Debora Gil, Jaume Garcia, Aura Hernandez-Sabate, & Enric Marti. (2010). Manifold parametrization of the left ventricle for a statistical modelling of its complete anatomy. In 8th Medical Imaging (Vol. 7623, 304). SPIE.
Abstract: Distortion of Left Ventricle (LV) external anatomy is related to some dysfunctions, such as hypertrophy. The architecture of myocardial fibers determines LV electromechanical activation patterns as well as mechanics. Thus, their joined modelling would allow the design of specific interventions (such as peacemaker implantation and LV remodelling) and therapies (such as resynchronization). On one hand, accurate modelling of external anatomy requires either a dense sampling or a continuous infinite dimensional approach, which requires non-Euclidean statistics. On the other hand, computation of fiber models requires statistics on Riemannian spaces. Most approaches compute separate statistical models for external anatomy and fibers architecture. In this work we propose a general mathematical framework based on differential geometry concepts for computing a statistical model including, both, external and fiber anatomy. Our framework provides a continuous approach to external anatomy supporting standard statistics. We also provide a straightforward formula for the computation of the Riemannian fiber statistics. We have applied our methodology to the computation of complete anatomical atlas of canine hearts from diffusion tensor studies. The orientation of fibers over the average external geometry agrees with the segmental description of orientations reported in the literature.
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Fernando Vilariño, Panagiota Spyridonos, Petia Radeva, Jordi Vitria, Fernando Azpiroz, & Juan Malagelada. (2010). Method for automatic classification of in vivo images.
Abstract: A method for automatically detecting a post-duodenal boundary in an image stream of the gastrointestinal (GI) tract. The image stream is sampled to obtain a reduced set of images for processing. The reduced set of images is filtered to remove non-valid frames or non-valid portions of frames, thereby generating a filtered set of valid images. A polar representation of the valid images is generated. Textural features of the polar representation are processed to detect the post-duodenal boundary of the GI tract.
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Aura Hernandez-Sabate, Monica Mitiko, Sergio Shiguemi, & Debora Gil. (2010). A validation protocol for assessing cardiac phase retrieval in IntraVascular UltraSound. In Computing in Cardiology (Vol. 37, pp. 899–902). IEEE.
Abstract: A good reliable approach to cardiac triggering is of utmost importance in obtaining accurate quantitative results of atherosclerotic plaque burden from the analysis of IntraVascular UltraSound. Although, in the last years, there has been an increase in research of methods for retrospective gating, there is no general consensus in a validation protocol. Many methods are based on quality assessment of longitudinal cuts appearance and those reporting quantitative numbers do not follow a standard protocol. Such heterogeneity in validation protocols makes faithful comparison across methods a difficult task. We propose a validation protocol based on the variability of the retrieved cardiac phase and explore the capability of several quality measures for quantifying such variability. An ideal detector, suitable for its application in clinical practice, should produce stable phases. That is, it should always sample the same cardiac cycle fraction. In this context, one should measure the variability (variance) of a candidate sampling with respect a ground truth (reference) sampling, since the variance would indicate how spread we are aiming a target. In order to quantify the deviation between the sampling and the ground truth, we have considered two quality scores reported in the literature: signed distance to the closest reference sample and distance to the right of each reference sample. We have also considered the residuals of the regression line of reference against candidate sampling. The performance of the measures has been explored on a set of synthetic samplings covering different cardiac cycle fractions and variabilities. From our simulations, we conclude that the metrics related to distances are sensitive to the shift considered while the residuals are robust against fraction and variabilities as far as one can establish a pair-wise correspondence between candidate and reference. We will further investigate the impact of false positive and negative detections in experimental data.
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Jaume Garcia, Albert Andaluz, Debora Gil, & Francesc Carreras. (2010). Decoupled External Forces in a Predictor-Corrector Segmentation Scheme for LV Contours in Tagged MR Images. In 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (pp. 4805–4808).
Abstract: Computation of functional regional scores requires proper identification of LV contours. On one hand, manual segmentation is robust, but it is time consuming and requires high expertise. On the other hand, the tag pattern in TMR sequences is a problem for automatic segmentation of LV boundaries. We propose a segmentation method based on a predictorcorrector (Active Contours – Shape Models) scheme. Special stress is put in the definition of the AC external forces. First, we introduce a semantic description of the LV that discriminates myocardial tissue by using texture and motion descriptors. Second, in order to ensure convergence regardless of the initial contour, the external energy is decoupled according to the orientation of the edges in the image potential. We have validated the model in terms of error in segmented contours and accuracy of regional clinical scores.
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David Aldavert, Arnau Ramisa, Ramon Lopez de Mantaras, & Ricardo Toledo. (2010). Real-time Object Segmentation using a Bag of Features Approach. In J.Aguilar. A. M. In R.Alquezar (Ed.), 13th International Conference of the Catalan Association for Artificial Intelligence (Vol. 220, 321–329). IOS Press Amsterdam,.
Abstract: In this paper, we propose an object segmentation framework, based on the popular bag of features (BoF), which can process several images per second while achieving a good segmentation accuracy assigning an object category to every pixel of the image. We propose an efficient color descriptor to complement the information obtained by a typical gradient-based local descriptor. Results show that color proves to be a useful cue to increase the segmentation accuracy, specially in large homogeneous regions. Then, we extend the Hierarchical K-Means codebook using the recently proposed Vector of Locally Aggregated Descriptors method. Finally, we show that the BoF method can be easily parallelized since it is applied locally, thus the time necessary to process an image is further reduced. The performance of the proposed method is evaluated in the standard PASCAL 2007 Segmentation Challenge object segmentation dataset.
Keywords: Object Segmentation; Bag Of Features; Feature Quantization; Densely sampled descriptors
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Robert Benavente, C. Alejandro Parraga, & Maria Vanrell. (2010). La influencia del contexto en la definicion de las fronteras entre las categorias cromaticas. In 9th Congreso Nacional del Color (92–95).
Abstract: En este artículo presentamos los resultados de un experimento de categorización de color en el que las muestras se presentaron sobre un fondo multicolor (Mondrian) para simular los efectos del contexto. Los resultados se comparan con los de un experimento previo que, utilizando un paradigma diferente, determinó las fronteras sin tener en cuenta el contexto. El análisis de los resultados muestra que las fronteras obtenidas con el experimento en contexto presentan menos confusión que las obtenidas en el experimento sin contexto.
Keywords: Categorización del color; Apariencia del color; Influencia del contexto; Patrones de Mondrian; Modelos paramétricos
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Albert Andaluz, Francesc Carreras, Debora Gil, & Jaume Garcia. (2010). Una aplicació amigable pel càlcul de indicadors clínics del ventricle esquerre. Barcelona: Biocat.
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Jose Antonio Rodriguez, Florent Perronnin, Gemma Sanchez, & Josep Llados. (2010). Unsupervised writer adaptation of whole-word HMMs with application to word-spotting. PRL - Pattern Recognition Letters, 31(8), 742–749.
Abstract: In this paper we propose a novel approach for writer adaptation in a handwritten word-spotting task. The method exploits the fact that the semi-continuous hidden Markov model separates the word model parameters into (i) a codebook of shapes and (ii) a set of word-specific parameters.
Our main contribution is to employ this property to derive writer-specific word models by statistically adapting an initial universal codebook to each document. This process is unsupervised and does not even require the appearance of the keyword(s) in the searched document. Experimental results show an increase in performance when this adaptation technique is applied. To the best of our knowledge, this is the first work dealing with adaptation for word-spotting. The preliminary version of this paper obtained an IBM Best Student Paper Award at the 19th International Conference on Pattern Recognition.
Keywords: Word-spotting; Handwriting recognition; Writer adaptation; Hidden Markov model; Document analysis
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Sergio Escalera, Oriol Pujol, & Petia Radeva. (2010). Re-coding ECOCs without retraining. PRL - Pattern Recognition Letters, 31(7), 555–562.
Abstract: A standard way to deal with multi-class categorization problems is by the combination of binary classifiers in a pairwise voting procedure. Recently, this classical approach has been formalized in the Error-Correcting Output Codes (ECOC) framework. In the ECOC framework, the one-versus-one coding demonstrates to achieve higher performance than the rest of coding designs. The binary problems that we train in the one-versus-one strategy are significantly smaller than in the rest of designs, and usually easier to be learnt, taking into account the smaller overlapping between classes. However, a high percentage of the positions coded by zero of the coding matrix, which implies a high sparseness degree, does not codify meta-class membership information. In this paper, we show that using the training data we can redefine without re-training, in a problem-dependent way, the one-versus-one coding matrix so that the new coded information helps the system to increase its generalization capability. Moreover, the new re-coding strategy is generalized to be applied over any binary code. The results over several UCI Machine Learning repository data sets and two real multi-class problems show that performance improvements can be obtained re-coding the classical one-versus-one and Sparse random designs compared to different state-of-the-art ECOC configurations.
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Joan Mas, Josep Llados, Gemma Sanchez, & J.A. Jorge. (2010). A syntactic approach based on distortion-tolerant Adjacency Grammars and a spatial-directed parser to interpret sketched diagrams. PR - Pattern Recognition, 43(12), 4148–4164.
Abstract: This paper presents a syntactic approach based on Adjacency Grammars (AG) for sketch diagram modeling and understanding. Diagrams are a combination of graphical symbols arranged according to a set of spatial rules defined by a visual language. AG describe visual shapes by productions defined in terms of terminal and non-terminal symbols (graphical primitives and subshapes), and a set functions describing the spatial arrangements between symbols. Our approach to sketch diagram understanding provides three main contributions. First, since AG are linear grammars, there is a need to define shapes and relations inherently bidimensional using a sequential formalism. Second, our parsing approach uses an indexing structure based on a spatial tessellation. This serves to reduce the search space when finding candidates to produce a valid reduction. This allows order-free parsing of 2D visual sentences while keeping combinatorial explosion in check. Third, working with sketches requires a distortion model to cope with the natural variations of hand drawn strokes. To this end we extended the basic grammar with a distortion measure modeled on the allowable variation on spatial constraints associated with grammar productions. Finally, the paper reports on an experimental framework an interactive system for sketch analysis. User tests performed on two real scenarios show that our approach is usable in interactive settings.
Keywords: Syntactic Pattern Recognition; Symbol recognition; Diagram understanding; Sketched diagrams; Adjacency Grammars; Incremental parsing; Spatial directed parsing
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Umapada Pal, Partha Pratim Roy, N. Tripathya, & Josep Llados. (2010). Multi-oriented Bangla and Devnagari text recognition. PR - Pattern Recognition, 43(12), 4124–4136.
Abstract: There are printed complex documents where text lines of a single page may have different orientations or the text lines may be curved in shape. As a result, it is difficult to detect the skew of such documents and hence character segmentation and recognition of such documents are a complex task. In this paper, using background and foreground information we propose a novel scheme towards the recognition of Indian complex documents of Bangla and Devnagari script. In Bangla and Devnagari documents usually characters in a word touch and they form cavity regions. To take care of these cavity regions, background information of such documents is used. Convex hull and water reservoir principle have been applied for this purpose. Here, at first, the characters are segmented from the documents using the background information of the text. Next, individual characters are recognized using rotation invariant features obtained from the foreground part of the characters.
For character segmentation, at first, writing mode of a touching component (word) is detected using water reservoir principle based features. Next, depending on writing mode and the reservoir base-region of the touching component, a set of candidate envelope points is then selected from the contour points of the component. Based on these candidate points, the touching component is finally segmented into individual characters. For recognition of multi-sized/multi-oriented characters the features are computed from different angular information obtained from the external and internal contour pixels of the characters. These angular information are computed in such a way that they do not depend on the size and rotation of the characters. Circular and convex hull rings have been used to divide a character into smaller zones to get zone-wise features for higher recognition results. We combine circular and convex hull features to improve the results and these features are fed to support vector machines (SVM) for recognition. From our experiment we obtained recognition results of 99.18% (98.86%) accuracy when tested on 7515 (7874) Devnagari (Bangla) characters.
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Miquel Ferrer, Ernest Valveny, F. Serratosa, K. Riesen, & Horst Bunke. (2010). Generalized Median Graph Computation by Means of Graph Embedding in Vector Spaces. PR - Pattern Recognition, 43(4), 1642–1655.
Abstract: The median graph has been presented as a useful tool to represent a set of graphs. Nevertheless its computation is very complex and the existing algorithms are restricted to use limited amount of data. In this paper we propose a new approach for the computation of the median graph based on graph embedding. Graphs are embedded into a vector space and the median is computed in the vector domain. We have designed a procedure based on the weighted mean of a pair of graphs to go from the vector domain back to the graph domain in order to obtain a final approximation of the median graph. Experiments on three different databases containing large graphs show that we succeed to compute good approximations of the median graph. We have also applied the median graph to perform some basic classification tasks achieving reasonable good results. These experiments on real data open the door to the application of the median graph to a number of more complex machine learning algorithms where a representative of a set of graphs is needed.
Keywords: Graph matching; Weighted mean of graphs; Median graph; Graph embedding; Vector spaces
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Bogdan Raducanu, Jordi Vitria, & Ales Leonardis. (2010). Online pattern recognition and machine learning techniques for computer-vision: Theory and applications. IMAVIS - Image and Vision Computing, 28(7), 1063–1064.
Abstract: (Editorial for the Special Issue on Online pattern recognition and machine learning techniques)
In real life, visual learning is supposed to be a continuous process. This paradigm has found its way also in artificial vision systems. There is an increasing trend in pattern recognition represented by online learning approaches, which aims at continuously updating the data representation when new information arrives. Starting with a minimal dataset, the initial knowledge is expanded by incorporating incoming instances, which may have not been previously available or foreseen at the system’s design stage. An interesting characteristic of this strategy is that the train and test phases take place simultaneously. Given the increasing interest in this subject, the aim of this special issue is to be a landmark event in the development of online learning techniques and their applications with the hope that it will capture the interest of a wider audience and will attract even more researchers. We received 19 contributions, of which 9 have been accepted for publication, after having been subjected to usual peer review process.
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Sergio Escalera, Oriol Pujol, & Petia Radeva. (2010). Error-Correcting Output Codes Library. JMLR - Journal of Machine Learning Research, 11, 661–664.
Abstract: (Feb):661−664
In this paper, we present an open source Error-Correcting Output Codes (ECOC) library. The ECOC framework is a powerful tool to deal with multi-class categorization problems. This library contains both state-of-the-art coding (one-versus-one, one-versus-all, dense random, sparse random, DECOC, forest-ECOC, and ECOC-ONE) and decoding designs (hamming, euclidean, inverse hamming, laplacian, β-density, attenuated, loss-based, probabilistic kernel-based, and loss-weighted) with the parameters defined by the authors, as well as the option to include your own coding, decoding, and base classifier.
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Partha Pratim Roy, Umapada Pal, & Josep Llados. (2010). Seal Object Detection in Document Images using GHT of Local Component Shapes. In 10th ACM Symposium On Applied Computing (23–27).
Abstract: Due to noise, overlapped text/signature and multi-oriented nature, seal (stamp) object detection involves a difficult challenge. This paper deals with automatic detection of seal from documents with cluttered background. Here, a seal object is characterized by scale and rotation invariant spatial feature descriptors (distance and angular position) computed from recognition result of individual connected components (characters). Recognition of multi-scale and multi-oriented component is done using Support Vector Machine classifier. Generalized Hough Transform (GHT) is used to detect the seal and a voting is casted for finding possible location of the seal object in a document based on these spatial feature descriptor of components pairs. The peak of votes in GHT accumulator validates the hypothesis to locate the seal object in a document. Experimental results show that, the method is efficient to locate seal instance of arbitrary shape and orientation in documents.
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