| |
Records |
Links |
|
Author |
Sergio Vera |
|
| |
Title |
Anatomic Registration based on Medial Axis Parametrizations |
Type |
Book Whole |
| |
Year |
2015 |
Publication |
PhD Thesis, Universitat Autonoma de Barcelona-CVC |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
|
|
| |
Abstract |
Image registration has been for many years the gold standard method to bring two images into correspondence. It has been used extensively in the eld of medical imaging in order to put images of di erent patients into a common overlapping spatial position. However, medical image registration is a slow, iterative optimization process, where many variables and prone to fall into the pit traps local minima.
A coordinate system parameterizing the interior of organs is a powerful tool for a systematic localization of injured tissue. If the same coordinate values are assigned to speci c anatomical sites, parameterizations ensure integration of data across different medical image modalities. Harmonic mappings have been used to produce parametric meshes over the surface of anatomical shapes, given their ability to set values at speci c locations through boundary conditions. However, most of the existing implementations in medical imaging restrict to either anatomical surfaces, or the depth coordinate with boundary conditions is given at discrete sites of limited geometric diversity.
The medial surface of the shape can be used to provide a continuous basis for the de nition of a depth coordinate. However, given that di erent methods for generation of medial surfaces generate di erent manifolds, not all of them are equally suited to be the basis of radial coordinate for a parameterization. It would be desirable that the medial surface will be smooth, and robust to surface shape noise, with low number of spurious branches or surfaces.
In this thesis we present methods for computation of smooth medial manifolds and apply them to the generation of for anatomical volumetric parameterization that extends current harmonic parameterizations to the interior anatomy using information provided by the volume medial surface. This reference system sets a solid base for creating anatomical models of the anatomical shapes, and allows comparing several patients in a common framework of reference. |
|
| |
Address |
November 2015 |
|
| |
Corporate Author |
|
Thesis |
Ph.D. thesis |
|
| |
Publisher |
Ediciones Graficas Rey |
Place of Publication |
|
Editor |
Debora Gil;Miguel Angel Gonzalez Ballester |
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
978-84-943427-8-3 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM; 600.075 |
Approved |
no |
|
| |
Call Number  |
Admin @ si @ Ver2015 |
Serial |
2708 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Sergio Vera; Miguel Angel Gonzalez Ballester; Debora Gil |
|
| |
Title |
Volumetric Anatomical Parameterization and Meshing for Inter-patient Liver Coordinate System Deffinition |
Type |
Conference Article |
| |
Year |
2013 |
Publication |
16th International Conference on Medical Image Computing and Computer Assisted Intervention |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
|
|
| |
Abstract |
|
|
| |
Address |
Nagoya; Japan; September 2013 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
MICCAI |
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
Admin @ si @ VGG2013 |
Serial |
2301 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Sergio Vera; Debora Gil; Miguel Angel Gonzalez Ballester |
|
| |
Title |
Anatomical parameterization for volumetric meshing of the liver |
Type |
Conference Article |
| |
Year |
2014 |
Publication |
SPIE – Medical Imaging |
Abbreviated Journal |
|
|
| |
Volume |
9036 |
Issue |
|
Pages |
|
|
| |
Keywords |
Coordinate System; Anatomy Modeling; Parameterization |
|
| |
Abstract |
A coordinate system describing the interior of organs is a powerful tool for a systematic localization of injured tissue. If the same coordinate values are assigned to specific anatomical landmarks, the coordinate system allows integration of data across different medical image modalities. Harmonic mappings have been used to produce parametric coordinate systems over the surface of anatomical shapes, given their flexibility to set values
at specific locations through boundary conditions. However, most of the existing implementations in medical imaging restrict to either anatomical surfaces, or the depth coordinate with boundary conditions is given at sites
of limited geometric diversity. In this paper we present a method for anatomical volumetric parameterization that extends current harmonic parameterizations to the interior anatomy using information provided by the
volume medial surface. We have applied the methodology to define a common reference system for the liver shape and functional anatomy. This reference system sets a solid base for creating anatomical models of the patient’s liver, and allows comparing livers from several patients in a common framework of reference. |
|
| |
Address |
Amsterdam; September 2014 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
SPIE-MI |
|
| |
Notes |
IAM; 600.075 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ VGG2014 |
Serial |
2456 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Sergio Vera; Miguel Angel Gonzalez Ballester; Debora Gil |
|
| |
Title |
A Novel Cochlear Reference Frame Based On The Laplace Equation |
Type |
Conference Article |
| |
Year |
2015 |
Publication |
29th international Congress and Exhibition on Computer Assisted Radiology and Surgery |
Abbreviated Journal |
|
|
| |
Volume |
10 |
Issue |
1 |
Pages |
1-312 |
|
| |
Keywords |
|
|
| |
Abstract |
Poster |
|
| |
Address |
Barcelona; Spain; June 2015 |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
CARS |
|
| |
Notes |
IAM; 600.075 |
Approved |
no |
|
| |
Call Number |
Admin @ si @ VGG2015 |
Serial |
2615 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Jose Elias Yauri |
|
| |
Title |
Deep Learning Based Data Fusion Approaches for the Assessment of Cognitive States on EEG Signals |
Type |
Book Whole |
| |
Year |
2023 |
Publication |
PhD Thesis, Universitat Autonoma de Barcelona-CVC |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
|
|
| |
Abstract |
For millennia, the study of the couple brain-mind has fascinated the humanity in order to understand the complex nature of cognitive states. A cognitive state is the state of the mind at a specific time and involves cognition activities to acquire and process information for making a decision, solving a problem, or achieving a goal.
While normal cognitive states assist in the successful accomplishment of tasks; on the contrary, abnormal states of the mind can lead to task failures due to a reduced cognition capability. In this thesis, we focus on the assessment of cognitive states by means of the analysis of ElectroEncephaloGrams (EEG) signals using deep learning methods. EEG records the electrical activity of the brain using a set of electrodes placed on the scalp that output a set of spatiotemporal signals that are expected to be correlated to a specific mental process.
From the point of view of artificial intelligence, any method for the assessment of cognitive states using EEG signals as input should face several challenges. On the one hand, one should determine which is the most suitable approach for the optimal combination of the multiple signals recorded by EEG electrodes. On the other hand, one should have a protocol for the collection of good quality unambiguous annotated data, and an experimental design for the assessment of the generalization and transfer of models. In order to tackle them, first, we propose several convolutional neural architectures to perform data fusion of the signals recorded by EEG electrodes, at raw signal and feature levels. Four channel fusion methods, easy to incorporate into any neural network architecture, are proposed and assessed. Second, we present a method to create an unambiguous dataset for the prediction of cognitive mental workload using serious games and an Airbus-320 flight simulator. Third, we present a validation protocol that takes into account the levels of generalization of models based on the source and amount of test data.
Finally, the approaches for the assessment of cognitive states are applied to two use cases of high social impact: the assessment of mental workload for personalized support systems in the cockpit and the detection of epileptic seizures. The results obtained from the first use case show the feasibility of task transfer of models trained to detect workload in serious games to real flight scenarios. The results from the second use case show the generalization capability of our EEG channel fusion methods at k-fold cross-validation, patient-specific, and population levels. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
Ph.D. thesis |
|
| |
Publisher |
IMPRIMA |
Place of Publication |
|
Editor |
Aura Hernandez;Debora Gil |
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM |
Approved |
no |
|
| |
Call Number |
Admin @ si @ Yau2023 |
Serial |
3962 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Gloria Fernandez Esparrach; Jorge Bernal; Cristina Rodriguez de Miguel; Debora Gil; Fernando Vilariño; Henry Cordova; Cristina Sanchez Montes; Isis Ara |
|
| |
Title |
Utilidad de la visión por computador para la localización de pólipos pequeños y planos |
Type |
Conference Article |
| |
Year |
2016 |
Publication |
XIX Reunión Nacional de la Asociación Española de Gastroenterología, Gastroenterology Hepatology |
Abbreviated Journal |
|
|
| |
Volume |
39 |
Issue |
2 |
Pages |
94 |
|
| |
Keywords |
|
|
| |
Abstract |
|
|
| |
Address |
Madrid (Spain) |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
AEGASTRO |
|
| |
Notes |
MV; IAM; 600.097;SIAI |
Approved |
no |
|
| |
Call Number |
Admin @ si @FBR2016 |
Serial |
2779 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Joel Barajas; Jaume Garcia; Francesc Carreras; Sandra Pujades; Petia Radeva |
|
| |
Title |
Angle Images Using Gabor Filters in Cardiac Tagged MRI |
Type |
Conference Article |
| |
Year |
2005 |
Publication |
Proceeding of the 2005 conference on Artificial Intelligence Research and Development |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
107-114 |
|
| |
Keywords |
Angle Images, Gabor Filters, Harp, Tagged Mri |
|
| |
Abstract |
Tagged Magnetic Resonance Imaging (MRI) is a non-invasive technique used to examine cardiac deformation in vivo. An Angle Image is a representation of a Tagged MRI which recovers the relative position of the tissue respect to the distorted tags. Thus cardiac deformation can be estimated. This paper describes a new approach to generate Angle Images using a bank of Gabor filters in short axis cardiac Tagged MRI. Our method improves the Angle Images obtained by global techniques, like HARP, with a local frequency analysis. We propose to use the phase response of a combination of a Gabor filters bank, and use it to find a more precise deformation of the left ventricle. We demonstrate the accuracy of our method over HARP by several experimental results. |
|
| |
Address |
Amsterdam; The Netherlands |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
IOS Press |
Place of Publication |
Amsterdam, The Netherlands |
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
1-58603-560-6 |
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
CAIRD |
|
| |
Notes |
IAM;MILAB |
Approved |
no |
|
| |
Call Number |
BCNPCL @ bcnpcl @ BGC2005; IAM @ iam |
Serial |
595 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Debora Gil; Petia Radeva |
|
| |
Title |
A Regularized Curvature Flow Designed for a Selective Shape Restoration |
Type |
Journal Article |
| |
Year |
2004 |
Publication |
IEEE Transactions on Image Processing |
Abbreviated Journal |
|
|
| |
Volume |
13 |
Issue |
|
Pages |
1444–1458 |
|
| |
Keywords |
Geometric flows, nonlinear filtering, shape recovery. |
|
| |
Abstract |
Among all filtering techniques, those based exclu- sively on image level sets (geometric flows) have proven to be the less sensitive to the nature of noise and the most contrast preserving. A common feature to existent curvature flows is that they penalize high curvature, regardless of the curve regularity. This constitutes a major drawback since curvature extreme values are standard descriptors of the contour geometry. We argue that an operator designed with shape recovery purposes should include a term penalizing irregularity in the curvature rather than its magnitude. To this purpose, we present a novel geometric flow that includes a function that measures the degree of local irregularity present in the curve. A main advantage is that it achieves non-trivial steady states representing a smooth model of level curves in a noisy image. Performance of our approach is compared to classical filtering techniques in terms of quality in the restored image/shape and asymptotic behavior. We empirically prove that our approach is the technique that achieves the best compromise between image quality and evolution stabilization. |
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM;MILAB |
Approved |
no |
|
| |
Call Number |
BCNPCL @ bcnpcl @ GiR2004b |
Serial |
491 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Agata Lapedriza; Jaume Garcia; Ernest Valveny; Robert Benavente; Miquel Ferrer; Gemma Sanchez |
|
| |
Title |
Una experiencia de aprenentatge basada en projectes en el ambit de la informatica |
Type |
Miscellaneous |
| |
Year |
2008 |
Publication |
V Jornades d’Innovacio Docent (UAB) |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
63 |
|
| |
Keywords |
|
|
| |
Abstract |
|
|
| |
Address |
Bellaterra (Spain) |
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
OR; IAM; DAG; CIC; MV |
Approved |
no |
|
| |
Call Number |
BCNPCL @ bcnpcl @ LGV2008 |
Serial |
1030 |
|
| Permanent link to this record |
| |
|
| |
|
Author |
Enric Marti; J. Rocarias; Petia Radeva; H. Tizon; Jordi Vitria |
|
| |
Title |
Caronte. Un gestor documental para asignaturas de universidad en el EEES |
Type |
Miscellaneous |
| |
Year |
2007 |
Publication |
Desarrollo de gestion de grupos, encuestas y autoevaluacion, MoodleMoot 2007 |
Abbreviated Journal |
|
|
| |
Volume |
|
Issue |
|
Pages |
|
|
| |
Keywords |
|
|
| |
Abstract |
|
|
| |
Address |
|
|
| |
Corporate Author |
|
Thesis |
|
|
| |
Publisher |
|
Place of Publication |
|
Editor |
|
|
| |
Language |
|
Summary Language |
|
Original Title |
|
|
| |
Series Editor |
|
Series Title |
|
Abbreviated Series Title |
|
|
| |
Series Volume |
|
Series Issue |
|
Edition |
|
|
| |
ISSN |
|
ISBN |
|
Medium |
|
|
| |
Area |
|
Expedition |
|
Conference |
|
|
| |
Notes |
IAM;OR;MILAB;MV |
Approved |
no |
|
| |
Call Number |
BCNPCL @ bcnpcl @ MRR2007b |
Serial |
1128 |
|
| Permanent link to this record |
