| |
Records |
Links |
|
Author |
Carles Sanchez; Jorge Bernal; Debora Gil; F. Javier Sanchez |
|
| |
Title |
On-line lumen centre detection in gastrointestinal and respiratory endoscopy |
Type |
Conference Article |
| |
Year |
2013 |
Publication |
Second International Workshop Clinical Image-Based Procedures |
Abbreviated Journal |
|
|
| |
Volume |
8361 |
Issue |
|
Pages |
31-38 |
|
| |
Keywords |
Lumen centre detection; Bronchoscopy; Colonoscopy |
|
| |
Abstract |
We present in this paper a novel lumen centre detection for gastrointestinal and respiratory endoscopic images. The proposed method is based on the appearance and geometry of the lumen, which we defined as the darkest image region which centre is a hub of image gradients. Experimental results validated on the first public annotated gastro-respiratory database prove the reliability of the method for a wide range of images (with precision over 95 %). |
|
| |
Address |
Nagoya; Japan; September 2013 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher  |
Springer International Publishing |
Place of Publication |
|
Editor |
Erdt, Marius and Linguraru, Marius George and Oyarzun Laura, Cristina and Shekhar, Raj and Wesarg, Stefan and González Ballester, Miguel Angel and Drechsler, Klaus |
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
978-3-319-05665-4 |
Medium |
|
|
| |
Area |
800 |
Expedition |
|
Conference |
CLIP |
|
| |
Notes |
MV; IAM; 600.047; 600.044; 600.060 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ SBG2013 |
Serial |
2302 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Patricia Marquez; H. Kause; A. Fuster; Aura Hernandez-Sabate; L. Florack; Debora Gil; Hans van Assen |
|
| |
Title |
Factors Affecting Optical Flow Performance in Tagging Magnetic Resonance Imaging |
Type |
Conference Article |
| |
Year |
2014 |
Publication |
17th International Conference on Medical Image Computing and Computer Assisted Intervention |
Abbreviated Journal |
|
|
| |
Volume |
8896 |
Issue |
|
Pages |
231-238 |
|
| |
Keywords |
Optical flow; Performance Evaluation; Synthetic Database; ANOVA; Tagging Magnetic Resonance Imaging |
|
| |
Abstract |
Changes in cardiac deformation patterns are correlated with cardiac pathologies. Deformation can be extracted from tagging Magnetic Resonance Imaging (tMRI) using Optical Flow (OF) techniques. For applications of OF in a clinical setting it is important to assess to what extent the performance of a particular OF method is stable across di erent clinical acquisition artifacts. This paper presents a statistical validation framework, based on ANOVA, to assess the motion and appearance factors that have the largest in uence on OF accuracy drop.
In order to validate this framework, we created a database of simulated tMRI data including the most common artifacts of MRI and test three di erent OF methods, including HARP. |
|
| |
Address |
Boston; USA; September 2014 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer International Publishing |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0302-9743 |
ISBN |
978-3-319-14677-5 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
STACOM |
|
| |
Notes |
IAM; ADAS; 600.060; 601.145; 600.076; 600.075 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ MKF2014 |
Serial |
2495 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Jorge Bernal; Debora Gil; Carles Sanchez; F. Javier Sanchez |
|
| |
Title |
Discarding Non Informative Regions for Efficient Colonoscopy Image Analysis |
Type |
Conference Article |
| |
Year |
2014 |
Publication |
1st MICCAI Workshop on Computer-Assisted and Robotic Endoscopy |
Abbreviated Journal |
|
|
| |
Volume |
8899 |
Issue |
|
Pages |
1-10 |
|
| |
Keywords |
Image Segmentation; Polyps, Colonoscopy; Valley Information; Energy Maps |
|
| |
Abstract |
In this paper we present a novel polyp region segmentation method for colonoscopy videos. Our method uses valley information associated to polyp boundaries in order to provide an initial segmentation. This first segmentation is refined to eliminate boundary discontinuities caused by image artifacts or other elements of the scene. Experimental results over a publicly annotated database show that our method outperforms both general and specific segmentation methods by providing more accurate regions rich in polyp content. We also prove how image preprocessing is needed to improve final polyp region segmentation. |
|
| |
Address |
Boston; USA; September 2014 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer International Publishing |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0302-9743 |
ISBN |
978-3-319-13409-3 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
CARE |
|
| |
Notes |
MV; IAM; 600.044; 600.047; 600.060; 600.075 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ BGS2014b |
Serial |
2503 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Francesco Brughi; Debora Gil; Llorenç Badiella; Eva Jove Casabella; Oriol Ramos Terrades |
|
| |
Title |
Exploring the impact of inter-query variability on the performance of retrieval systems |
Type |
Conference Article |
| |
Year |
2014 |
Publication |
11th International Conference on Image Analysis and Recognition |
Abbreviated Journal |
|
|
| |
Volume |
8814 |
Issue |
|
Pages |
413–420 |
|
| |
Keywords |
|
|
| |
Abstract |
This paper introduces a framework for evaluating the performance of information retrieval systems. Current evaluation metrics provide an average score that does not consider performance variability across the query set. In this manner, conclusions lack of any statistical significance, yielding poor inference to cases outside the query set and possibly unfair comparisons. We propose to apply statistical methods in order to obtain a more informative measure for problems in which different query classes can be identified. In this context, we assess the performance variability on two levels: overall variability across the whole query set and specific query class-related variability. To this end, we estimate confidence bands for precision-recall curves, and we apply ANOVA in order to assess the significance of the performance across different query classes. |
|
| |
Address |
Algarve; Portugal; October 2014 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer International Publishing |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0302-9743 |
ISBN |
978-3-319-11757-7 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
ICIAR |
|
| |
Notes |
IAM; DAG; 600.060; 600.061; 600.077; 600.075 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ BGB2014 |
Serial |
2559 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Hanne Kause; Aura Hernandez-Sabate; Patricia Marquez; Andrea Fuster; Luc Florack; Hans van Assen; Debora Gil |
|
| |
Title |
Confidence Measures for Assessing the HARP Algorithm in Tagged Magnetic Resonance Imaging |
Type |
Book Chapter |
| |
Year |
2015 |
Publication |
Statistical Atlases and Computational Models of the Heart. Revised selected papers of Imaging and Modelling Challenges 6th International Workshop, STACOM 2015, Held in Conjunction with MICCAI 2015 |
Abbreviated Journal |
|
|
| |
Volume |
9534 |
Issue |
|
Pages |
69-79 |
|
| |
Keywords |
|
|
| |
Abstract |
Cardiac deformation and changes therein have been linked to pathologies. Both can be extracted in detail from tagged Magnetic Resonance Imaging (tMRI) using harmonic phase (HARP) images. Although point tracking algorithms have shown to have high accuracies on HARP images, these vary with position. Detecting and discarding areas with unreliable results is crucial for use in clinical support systems. This paper assesses the capability of two confidence measures (CMs), based on energy and image structure, for detecting locations with reduced accuracy in motion tracking results. These CMs were tested on a database of simulated tMRI images containing the most common artifacts that may affect tracking accuracy. CM performance is assessed based on its capability for HARP tracking error bounding and compared in terms of significant differences detected using a multi comparison analysis of variance that takes into account the most influential factors on HARP tracking performance. Results showed that the CM based on image structure was better suited to detect unreliable optical flow vectors. In addition, it was shown that CMs can be used to detect optical flow vectors with large errors in order to improve the optical flow obtained with the HARP tracking algorithm. |
|
| |
Address |
Munich; Germany; January 2015 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer International Publishing |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0302-9743 |
ISBN |
978-3-319-28711-9 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
STACOM |
|
| |
Notes |
ADAS; IAM; 600.075; 600.076; 600.060; 601.145 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ KHM2015 |
Serial |
2734 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Josep Llados; Gemma Sanchez; Enric Marti |
|
| |
Title |
A string based method to recognize symbols and structural textures in architectural plans |
Type |
Book Chapter |
| |
Year |
1998 |
Publication |
Graphics Recognition Algorithms and Systems Second International Workshop, GREC' 97 Nancy, France, August 22–23, 1997 Selected Papers |
Abbreviated Journal |
LNCS |
|
| |
Volume |
1389 |
Issue |
1998 |
Pages |
91-103 |
|
| |
Keywords |
|
|
| |
Abstract |
This paper deals with the recognition of symbols and structural textures in architectural plans using string matching techniques. A plan is represented by an attributed graph whose nodes represent characteristic points and whose edges represent segments. Symbols and textures can be seen as a set of regions, i.e. closed loops in the graph, with a particular arrangement. The search for a symbol involves a graph matching between the regions of a model graph and the regions of the graph representing the document. Discriminating a texture means a clustering of neighbouring regions of this graph. Both procedures involve a similarity measure between graph regions. A string codification is used to represent the sequence of outlining edges of a region. Thus, the similarity between two regions is defined in terms of the string edit distance between their boundary strings. The use of string matching allows the recognition method to work also under presence of distortion. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer Link |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
LNCS |
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
DAG; IAM |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ SLE1998 |
Serial |
1573 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Sergio Vera; Debora Gil; Agnes Borras; F. Javier Sanchez; Frederic Perez; Marius G. Linguraru; Miguel Angel Gonzalez Ballester |
|
| |
Title |
Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs |
Type |
Book Chapter |
| |
Year |
2012 |
Publication |
Workshop on Computational and Clinical Applications in Abdominal Imaging |
Abbreviated Journal |
|
|
| |
Volume |
7029 |
Issue |
|
Pages |
223–230 |
|
| |
Keywords |
medial manifolds, abdomen. |
|
| |
Abstract |
Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D
objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial
manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our
method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs,
exploring the use of medial manifolds for the representation of multi-organ relations. |
|
| |
Address |
Toronto; Canada; |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer Link |
Place of Publication |
Berlin |
Editor |
H. Yoshida et al |
|
| |
Language |
English |
Summary Language |
English |
Original Title |
|
|
| |
Series Editor |
|
Series Title |
Lecture Notes in Computer Science |
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0302-9743 |
ISBN |
978-3-642-28556-1 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
ABDI |
|
| |
Notes |
IAM;MV |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ VGB2012 |
Serial |
1834 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Alberto Hidalgo; Ferran Poveda; Enric Marti;Debora Gil;Albert Andaluz; Francesc Carreras; Manuel Ballester |
|
| |
Title |
Evidence of continuous helical structure of the cardiac ventricular anatomy assessed by diffusion tensor imaging magnetic resonance multiresolution tractography |
Type |
Journal Article |
| |
Year |
2012 |
Publication |
European Radiology |
Abbreviated Journal |
ECR |
|
| |
Volume |
3 |
Issue |
1 |
Pages |
361-362 |
|
| |
Keywords |
|
|
| |
Abstract |
Deep understanding of myocardial structure linking morphology and func- tion of the heart would unravel crucial knowledge for medical and surgical clinical procedures and studies. Diffusion tensor MRI provides a discrete measurement of the 3D arrangement of myocardial fibres by the observation of local anisotropic
diffusion of water molecules in biological tissues. In this work, we present a multi- scale visualisation technique based on DT-MRI streamlining capable of uncovering additional properties of the architectural organisation of the heart. Methods and Materials: We selected the John Hopkins University (JHU) Canine Heart Dataset, where the long axis cardiac plane is aligned with the scanner’s Z- axis. Their equipment included a 4-element passed array coil emitting a 1.5 T. For DTI acquisition, a 3D-FSE sequence is apply. We used 200 seeds for full-scale tractography, while we applied a MIP mapping technique for simplified tractographic reconstruction. In this case, we reduced each DTI 3D volume dimensions by order- two magnitude before streamlining.
Our simplified tractographic reconstruction method keeps the main geometric features of fibres, allowing for an easier identification of their global morphological disposition, including the ventricular basal ring. Moreover, we noticed a clearly visible helical disposition of the myocardial fibres, in line with the helical myocardial band ventricular structure described by Torrent-Guasp. Finally, our simplified visualisation with single tracts identifies the main segments of the helical ventricular architecture.
DT-MRI makes possible the identification of a continuous helical architecture of the myocardial fibres, which validates Torrent-Guasp’s helical myocardial band ventricular anatomical model. |
|
| |
Address |
Viena, Austria |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer Link |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
1869-4101 |
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ HPM2012 |
Serial |
1858 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Patricia Marquez; Debora Gil; Aura Hernandez-Sabate; Daniel Kondermann |
|
| |
Title |
When Is A Confidence Measure Good Enough? |
Type |
Conference Article |
| |
Year |
2013 |
Publication |
9th International Conference on Computer Vision Systems |
Abbreviated Journal |
|
|
| |
Volume |
7963 |
Issue |
|
Pages |
344-353 |
|
| |
Keywords |
Optical flow, confidence measure, performance evaluation |
|
| |
Abstract |
Confidence estimation has recently become a hot topic in image processing and computer vision.Yet, several definitions exist of the term “confidence” which are sometimes used interchangeably. This is a position paper, in which we aim to give an overview on existing definitions,
thereby clarifying the meaning of the used terms to facilitate further research in this field. Based on these clarifications, we develop a theory to compare confidence measures with respect to their quality. |
|
| |
Address |
St Petersburg; Russia; July 2013 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer Link |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
LNCS |
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
0302-9743 |
ISBN |
978-3-642-39401-0 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
ICVS |
|
| |
Notes |
IAM;ADAS; 600.044; 600.057; 600.060; 601.145 |
Approved |
no |
|
| |
Call Number |
IAM @ iam @ MGH2013a |
Serial |
2218 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Debora Gil; Oriol Ramos Terrades; Raquel Perez |
|
| |
Title |
Topological Radiomics (TOPiomics): Early Detection of Genetic Abnormalities in Cancer Treatment Evolution |
Type |
Book Chapter |
| |
Year |
2021 |
Publication |
Extended Abstracts GEOMVAP 2019, Trends in Mathematics 15 |
Abbreviated Journal |
|
|
| |
Volume |
15 |
Issue |
|
Pages |
89–93 |
|
| |
Keywords |
|
|
| |
Abstract |
Abnormalities in radiomic measures correlate to genomic alterations prone to alter the outcome of personalized anti-cancer treatments. TOPiomics is a new method for the early detection of variations in tumor imaging phenotype from a topological structure in multi-view radiomic spaces. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
Springer Nature |
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM; DAG; 600.120; 600.145; 600.139 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ GRP2021 |
Serial |
3594 |
|
| Permanent link to this record |
