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Debora Gil; Oriol Ramos Terrades; Raquel Perez |

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Title |
Topological Radiomics (TOPiomics): Early Detection of Genetic Abnormalities in Cancer Treatment Evolution |
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2021 |
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Extended Abstracts GEOMVAP 2019, Trends in Mathematics 15 |
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15 |
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89–93 |
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Abnormalities in radiomic measures correlate to genomic alterations prone to alter the outcome of personalized anti-cancer treatments. TOPiomics is a new method for the early detection of variations in tumor imaging phenotype from a topological structure in multi-view radiomic spaces. |
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Springer Nature |
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IAM; DAG; 600.120; 600.145; 600.139 |
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Admin @ si @ GRP2021 |
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3594 |
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Author |
Pau Riba; Andreas Fischer; Josep Llados; Alicia Fornes |


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Learning graph edit distance by graph neural networks |
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2021 |
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Pattern Recognition |
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PR |
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120 |
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108132 |
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The emergence of geometric deep learning as a novel framework to deal with graph-based representations has faded away traditional approaches in favor of completely new methodologies. In this paper, we propose a new framework able to combine the advances on deep metric learning with traditional approximations of the graph edit distance. Hence, we propose an efficient graph distance based on the novel field of geometric deep learning. Our method employs a message passing neural network to capture the graph structure, and thus, leveraging this information for its use on a distance computation. The performance of the proposed graph distance is validated on two different scenarios. On the one hand, in a graph retrieval of handwritten words i.e. keyword spotting, showing its superior performance when compared with (approximate) graph edit distance benchmarks. On the other hand, demonstrating competitive results for graph similarity learning when compared with the current state-of-the-art on a recent benchmark dataset. |
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DAG; 600.140; 600.121 |
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Admin @ si @ RFL2021 |
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3611 |
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Author |
Lei Kang; Pau Riba; Marcal Rusinol; Alicia Fornes; Mauricio Villegas |


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Content and Style Aware Generation of Text-line Images for Handwriting Recognition |
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2021 |
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IEEE Transactions on Pattern Analysis and Machine Intelligence |
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TPAMI |
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Handwritten Text Recognition has achieved an impressive performance in public benchmarks. However, due to the high inter- and intra-class variability between handwriting styles, such recognizers need to be trained using huge volumes of manually labeled training data. To alleviate this labor-consuming problem, synthetic data produced with TrueType fonts has been often used in the training loop to gain volume and augment the handwriting style variability. However, there is a significant style bias between synthetic and real data which hinders the improvement of recognition performance. To deal with such limitations, we propose a generative method for handwritten text-line images, which is conditioned on both visual appearance and textual content. Our method is able to produce long text-line samples with diverse handwriting styles. Once properly trained, our method can also be adapted to new target data by only accessing unlabeled text-line images to mimic handwritten styles and produce images with any textual content. Extensive experiments have been done on making use of the generated samples to boost Handwritten Text Recognition performance. Both qualitative and quantitative results demonstrate that the proposed approach outperforms the current state of the art. |
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DAG; 600.140; 600.121 |
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Admin @ si @ KRR2021 |
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3612 |
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Author |
S.K. Jemni; Mohamed Ali Souibgui; Yousri Kessentini; Alicia Fornes |

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Title |
Enhance to Read Better: A Multi-Task Adversarial Network for Handwritten Document Image Enhancement |
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Journal Article |
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2022 |
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Pattern Recognition |
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PR |
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123 |
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108370 |
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Handwritten document images can be highly affected by degradation for different reasons: Paper ageing, daily-life scenarios (wrinkles, dust, etc.), bad scanning process and so on. These artifacts raise many readability issues for current Handwritten Text Recognition (HTR) algorithms and severely devalue their efficiency. In this paper, we propose an end to end architecture based on Generative Adversarial Networks (GANs) to recover the degraded documents into a and form. Unlike the most well-known document binarization methods, which try to improve the visual quality of the degraded document, the proposed architecture integrates a handwritten text recognizer that promotes the generated document image to be more readable. To the best of our knowledge, this is the first work to use the text information while binarizing handwritten documents. Extensive experiments conducted on degraded Arabic and Latin handwritten documents demonstrate the usefulness of integrating the recognizer within the GAN architecture, which improves both the visual quality and the readability of the degraded document images. Moreover, we outperform the state of the art in H-DIBCO challenges, after fine tuning our pre-trained model with synthetically degraded Latin handwritten images, on this task. |
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DAG; 600.124; 600.121; 602.230 |
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Admin @ si @ JSK2022 |
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3613 |
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Author |
Lluis Gomez; Ali Furkan Biten; Ruben Tito; Andres Mafla; Marçal Rusiñol; Ernest Valveny; Dimosthenis Karatzas |


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Multimodal grid features and cell pointers for scene text visual question answering |
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Journal Article |
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2021 |
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Pattern Recognition Letters |
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PRL |
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150 |
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242-249 |
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This paper presents a new model for the task of scene text visual question answering. In this task questions about a given image can only be answered by reading and understanding scene text. Current state of the art models for this task make use of a dual attention mechanism in which one attention module attends to visual features while the other attends to textual features. A possible issue with this is that it makes difficult for the model to reason jointly about both modalities. To fix this problem we propose a new model that is based on an single attention mechanism that attends to multi-modal features conditioned to the question. The output weights of this attention module over a grid of multi-modal spatial features are interpreted as the probability that a certain spatial location of the image contains the answer text to the given question. Our experiments demonstrate competitive performance in two standard datasets with a model that is faster than previous methods at inference time. Furthermore, we also provide a novel analysis of the ST-VQA dataset based on a human performance study. Supplementary material, code, and data is made available through this link. |
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DAG; 600.084; 600.121 |
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Admin @ si @ GBT2021 |
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3620 |
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Author |
Minesh Mathew; Lluis Gomez; Dimosthenis Karatzas; C.V. Jawahar |


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Asking questions on handwritten document collections |
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Journal Article |
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2021 |
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International Journal on Document Analysis and Recognition |
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IJDAR |
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24 |
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235-249 |
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This work addresses the problem of Question Answering (QA) on handwritten document collections. Unlike typical QA and Visual Question Answering (VQA) formulations where the answer is a short text, we aim to locate a document snippet where the answer lies. The proposed approach works without recognizing the text in the documents. We argue that the recognition-free approach is suitable for handwritten documents and historical collections where robust text recognition is often difficult. At the same time, for human users, document image snippets containing answers act as a valid alternative to textual answers. The proposed approach uses an off-the-shelf deep embedding network which can project both textual words and word images into a common sub-space. This embedding bridges the textual and visual domains and helps us retrieve document snippets that potentially answer a question. We evaluate results of the proposed approach on two new datasets: (i) HW-SQuAD: a synthetic, handwritten document image counterpart of SQuAD1.0 dataset and (ii) BenthamQA: a smaller set of QA pairs defined on documents from the popular Bentham manuscripts collection. We also present a thorough analysis of the proposed recognition-free approach compared to a recognition-based approach which uses text recognized from the images using an OCR. Datasets presented in this work are available to download at docvqa.org. |
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DAG; 600.121 |
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Admin @ si @ MGK2021 |
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3621 |
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Author |
Ruben Tito; Dimosthenis Karatzas; Ernest Valveny |


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Title |
Document Collection Visual Question Answering |
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Year |
2021 |
Publication |
16th International Conference on Document Analysis and Recognition |
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12822 |
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778-792 |
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Document collection; Visual Question Answering |
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Current tasks and methods in Document Understanding aims to process documents as single elements. However, documents are usually organized in collections (historical records, purchase invoices), that provide context useful for their interpretation. To address this problem, we introduce Document Collection Visual Question Answering (DocCVQA) a new dataset and related task, where questions are posed over a whole collection of document images and the goal is not only to provide the answer to the given question, but also to retrieve the set of documents that contain the information needed to infer the answer. Along with the dataset we propose a new evaluation metric and baselines which provide further insights to the new dataset and task. |
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ICDAR |
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DAG; 600.121 |
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Admin @ si @ TKV2021 |
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3622 |
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Author |
Pau Riba; Sounak Dey; Ali Furkan Biten; Josep Llados |

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Localizing Infinity-shaped fishes: Sketch-guided object localization in the wild |
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Miscellaneous |
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2021 |
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Arxiv |
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This work investigates the problem of sketch-guided object localization (SGOL), where human sketches are used as queries to conduct the object localization in natural images. In this cross-modal setting, we first contribute with a tough-to-beat baseline that without any specific SGOL training is able to outperform the previous works on a fixed set of classes. The baseline is useful to analyze the performance of SGOL approaches based on available simple yet powerful methods. We advance prior arts by proposing a sketch-conditioned DETR (DEtection TRansformer) architecture which avoids a hard classification and alleviates the domain gap between sketches and images to localize object instances. Although the main goal of SGOL is focused on object detection, we explored its natural extension to sketch-guided instance segmentation. This novel task allows to move towards identifying the objects at pixel level, which is of key importance in several applications. We experimentally demonstrate that our model and its variants significantly advance over previous state-of-the-art results. All training and testing code of our model will be released to facilitate future researchhttps://github.com/priba/sgol_wild. |
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DAG; 600.121 |
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Admin @ si @ RDB2021 |
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3674 |
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Author |
Mohamed Ali Souibgui; Alicia Fornes; Yousri Kessentini; Beata Megyesi |

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Title |
Few shots are all you need: A progressive learning approach for low resource handwritten text recognition |
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Year |
2022 |
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Pattern Recognition Letters |
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PRL |
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160 |
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43-49 |
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Handwritten text recognition in low resource scenarios, such as manuscripts with rare alphabets, is a challenging problem. In this paper, we propose a few-shot learning-based handwriting recognition approach that significantly reduces the human annotation process, by requiring only a few images of each alphabet symbols. The method consists of detecting all the symbols of a given alphabet in a textline image and decoding the obtained similarity scores to the final sequence of transcribed symbols. Our model is first pretrained on synthetic line images generated from an alphabet, which could differ from the alphabet of the target domain. A second training step is then applied to reduce the gap between the source and the target data. Since this retraining would require annotation of thousands of handwritten symbols together with their bounding boxes, we propose to avoid such human effort through an unsupervised progressive learning approach that automatically assigns pseudo-labels to the unlabeled data. The evaluation on different datasets shows that our model can lead to competitive results with a significant reduction in human effort. The code will be publicly available in the following repository: https://github.com/dali92002/HTRbyMatching |
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Elsevier |
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DAG; 600.121; 600.162; 602.230 |
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Admin @ si @ SFK2022 |
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3736 |
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Author |
Arnau Baro |

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Reading Music Systems: From Deep Optical Music Recognition to Contextual Methods |
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2022 |
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PhD Thesis, Universitat Autonoma de Barcelona-CVC |
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The transcription of sheet music into some machine-readable format can be carried out manually. However, the complexity of music notation inevitably leads to burdensome software for music score editing, which makes the whole process
very time-consuming and prone to errors. Consequently, automatic transcription
systems for musical documents represent interesting tools.
Document analysis is the subject that deals with the extraction and processing
of documents through image and pattern recognition. It is a branch of computer
vision. Taking music scores as source, the field devoted to address this task is
known as Optical Music Recognition (OMR). Typically, an OMR system takes an
image of a music score and automatically extracts its content into some symbolic
structure such as MEI or MusicXML.
In this dissertation, we have investigated different methods for recognizing a
single staff section (e.g. scores for violin, flute, etc.), much in the same way as most text recognition research focuses on recognizing words appearing in a given line image. These methods are based in two different methodologies. On the one hand, we present two methods based on Recurrent Neural Networks, in particular, the
Long Short-Term Memory Neural Network. On the other hand, a method based on Sequence to Sequence models is detailed.
Music context is needed to improve the OMR results, just like language models
and dictionaries help in handwriting recognition. For example, syntactical rules
and grammars could be easily defined to cope with the ambiguities in the rhythm.
In music theory, for example, the time signature defines the amount of beats per
bar unit. Thus, in the second part of this dissertation, different methodologies
have been investigated to improve the OMR recognition. We have explored three
different methods: (a) a graphic tree-structure representation, Dendrograms, that
joins, at each level, its primitives following a set of rules, (b) the incorporation of Language Models to model the probability of a sequence of tokens, and (c) graph neural networks to analyze the music scores to avoid meaningless relationships between music primitives.
Finally, to train all these methodologies, and given the method-specificity of
the datasets in the literature, we have created four different music datasets. Two of them are synthetic with a modern or old handwritten appearance, whereas the
other two are real handwritten scores, being one of them modern and the other
old. |
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Ph.D. thesis |
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IMPRIMA |
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Alicia Fornes |
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978-84-124793-8-6 |
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DAG; |
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Admin @ si @ Bar2022 |
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3754 |
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