|
|
Santiago Segui, Michal Drozdzal, Fernando Vilariño, Carolina Malagelada, Fernando Azpiroz, Petia Radeva, et al. (2012). Categorization and Segmentation of Intestinal Content Frames for Wireless Capsule Endoscopy. TITB - IEEE Transactions on Information Technology in Biomedicine, 16(6), 1341–1352.
Abstract: Wireless capsule endoscopy (WCE) is a device that allows the direct visualization of gastrointestinal tract with minimal discomfort for the patient, but at the price of a large amount of time for screening. In order to reduce this time, several works have proposed to automatically remove all the frames showing intestinal content. These methods label frames as {intestinal content – clear} without discriminating between types of content (with different physiological meaning) or the portion of image covered. In addition, since the presence of intestinal content has been identified as an indicator of intestinal motility, its accurate quantification can show a potential clinical relevance. In this paper, we present a method for the robust detection and segmentation of intestinal content in WCE images, together with its further discrimination between turbid liquid and bubbles. Our proposal is based on a twofold system. First, frames presenting intestinal content are detected by a support vector machine classifier using color and textural information. Second, intestinal content frames are segmented into {turbid, bubbles, and clear} regions. We show a detailed validation using a large dataset. Our system outperforms previous methods and, for the first time, discriminates between turbid from bubbles media.
|
|
|
|
Santiago Segui, Michal Drozdzal, Guillem Pascual, Petia Radeva, Carolina Malagelada, Fernando Azpiroz, et al. (2016). Generic Feature Learning for Wireless Capsule Endoscopy Analysis. CBM - Computers in Biology and Medicine, 79, 163–172.
Abstract: The interpretation and analysis of wireless capsule endoscopy (WCE) recordings is a complex task which requires sophisticated computer aided decision (CAD) systems to help physicians with video screening and, finally, with the diagnosis. Most CAD systems used in capsule endoscopy share a common system design, but use very different image and video representations. As a result, each time a new clinical application of WCE appears, a new CAD system has to be designed from the scratch. This makes the design of new CAD systems very time consuming. Therefore, in this paper we introduce a system for small intestine motility characterization, based on Deep Convolutional Neural Networks, which circumvents the laborious step of designing specific features for individual motility events. Experimental results show the superiority of the learned features over alternative classifiers constructed using state-of-the-art handcrafted features. In particular, it reaches a mean classification accuracy of 96% for six intestinal motility events, outperforming the other classifiers by a large margin (a 14% relative performance increase).
Keywords: Wireless capsule endoscopy; Deep learning; Feature learning; Motility analysis
|
|
|
|
Sergio Escalera. (2013). Multi-Modal Human Behaviour Analysis from Visual Data Sources. ERCIM - ERCIM News journal, 21–22.
Abstract: The Human Pose Recovery and Behaviour Analysis group (HuPBA), University of Barcelona, is developing a line of research on multi-modal analysis of humans in visual data. The novel technology is being applied in several scenarios with high social impact, including sign language recognition, assisted technology and supported diagnosis for the elderly and people with mental/physical disabilities, fitness conditioning, and Human Computer Interaction.
|
|
|
|
Sergio Escalera, Alicia Fornes, O. Pujol, Petia Radeva, Gemma Sanchez, & Josep Llados. (2009). Blurred Shape Model for Binary and Grey-level Symbol Recognition. PRL - Pattern Recognition Letters, 30(15), 1424–1433.
Abstract: Many symbol recognition problems require the use of robust descriptors in order to obtain rich information of the data. However, the research of a good descriptor is still an open issue due to the high variability of symbols appearance. Rotation, partial occlusions, elastic deformations, intra-class and inter-class variations, or high variability among symbols due to different writing styles, are just a few problems. In this paper, we introduce a symbol shape description to deal with the changes in appearance that these types of symbols suffer. The shape of the symbol is aligned based on principal components to make the recognition invariant to rotation and reflection. Then, we present the Blurred Shape Model descriptor (BSM), where new features encode the probability of appearance of each pixel that outlines the symbols shape. Moreover, we include the new descriptor in a system to deal with multi-class symbol categorization problems. Adaboost is used to train the binary classifiers, learning the BSM features that better split symbol classes. Then, the binary problems are embedded in an Error-Correcting Output Codes framework (ECOC) to deal with the multi-class case. The methodology is evaluated on different synthetic and real data sets. State-of-the-art descriptors and classifiers are compared, showing the robustness and better performance of the present scheme to classify symbols with high variability of appearance.
|
|
|
|
Sergio Escalera, Alicia Fornes, Oriol Pujol, Josep Llados, & Petia Radeva. (2011). Circular Blurred Shape Model for Multiclass Symbol Recognition. TSMCB - IEEE Transactions on Systems, Man and Cybernetics (Part B) (IEEE), 41(2), 497–506.
Abstract: In this paper, we propose a circular blurred shape model descriptor to deal with the problem of symbol detection and classification as a particular case of object recognition. The feature extraction is performed by capturing the spatial arrangement of significant object characteristics in a correlogram structure. The shape information from objects is shared among correlogram regions, where a prior blurring degree defines the level of distortion allowed in the symbol, making the descriptor tolerant to irregular deformations. Moreover, the descriptor is rotation invariant by definition. We validate the effectiveness of the proposed descriptor in both the multiclass symbol recognition and symbol detection domains. In order to perform the symbol detection, the descriptors are learned using a cascade of classifiers. In the case of multiclass categorization, the new feature space is learned using a set of binary classifiers which are embedded in an error-correcting output code design. The results over four symbol data sets show the significant improvements of the proposed descriptor compared to the state-of-the-art descriptors. In particular, the results are even more significant in those cases where the symbols suffer from elastic deformations.
|
|
