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Author |
Laura Igual; Joan Carles Soliva; Antonio Hernandez; Sergio Escalera; Xavier Jimenez ; Oscar Vilarroya; Petia Radeva |
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Title |
A fully-automatic caudate nucleus segmentation of brain MRI: Application in volumetric analysis of pediatric attention-deficit/hyperactivity disorder |
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Journal Article |
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Year  |
2011 |
Publication |
BioMedical Engineering Online |
Abbreviated Journal |
BEO |
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Volume |
10 |
Issue |
105 |
Pages |
1-23 |
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Keywords |
Brain caudate nucleus; segmentation; MRI; atlas-based strategy; Graph Cut framework |
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Abstract |
Background
Accurate automatic segmentation of the caudate nucleus in magnetic resonance images (MRI) of the brain is of great interest in the analysis of developmental disorders. Segmentation methods based on a single atlas or on multiple atlases have been shown to suitably localize caudate structure. However, the atlas prior information may not represent the structure of interest correctly. It may therefore be useful to introduce a more flexible technique for accurate segmentations.
Method
We present Cau-dateCut: a new fully-automatic method of segmenting the caudate nucleus in MRI. CaudateCut combines an atlas-based segmentation strategy with the Graph Cut energy-minimization framework. We adapt the Graph Cut model to make it suitable for segmenting small, low-contrast structures, such as the caudate nucleus, by defining new energy function data and boundary potentials. In particular, we exploit information concerning the intensity and geometry, and we add supervised energies based on contextual brain structures. Furthermore, we reinforce boundary detection using a new multi-scale edgeness measure.
Results
We apply the novel CaudateCut method to the segmentation of the caudate nucleus to a new set of 39 pediatric attention-deficit/hyperactivity disorder (ADHD) patients and 40 control children, as well as to a public database of 18 subjects. We evaluate the quality of the segmentation using several volumetric and voxel by voxel measures. Our results show improved performance in terms of segmentation compared to state-of-the-art approaches, obtaining a mean overlap of 80.75%. Moreover, we present a quantitative volumetric analysis of caudate abnormalities in pediatric ADHD, the results of which show strong correlation with expert manual analysis.
Conclusion
CaudateCut generates segmentation results that are comparable to gold-standard segmentations and which are reliable in the analysis of differentiating neuroanatomical abnormalities between healthy controls and pediatric ADHD. |
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1475-925X |
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MILAB;HuPBA |
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no |
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Admin @ si @ ISH2011 |
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1882 |
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Author |
Maria Salamo; Sergio Escalera |
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Title |
Increasing Retrieval Quality in Conversational Recommenders |
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Journal Article |
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Year |
2011 |
Publication |
IEEE Transactions on Knowledge and Data Engineering |
Abbreviated Journal |
TKDE |
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Volume |
99 |
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Pages |
1-1 |
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IF JCR CCIA 2.286 2009 24/103
JCR Impact Factor 2010: 1.851
A major task of research in conversational recommender systems is personalization. Critiquing is a common and powerful form of feedback, where a user can express her feature preferences by applying a series of directional critiques over the recommendations instead of providing specific preference values. Incremental Critiquing is a conversational recommender system that uses critiquing as a feedback to efficiently personalize products. The expectation is that in each cycle the system retrieves the products that best satisfy the user’s soft product preferences from a minimal information input. In this paper, we present a novel technique that increases retrieval quality based on a combination of compatibility and similarity scores. Under the hypothesis that a user learns Turing the recommendation process, we propose two novel exponential reinforcement learning approaches for compatibility that take into account both the instant at which the user makes a critique and the number of satisfied critiques. Moreover, we consider that the impact of features on the similarity differs according to the preferences manifested by the user. We propose a global weighting approach that uses a common weight for nearest cases in order to focus on groups of relevant products. We show that our methodology significantly improves recommendation efficiency in four data sets of different sizes in terms of session length in comparison with state-of-the-art approaches. Moreover, our recommender shows higher robustness against noisy user data when compared to classical approaches |
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IEEE |
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1041-4347 |
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MILAB; HuPBA |
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Admin @ si @ SaE2011 |
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1713 |
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Author |
Miguel Angel Bautista; Sergio Escalera; Xavier Baro; Petia Radeva; Jordi Vitria; Oriol Pujol |
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Title |
Minimal Design of Error-Correcting Output Codes |
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Journal Article |
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Year |
2011 |
Publication |
Pattern Recognition Letters |
Abbreviated Journal |
PRL |
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33 |
Issue |
6 |
Pages |
693-702 |
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Multi-class classification; Error-correcting output codes; Ensemble of classifiers |
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IF JCR CCIA 1.303 2009 54/103
The classification of large number of object categories is a challenging trend in the pattern recognition field. In literature, this is often addressed using an ensemble of classifiers. In this scope, the Error-correcting output codes framework has demonstrated to be a powerful tool for combining classifiers. However, most state-of-the-art ECOC approaches use a linear or exponential number of classifiers, making the discrimination of a large number of classes unfeasible. In this paper, we explore and propose a minimal design of ECOC in terms of the number of classifiers. Evolutionary computation is used for tuning the parameters of the classifiers and looking for the best minimal ECOC code configuration. The results over several public UCI datasets and different multi-class computer vision problems show that the proposed methodology obtains comparable (even better) results than state-of-the-art ECOC methodologies with far less number of dichotomizers. |
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Elsevier |
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0167-8655 |
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MILAB; OR;HuPBA;MV |
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Call Number |
Admin @ si @ BEB2011a |
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1800 |
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Author |
Sergio Escalera; Alicia Fornes; Oriol Pujol; Josep Llados; Petia Radeva |
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Title |
Circular Blurred Shape Model for Multiclass Symbol Recognition |
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Journal Article |
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Year |
2011 |
Publication |
IEEE Transactions on Systems, Man and Cybernetics (Part B) (IEEE) |
Abbreviated Journal |
TSMCB |
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Volume |
41 |
Issue |
2 |
Pages |
497-506 |
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In this paper, we propose a circular blurred shape model descriptor to deal with the problem of symbol detection and classification as a particular case of object recognition. The feature extraction is performed by capturing the spatial arrangement of significant object characteristics in a correlogram structure. The shape information from objects is shared among correlogram regions, where a prior blurring degree defines the level of distortion allowed in the symbol, making the descriptor tolerant to irregular deformations. Moreover, the descriptor is rotation invariant by definition. We validate the effectiveness of the proposed descriptor in both the multiclass symbol recognition and symbol detection domains. In order to perform the symbol detection, the descriptors are learned using a cascade of classifiers. In the case of multiclass categorization, the new feature space is learned using a set of binary classifiers which are embedded in an error-correcting output code design. The results over four symbol data sets show the significant improvements of the proposed descriptor compared to the state-of-the-art descriptors. In particular, the results are even more significant in those cases where the symbols suffer from elastic deformations. |
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1083-4419 |
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Notes |
MILAB; DAG;HuPBA |
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no |
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Call Number |
Admin @ si @ EFP2011 |
Serial |
1784 |
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Author |
Sergio Escalera; Ana Puig; Oscar Amoros; Maria Salamo |
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Title |
Intelligent GPGPU Classification in Volume Visualization: a framework based on Error-Correcting Output Codes |
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Journal Article |
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Year |
2011 |
Publication |
Computer Graphics Forum |
Abbreviated Journal |
CGF |
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Volume |
30 |
Issue |
7 |
Pages |
2107-2115 |
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Abstract |
IF JCR 1.455 2010 25/99
In volume visualization, the definition of the regions of interest is inherently an iterative trial-and-error process finding out the best parameters to classify and render the final image. Generally, the user requires a lot of expertise to analyze and edit these parameters through multi-dimensional transfer functions. In this paper, we present a framework of intelligent methods to label on-demand multiple regions of interest. These methods can be split into a two-level GPU-based labelling algorithm that computes in time of rendering a set of labelled structures using the Machine Learning Error-Correcting Output Codes (ECOC) framework. In a pre-processing step, ECOC trains a set of Adaboost binary classifiers from a reduced pre-labelled data set. Then, at the testing stage, each classifier is independently applied on the features of a set of unlabelled samples and combined to perform multi-class labelling. We also propose an alternative representation of these classifiers that allows to highly parallelize the testing stage. To exploit that parallelism we implemented the testing stage in GPU-OpenCL. The empirical results on different data sets for several volume structures shows high computational performance and classification accuracy. |
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MILAB; HuPBA |
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Call Number |
Admin @ si @ EPA2011 |
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1881 |
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