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| Author | Cristina Sanchez Montes; Jorge Bernal; Ana Garcia Rodriguez; Henry Cordova; Gloria Fernandez Esparrach | ||||
| Title | Revisión de métodos computacionales de detección y clasificación de pólipos en imagen de colonoscopia | Type | Journal Article | ||
| Year | 2020 | Publication | Gastroenterología y Hepatología | Abbreviated Journal | GH |
| Volume | 43 | Issue | 4 | Pages | 222-232 |
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| Abstract | Computer-aided diagnosis (CAD) is a tool with great potential to help endoscopists in the tasks of detecting and histologically classifying colorectal polyps. In recent years, different technologies have been described and their potential utility has been increasingly evidenced, which has generated great expectations among scientific societies. However, most of these works are retrospective and use images of different quality and characteristics which are analysed off line. This review aims to familiarise gastroenterologists with computational methods and the particularities of endoscopic imaging, which have an impact on image processing analysis. Finally, the publicly available image databases, needed to compare and confirm the results obtained with different methods, are presented. | ||||
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| Notes | MV; | Approved | no | ||
| Call Number | Admin @ si @ SBG2020 | Serial | 3404 | ||
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| Author | Tao Wu; Kai Wang; Chuanming Tang; Jianlin Zhang | ||||
| Title | Diffusion-based network for unsupervised landmark detection | Type | Journal Article | ||
| Year | 2024 | Publication | Knowledge-Based Systems | Abbreviated Journal | |
| Volume | 292 | Issue | Pages | 111627 | |
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| Abstract | Landmark detection is a fundamental task aiming at identifying specific landmarks that serve as representations of distinct object features within an image. However, the present landmark detection algorithms often adopt complex architectures and are trained in a supervised manner using large datasets to achieve satisfactory performance. When faced with limited data, these algorithms tend to experience a notable decline in accuracy. To address these drawbacks, we propose a novel diffusion-based network (DBN) for unsupervised landmark detection, which leverages the generation ability of the diffusion models to detect the landmark locations. In particular, we introduce a dual-branch encoder (DualE) for extracting visual features and predicting landmarks. Additionally, we lighten the decoder structure for faster inference, referred to as LightD. By this means, we avoid relying on extensive data comparison and the necessity of designing complex architectures as in previous methods. Experiments on CelebA, AFLW, 300W and Deepfashion benchmarks have shown that DBN performs state-of-the-art compared to the existing methods. Furthermore, DBN shows robustness even when faced with limited data cases. | ||||
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| Notes | LAMP | Approved | no | ||
| Call Number | Admin @ si @ WWT2024 | Serial | 4024 | ||
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| Author | Mohammad Momeny; Ali Asghar Neshat; Ahmad Jahanbakhshi; Majid Mahmoudi; Yiannis Ampatzidis; Petia Radeva | ||||
| Title | Grading and fraud detection of saffron via learning-to-augment incorporated Inception-v4 CNN | Type | Journal Article | ||
| Year | 2023 | Publication | Food Control | Abbreviated Journal | FC |
| Volume | 147 | Issue | Pages | 109554 | |
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| Abstract | Saffron is a well-known product in the food industry. It is one of the spices that are sometimes adulterated with the sole motive of gaining more economic profit. Today, machine vision systems are widely used in controlling the quality of food and agricultural products as a new, non-destructive, and inexpensive approach. In this study, a machine vision system based on deep learning was used to detect fraud and saffron quality. A dataset of 1869 images was created and categorized in 6 classes including: dried saffron stigma using a dryer; dried saffron stigma using pressing method; pure stem of saffron; sunflower; saffron stem mixed with food coloring; and corn silk mixed with food coloring. A Learning-to-Augment incorporated Inception-v4 Convolutional Neural Network (LAII-v4 CNN) was developed for grading and fraud detection of saffron in images captured by smartphones. The best policies of data augmentation were selected with the proposed LAII-v4 CNN using images corrupted by Gaussian, speckle, and impulse noise to address overfitting the model. The proposed LAII-v4 CNN compared with regular CNN-based methods and traditional classifiers. Ensemble of Bagged Decision Trees, Ensemble of Boosted Decision Trees, k-Nearest Neighbor, Random Under-sampling Boosted Trees, and Support Vector Machine were used for classification of the features extracted by Histograms of Oriented Gradients and Local Binary Patterns, and selected by the Principal Component Analysis. The results showed that the proposed LAII-v4 CNN with an accuracy of 99.5% has achieved the best performance by employing batch normalization, Dropout, and leaky ReLU. | ||||
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| Notes | MILAB | Approved | no | ||
| Call Number | Admin @ si @ MNJ2023 | Serial | 3882 | ||
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| Author | Shiqi Yang; Yaxing Wang; Luis Herranz; Shangling Jui; Joost Van de Weijer | ||||
| Title | Casting a BAIT for offline and online source-free domain adaptation | Type | Journal Article | ||
| Year | 2023 | Publication | Computer Vision and Image Understanding | Abbreviated Journal | CVIU |
| Volume | 234 | Issue | Pages | 103747 | |
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| Abstract | We address the source-free domain adaptation (SFDA) problem, where only the source model is available during adaptation to the target domain. We consider two settings: the offline setting where all target data can be visited multiple times (epochs) to arrive at a prediction for each target sample, and the online setting where the target data needs to be directly classified upon arrival. Inspired by diverse classifier based domain adaptation methods, in this paper we introduce a second classifier, but with another classifier head fixed. When adapting to the target domain, the additional classifier initialized from source classifier is expected to find misclassified features. Next, when updating the feature extractor, those features will be pushed towards the right side of the source decision boundary, thus achieving source-free domain adaptation. Experimental results show that the proposed method achieves competitive results for offline SFDA on several benchmark datasets compared with existing DA and SFDA methods, and our method surpasses by a large margin other SFDA methods under online source-free domain adaptation setting. | ||||
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| Notes | LAMP; MACO | Approved | no | ||
| Call Number | Admin @ si @ YWH2023 | Serial | 3874 | ||
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| Author | Lei Li; Fuping Wu; Sihan Wang; Xinzhe Luo; Carlos Martin-Isla; Shuwei Zhai; Jianpeng Zhang; Yanfei Liu; Zhen Zhang; Markus J. Ankenbrand; Haochuan Jiang; Xiaoran Zhang; Linhong Wang; Tewodros Weldebirhan Arega; Elif Altunok; Zhou Zhao; Feiyan Li; Jun Ma; Xiaoping Yang; Elodie Puybareau; Ilkay Oksuz; Stephanie Bricq; Weisheng Li;Kumaradevan Punithakumar; Sotirios A. Tsaftaris; Laura M. Schreiber; Mingjing Yang; Guocai Liu; Yong Xia; Guotai Wang; Sergio Escalera; Xiahai Zhuag | ||||
| Title | MyoPS: A benchmark of myocardial pathology segmentation combining three-sequence cardiac magnetic resonance images | Type | Journal Article | ||
| Year | 2023 | Publication | Medical Image Analysis | Abbreviated Journal | MIA |
| Volume | 87 | Issue | Pages | 102808 | |
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| Abstract | Assessment of myocardial viability is essential in diagnosis and treatment management of patients suffering from myocardial infarction, and classification of pathology on the myocardium is the key to this assessment. This work defines a new task of medical image analysis, i.e., to perform myocardial pathology segmentation (MyoPS) combining three-sequence cardiac magnetic resonance (CMR) images, which was first proposed in the MyoPS challenge, in conjunction with MICCAI 2020. Note that MyoPS refers to both myocardial pathology segmentation and the challenge in this paper. The challenge provided 45 paired and pre-aligned CMR images, allowing algorithms to combine the complementary information from the three CMR sequences for pathology segmentation. In this article, we provide details of the challenge, survey the works from fifteen participants and interpret their methods according to five aspects, i.e., preprocessing, data augmentation, learning strategy, model architecture and post-processing. In addition, we analyze the results with respect to different factors, in order to examine the key obstacles and explore the potential of solutions, as well as to provide a benchmark for future research. The average Dice scores of submitted algorithms were and for myocardial scars and edema, respectively. We conclude that while promising results have been reported, the research is still in the early stage, and more in-depth exploration is needed before a successful application to the clinics. MyoPS data and evaluation tool continue to be publicly available upon registration via its homepage (www.sdspeople.fudan.edu.cn/zhuangxiahai/0/myops20/). | ||||
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| Notes | HUPBA | Approved | no | ||
| Call Number | Admin @ si @ LWW2023a | Serial | 3878 | ||
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| Author | Antoni Rosell; Sonia Baeza; S. Garcia-Reina; JL. Mate; Ignasi Guasch; I. Nogueira; I. Garcia-Olive; Guillermo Torres; Carles Sanchez; Debora Gil | ||||
| Title | EP01.05-001 Radiomics to Increase the Effectiveness of Lung Cancer Screening Programs. Radiolung Preliminary Results | Type | Journal Article | ||
| Year | 2022 | Publication | Journal of Thoracic Oncology | Abbreviated Journal | JTO |
| Volume | 17 | Issue | 9 | Pages | S182 |
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| Notes | IAM | Approved | no | ||
| Call Number | Admin @ si @ RBG2022b | Serial | 3834 | ||
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| Author | Raul Gomez; Lluis Gomez; Jaume Gibert; Dimosthenis Karatzas | ||||
| Title | Self-Supervised Learning from Web Data for Multimodal Retrieval | Type | Book Chapter | ||
| Year | 2019 | Publication | Multi-Modal Scene Understanding Book | Abbreviated Journal | |
| Volume | Issue | Pages | 279-306 | ||
| Keywords | self-supervised learning; webly supervised learning; text embeddings; multimodal retrieval; multimodal embedding | ||||
| Abstract | Self-Supervised learning from multimodal image and text data allows deep neural networks to learn powerful features with no need of human annotated data. Web and Social Media platforms provide a virtually unlimited amount of this multimodal data. In this work we propose to exploit this free available data to learn a multimodal image and text embedding, aiming to leverage the semantic knowledge learnt in the text domain and transfer it to a visual model for semantic image retrieval. We demonstrate that the proposed pipeline can learn from images with associated text without supervision and analyze the semantic structure of the learnt joint image and text embeddingspace. Weperformathoroughanalysisandperformancecomparisonoffivedifferentstateof the art text embeddings in three different benchmarks. We show that the embeddings learnt with Web and Social Media data have competitive performances over supervised methods in the text basedimageretrievaltask,andweclearlyoutperformstateoftheartintheMIRFlickrdatasetwhen training in the target data. Further, we demonstrate how semantic multimodal image retrieval can be performed using the learnt embeddings, going beyond classical instance-level retrieval problems. Finally, we present a new dataset, InstaCities1M, composed by Instagram images and their associated texts that can be used for fair comparison of image-text embeddings. | ||||
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| Notes | DAG; 600.129; 601.338; 601.310 | Approved | no | ||
| Call Number | Admin @ si @ GGG2019 | Serial | 3266 | ||
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| Author | Andres Mafla; Ruben Tito; Sounak Dey; Lluis Gomez; Marçal Rusiñol; Ernest Valveny; Dimosthenis Karatzas | ||||
| Title | Real-time Lexicon-free Scene Text Retrieval | Type | Journal Article | ||
| Year | 2021 | Publication | Pattern Recognition | Abbreviated Journal | PR |
| Volume | 110 | Issue | Pages | 107656 | |
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| Abstract | In this work, we address the task of scene text retrieval: given a text query, the system returns all images containing the queried text. The proposed model uses a single shot CNN architecture that predicts bounding boxes and builds a compact representation of spotted words. In this way, this problem can be modeled as a nearest neighbor search of the textual representation of a query over the outputs of the CNN collected from the totality of an image database. Our experiments demonstrate that the proposed model outperforms previous state-of-the-art, while offering a significant increase in processing speed and unmatched expressiveness with samples never seen at training time. Several experiments to assess the generalization capability of the model are conducted in a multilingual dataset, as well as an application of real-time text spotting in videos. | ||||
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| Notes | DAG; 600.121; 600.129; 601.338 | Approved | no | ||
| Call Number | Admin @ si @ MTD2021 | Serial | 3493 | ||
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| Author | Ivet Rafegas; Maria Vanrell | ||||
| Title | Color encoding in biologically-inspired convolutional neural networks | Type | Journal Article | ||
| Year | 2018 | Publication | Vision Research | Abbreviated Journal | VR |
| Volume | 151 | Issue | Pages | 7-17 | |
| Keywords | Color coding; Computer vision; Deep learning; Convolutional neural networks | ||||
| Abstract | Convolutional Neural Networks have been proposed as suitable frameworks to model biological vision. Some of these artificial networks showed representational properties that rival primate performances in object recognition. In this paper we explore how color is encoded in a trained artificial network. It is performed by estimating a color selectivity index for each neuron, which allows us to describe the neuron activity to a color input stimuli. The index allows us to classify whether they are color selective or not and if they are of a single or double color. We have determined that all five convolutional layers of the network have a large number of color selective neurons. Color opponency clearly emerges in the first layer, presenting 4 main axes (Black-White, Red-Cyan, Blue-Yellow and Magenta-Green), but this is reduced and rotated as we go deeper into the network. In layer 2 we find a denser hue sampling of color neurons and opponency is reduced almost to one new main axis, the Bluish-Orangish coinciding with the dataset bias. In layers 3, 4 and 5 color neurons are similar amongst themselves, presenting different type of neurons that detect specific colored objects (e.g., orangish faces), specific surrounds (e.g., blue sky) or specific colored or contrasted object-surround configurations (e.g. blue blob in a green surround). Overall, our work concludes that color and shape representation are successively entangled through all the layers of the studied network, revealing certain parallelisms with the reported evidences in primate brains that can provide useful insight into intermediate hierarchical spatio-chromatic representations. | ||||
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| Notes | CIC; 600.051; 600.087 | Approved | no | ||
| Call Number | Admin @ si @RaV2018 | Serial | 3114 | ||
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| Author | B. Gautam; Oriol Ramos Terrades; Joana Maria Pujadas-Mora; Miquel Valls-Figols | ||||
| Title | Knowledge graph based methods for record linkage | Type | Journal Article | ||
| Year | 2020 | Publication | Pattern Recognition Letters | Abbreviated Journal | PRL |
| Volume | 136 | Issue | Pages | 127-133 | |
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| Abstract | Nowadays, it is common in Historical Demography the use of individual-level data as a consequence of a predominant life-course approach for the understanding of the demographic behaviour, family transition, mobility, etc. Advanced record linkage is key since it allows increasing the data complexity and its volume to be analyzed. However, current methods are constrained to link data from the same kind of sources. Knowledge graph are flexible semantic representations, which allow to encode data variability and semantic relations in a structured manner.
In this paper we propose the use of knowledge graph methods to tackle record linkage tasks. The proposed method, named WERL, takes advantage of the main knowledge graph properties and learns embedding vectors to encode census information. These embeddings are properly weighted to maximize the record linkage performance. We have evaluated this method on benchmark data sets and we have compared it to related methods with stimulating and satisfactory results. |
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| Notes | DAG; 600.140; 600.121 | Approved | no | ||
| Call Number | Admin @ si @ GRP2020 | Serial | 3453 | ||
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| Author | Lluis Gomez; Ali Furkan Biten; Ruben Tito; Andres Mafla; Marçal Rusiñol; Ernest Valveny; Dimosthenis Karatzas | ||||
| Title | Multimodal grid features and cell pointers for scene text visual question answering | Type | Journal Article | ||
| Year | 2021 | Publication | Pattern Recognition Letters | Abbreviated Journal | PRL |
| Volume | 150 | Issue | Pages | 242-249 | |
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| Abstract | This paper presents a new model for the task of scene text visual question answering. In this task questions about a given image can only be answered by reading and understanding scene text. Current state of the art models for this task make use of a dual attention mechanism in which one attention module attends to visual features while the other attends to textual features. A possible issue with this is that it makes difficult for the model to reason jointly about both modalities. To fix this problem we propose a new model that is based on an single attention mechanism that attends to multi-modal features conditioned to the question. The output weights of this attention module over a grid of multi-modal spatial features are interpreted as the probability that a certain spatial location of the image contains the answer text to the given question. Our experiments demonstrate competitive performance in two standard datasets with a model that is faster than previous methods at inference time. Furthermore, we also provide a novel analysis of the ST-VQA dataset based on a human performance study. Supplementary material, code, and data is made available through this link. | ||||
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| Notes | DAG; 600.084; 600.121 | Approved | no | ||
| Call Number | Admin @ si @ GBT2021 | Serial | 3620 | ||
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| Author | Aitor Alvarez-Gila; Adrian Galdran; Estibaliz Garrote; Joost Van de Weijer | ||||
| Title | Self-supervised blur detection from synthetically blurred scenes | Type | Journal Article | ||
| Year | 2019 | Publication | Image and Vision Computing | Abbreviated Journal | IMAVIS |
| Volume | 92 | Issue | Pages | 103804 | |
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| Abstract | Blur detection aims at segmenting the blurred areas of a given image. Recent deep learning-based methods approach this problem by learning an end-to-end mapping between the blurred input and a binary mask representing the localization of its blurred areas. Nevertheless, the effectiveness of such deep models is limited due to the scarcity of datasets annotated in terms of blur segmentation, as blur annotation is labor intensive. In this work, we bypass the need for such annotated datasets for end-to-end learning, and instead rely on object proposals and a model for blur generation in order to produce a dataset of synthetically blurred images. This allows us to perform self-supervised learning over the generated image and ground truth blur mask pairs using CNNs, defining a framework that can be employed in purely self-supervised, weakly supervised or semi-supervised configurations. Interestingly, experimental results of such setups over the largest blur segmentation datasets available show that this approach achieves state of the art results in blur segmentation, even without ever observing any real blurred image. | ||||
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| Notes | LAMP; 600.109; 600.120 | Approved | no | ||
| Call Number | Admin @ si @ AGG2019 | Serial | 3301 | ||
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| Author | P. Canals; Simone Balocco; O. Diaz; J. Li; A. Garcia Tornel; M. Olive Gadea; M. Ribo | ||||
| Title | A fully automatic method for vascular tortuosity feature extraction in the supra-aortic region: unraveling possibilities in stroke treatment planning | Type | Journal Article | ||
| Year | 2023 | Publication | Computerized Medical Imaging and Graphics | Abbreviated Journal | CMIG |
| Volume | 104 | Issue | 102170 | Pages | |
| Keywords | Artificial intelligence; Deep learning; Stroke; Thrombectomy; Vascular feature extraction; Vascular tortuosity | ||||
| Abstract | Vascular tortuosity of supra-aortic vessels is widely considered one of the main reasons for failure and delays in endovascular treatment of large vessel occlusion in patients with acute ischemic stroke. Characterization of tortuosity is a challenging task due to the lack of objective, robust and effective analysis tools. We present a fully automatic method for arterial segmentation, vessel labelling and tortuosity feature extraction applied to the supra-aortic region. A sample of 566 computed tomography angiography scans from acute ischemic stroke patients (aged 74.8 ± 12.9, 51.0% females) were used for training, validation and testing of a segmentation module based on a U-Net architecture (162 cases) and a vessel labelling module powered by a graph U-Net (566 cases). Successively, 30 cases were processed for testing of a tortuosity feature extraction module. Measurements obtained through automatic processing were compared to manual annotations from two observers for a thorough validation of the method. The proposed feature extraction method presented similar performance to the inter-rater variability observed in the measurement of 33 geometrical and morphological features of the arterial anatomy in the supra-aortic region. This system will contribute to the development of more complex models to advance the treatment of stroke by adding immediate automation, objectivity, repeatability and robustness to the vascular tortuosity characterization of patients. | ||||
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| Notes | MILAB | Approved | no | ||
| Call Number | Admin @ si @ CBD2023 | Serial | 4005 | ||
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| Author | Katerine Diaz; Francesc J. Ferri; Aura Hernandez-Sabate | ||||
| Title | An overview of incremental feature extraction methods based on linear subspaces | Type | Journal Article | ||
| Year | 2018 | Publication | Knowledge-Based Systems | Abbreviated Journal | KBS |
| Volume | 145 | Issue | Pages | 219-235 | |
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| Abstract | With the massive explosion of machine learning in our day-to-day life, incremental and adaptive learning has become a major topic, crucial to keep up-to-date and improve classification models and their corresponding feature extraction processes. This paper presents a categorized overview of incremental feature extraction based on linear subspace methods which aim at incorporating new information to the already acquired knowledge without accessing previous data. Specifically, this paper focuses on those linear dimensionality reduction methods with orthogonal matrix constraints based on global loss function, due to the extensive use of their batch approaches versus other linear alternatives. Thus, we cover the approaches derived from Principal Components Analysis, Linear Discriminative Analysis and Discriminative Common Vector methods. For each basic method, its incremental approaches are differentiated according to the subspace model and matrix decomposition involved in the updating process. Besides this categorization, several updating strategies are distinguished according to the amount of data used to update and to the fact of considering a static or dynamic number of classes. Moreover, the specific role of the size/dimension ratio in each method is considered. Finally, computational complexity, experimental setup and the accuracy rates according to published results are compiled and analyzed, and an empirical evaluation is done to compare the best approach of each kind. | ||||
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| ISSN | 0950-7051 | ISBN | Medium | ||
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| Notes | ADAS; 600.118 | Approved | no | ||
| Call Number | Admin @ si @ DFH2018 | Serial | 3090 | ||
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| Author | F.Negin; Pau Rodriguez; M.Koperski; A.Kerboua; Jordi Gonzalez; J.Bourgeois; E.Chapoulie; P.Robert; F.Bremond | ||||
| Title | PRAXIS: Towards automatic cognitive assessment using gesture recognition | Type | Journal Article | ||
| Year | 2018 | Publication | Expert Systems with Applications | Abbreviated Journal | ESWA |
| Volume | 106 | Issue | Pages | 21-35 | |
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| Abstract | Praxis test is a gesture-based diagnostic test which has been accepted as diagnostically indicative of cortical pathologies such as Alzheimer’s disease. Despite being simple, this test is oftentimes skipped by the clinicians. In this paper, we propose a novel framework to investigate the potential of static and dynamic upper-body gestures based on the Praxis test and their potential in a medical framework to automatize the test procedures for computer-assisted cognitive assessment of older adults.
In order to carry out gesture recognition as well as correctness assessment of the performances we have recollected a novel challenging RGB-D gesture video dataset recorded by Kinect v2, which contains 29 specific gestures suggested by clinicians and recorded from both experts and patients performing the gesture set. Moreover, we propose a framework to learn the dynamics of upper-body gestures, considering the videos as sequences of short-term clips of gestures. Our approach first uses body part detection to extract image patches surrounding the hands and then, by means of a fine-tuned convolutional neural network (CNN) model, it learns deep hand features which are then linked to a long short-term memory to capture the temporal dependencies between video frames. We report the results of four developed methods using different modalities. The experiments show effectiveness of our deep learning based approach in gesture recognition and performance assessment tasks. Satisfaction of clinicians from the assessment reports indicates the impact of framework corresponding to the diagnosis. |
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| Notes | ISE | Approved | no | ||
| Call Number | Admin @ si @ NRK2018 | Serial | 3669 | ||
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