Normality range and discrimination of abnormal cases were established by a machine learning technique. Specifically, an iterative classifier (one-class support vector machine) was applied in a random population of 50 healthy subjects as a training set and the remaining subjects (20 healthy subjects and 80 patients) as a test set.
Key Results The classifier identified as abnormal 29% of patients with functional diseases of the bowel (23 of 80), and as normal 97% of healthy subjects (68 of 70) (P < 0.05 by chi-squared test). Patients identified as abnormal clustered in two groups, which exhibited either a hyper- or a hypodynamic motility pattern. The motor behavior was unrelated to clinical features.
Conclusions & Inferences With appropriate methodology, abnormal intestinal motility can be demonstrated in a significant proportion of patients with functional bowel disorders, implying a pathologic disturbance of gut physiology. |
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Wiley Online Library |
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MILAB; OR; MV |
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Admin @ si @ MLS2012 |
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1830 |
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