Abstract: Effective conservation actions require effective population monitoring. However, accurately counting animals in the wild to inform conservation decision-making is difficult. Monitoring populations through image sampling has made data collection cheaper, wide-reaching and less intrusive but created a need to process and analyse this data efficiently. Counting animals from such data is challenging, particularly when densely packed in noisy images. Attempting this manually is slow and expensive, while traditional computer vision methods are limited in their generalisability. Deep learning is the state-of-the-art method for many computer vision tasks, but it has yet to be properly explored to count animals. To this end, we employ deep learning, with a density-based regression approach, to count fish in low-resolution sonar images. We introduce a large dataset of sonar videos, deployed to record wild Lebranche mullet schools (Mugil liza), with a subset of 500 labelled images. We utilise abundant unlabelled data in a self-supervised task to improve the supervised counting task. For the first time in this context, by introducing uncertainty quantification, we improve model training and provide an accompanying measure of prediction uncertainty for more informed biological decision-making. Finally, we demonstrate the generalisability of our proposed counting framework through testing it on a recent benchmark dataset of high-resolution annotated underwater images from varying habitats (DeepFish). From experiments on both contrasting datasets, we demonstrate our network outperforms the few other deep learning models implemented for solving this task. By providing an open-source framework along with training data, our study puts forth an efficient deep learning template for crowd counting aquatic animals thereby contributing effective methods to assess natural populations from the ever-increasing visual data.

Abstract: Deployments of real-world object detection systems often experience a degradation in performance over time due to concept drift. Systems that leverage thermal cameras are especially susceptible because the respective thermal signatures of objects and their surroundings are highly sensitive to environmental changes. In this study, two types of weather-aware latent conditioning methods are investigated. The proposed method aims to guide two object detectors, (YOLOv5 and Deformable DETR) to become weather-aware. This is achieved by leveraging an auxiliary branch that predicts weather-related information while conditioning intermediate layers of the object detector. While the conditioning methods proposed do not directly improve the accuracy of baseline detectors, it can be observed that conditioned networks manage to extract a weather-related signal from the thermal images, thus resulting in a decreased miss rate at the cost of increased false positives. The extracted signal appears noisy and is thus challenging to regress accurately. This is most likely a result of the qualitative nature of the thermal sensor; thus, further work is needed to identify an ideal method for optimizing the conditioning branch, as well as to further improve the accuracy of the system.