@Misc{SpyridonBakas2018, author="Spyridon Bakas and Mauricio Reyes and Andras Jakab and Stefan Bauer and Markus Rempfler and Alessandro Crimi and Russell Takeshi Shinohara and Christoph Berger and Sung Min Ha and Martin Rozycki and Marcel Prastawa and Esther Alberts and Jana Lipkova and John Freymann and Justin Kirby and Michel Bilello and Hassan Fathallah-Shaykh and Roland Wiest and Jan Kirschke and Benedikt Wiestler and Rivka Colen and Aikaterini Kotrotsou and Pamela Lamontagne and Daniel Marcus and Mikhail Milchenko and Arash Nazeri and Marc-Andre Weber and Abhishek Mahajan and Ujjwal Baid and Dongjin Kwon and Manu Agarwal and Mahbubul Alam and Alberto Albiol and Antonio Albiol and Varghese Alex and Tuan Anh Tran and Tal Arbel and Aaron Avery and Subhashis Banerjee and Thomas Batchelder and Kayhan Batmanghelich and Enzo Battistella and Martin Bendszus and Eze Benson and Jose Bernal and George Biros and Mariano Cabezas and Siddhartha Chandra and Yi-Ju Chang and Joseph Chazalon and Shengcong Chen and Wei Chen and Jefferson Chen and Kun Cheng and Meinel Christoph and Roger Chylla and Albert Cl{\'e}rigues and Anthony Costa and Xiaomeng Cui and Zhenzhen Dai and Lutao Dai and Eric Deutsch and Changxing Ding and Chao Dong and Wojciech Dudzik and Theo Estienne and Hyung Eun Shin and Richard Everson and Jonathan Fabrizio and Longwei Fang and Xue Feng and Lucas Fidon and Naomi Fridman and Huan Fu and David Fuentes and David G Gering and Yaozong Gao and Evan Gates and Amir Gholami and Mingming Gong and Sandra Gonzalez-Villa and J Gregory Pauloski and Yuanfang Guan and Sheng Guo and Sudeep Gupta and Meenakshi H Thakur and Klaus H Maier-Hein and Woo-Sup Han and Huiguang He and Aura Hernandez-Sabate and Evelyn Herrmann and Naveen Himthani and Winston Hsu and Cheyu Hsu and Xiaojun Hu and Xiaobin Hu and Yan Hu and Yifan Hu and Rui Hua", title="Identifying the best machine learning algorithms for brain tumor segmentation, progression assessment, and overall survival prediction in the BRATS challenge", year="2018", optkeywords="BraTS", optkeywords="challenge", optkeywords="brain", optkeywords="tumor", optkeywords="segmentation", optkeywords="machine learning", optkeywords="glioma", optkeywords="glioblastoma", optkeywords="radiomics", optkeywords="survival", optkeywords="progression", optkeywords="RECIST", abstract="Gliomas are the most common primary brain malignancies, with different degrees of aggressiveness, variable prognosis and various heterogeneous histologic sub-regions, i.e., peritumoral edematous/invaded tissue, necrotic core, active and non-enhancing core. This intrinsic heterogeneity is also portrayed in their radio-phenotype, as their sub-regions are depicted by varying intensity profiles disseminated across multiparametric magnetic resonance imaging (mpMRI) scans, reflecting varying biological properties. Their heterogeneous shape, extent, and location are some of the factors that make these tumors difficult to resect, and in some cases inoperable. The amount of resected tumor is a factor also considered in longitudinal scans, when evaluating the apparent tumor for potential diagnosis of progression. Furthermore, there is mounting evidence that accurate segmentation of the various tumor sub-regions can offer the basis for quantitative image analysis towards prediction of patient overall survival. This study assesses the state-of-the-art machine learning (ML) methods used for brain tumor image analysis in mpMRI scans, during the last seven instances of the International Brain Tumor Segmentation (BraTS) challenge, i.e. 2012-2018. Specifically, we focus on i) evaluating segmentations of the various glioma sub-regions in preoperative mpMRI scans, ii) assessing potential tumor progression by virtue of longitudinal growth of tumor sub-regions, beyond use of the RECIST criteria, and iii) predicting the overall survival from pre-operative mpMRI scans of patients that undergone gross total resection. Finally, we investigate the challenge of identifying the best ML algorithms for each of these tasks, considering that apart from being diverse on each instance of the challenge, the multi-institutional mpMRI BraTS dataset has also been a continuously evolving/growing dataset.", optnote="ADAS; 600.118", optnote="exported from refbase (http://refbase.cvc.uab.es/show.php?record=3252), last updated on Thu, 28 Jan 2021 10:31:08 +0100" }