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Author Domicele Jonauskaite; Lucia Camenzind; C. Alejandro Parraga; Cecile N Diouf; Mathieu Mercapide Ducommun; Lauriane Müller; Melanie Norberg; Christine Mohr edit  url
doi  openurl
  Title Colour-emotion associations in individuals with red-green colour blindness Type (down) Journal Article
  Year 2021 Publication PeerJ Abbreviated Journal  
  Volume 9 Issue Pages e11180  
  Keywords Affect; Chromotherapy; Colour cognition; Colour vision deficiency; Cross-modal correspondences; Daltonism; Deuteranopia; Dichromatic; Emotion; Protanopia.  
  Abstract Colours and emotions are associated in languages and traditions. Some of us may convey sadness by saying feeling blue or by wearing black clothes at funerals. The first example is a conceptual experience of colour and the second example is an immediate perceptual experience of colour. To investigate whether one or the other type of experience more strongly drives colour-emotion associations, we tested 64 congenitally red-green colour-blind men and 66 non-colour-blind men. All participants associated 12 colours, presented as terms or patches, with 20 emotion concepts, and rated intensities of the associated emotions. We found that colour-blind and non-colour-blind men associated similar emotions with colours, irrespective of whether colours were conveyed via terms (r = .82) or patches (r = .80). The colour-emotion associations and the emotion intensities were not modulated by participants' severity of colour blindness. Hinting at some additional, although minor, role of actual colour perception, the consistencies in associations for colour terms and patches were higher in non-colour-blind than colour-blind men. Together, these results suggest that colour-emotion associations in adults do not require immediate perceptual colour experiences, as conceptual experiences are sufficient.  
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  Notes CIC; LAMP; 600.120; 600.128 Approved no  
  Call Number Admin @ si @ JCP2021 Serial 3564  
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Author Sanket Biswas; Pau Riba; Josep Llados; Umapada Pal edit   pdf
url  doi
openurl 
  Title Beyond Document Object Detection: Instance-Level Segmentation of Complex Layouts Type (down) Journal Article
  Year 2021 Publication International Journal on Document Analysis and Recognition Abbreviated Journal IJDAR  
  Volume 24 Issue Pages 269–281  
  Keywords  
  Abstract Information extraction is a fundamental task of many business intelligence services that entail massive document processing. Understanding a document page structure in terms of its layout provides contextual support which is helpful in the semantic interpretation of the document terms. In this paper, inspired by the progress of deep learning methodologies applied to the task of object recognition, we transfer these models to the specific case of document object detection, reformulating the traditional problem of document layout analysis. Moreover, we importantly contribute to prior arts by defining the task of instance segmentation on the document image domain. An instance segmentation paradigm is especially important in complex layouts whose contents should interact for the proper rendering of the page, i.e., the proper text wrapping around an image. Finally, we provide an extensive evaluation, both qualitative and quantitative, that demonstrates the superior performance of the proposed methodology over the current state of the art.  
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  Notes DAG; 600.121; 600.140; 110.312 Approved no  
  Call Number Admin @ si @ BRL2021b Serial 3574  
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Author Diego Velazquez; Pau Rodriguez; Josep M. Gonfaus; Xavier Roca; Jordi Gonzalez edit  url
openurl 
  Title A Closer Look at Embedding Propagation for Manifold Smoothing Type (down) Journal Article
  Year 2022 Publication Journal of Machine Learning Research Abbreviated Journal JMLR  
  Volume 23 Issue 252 Pages 1-27  
  Keywords Regularization; emi-supervised learning; self-supervised learning; adversarial robustness; few-shot classification  
  Abstract Supervised training of neural networks requires a large amount of manually annotated data and the resulting networks tend to be sensitive to out-of-distribution (OOD) data.
Self- and semi-supervised training schemes reduce the amount of annotated data required during the training process. However, OOD generalization remains a major challenge for most methods. Strategies that promote smoother decision boundaries play an important role in out-of-distribution generalization. For example, embedding propagation (EP) for manifold smoothing has recently shown to considerably improve the OOD performance for few-shot classification. EP achieves smoother class manifolds by building a graph from sample embeddings and propagating information through the nodes in an unsupervised manner. In this work, we extend the original EP paper providing additional evidence and experiments showing that it attains smoother class embedding manifolds and improves results in settings beyond few-shot classification. Concretely, we show that EP improves the robustness of neural networks against multiple adversarial attacks as well as semi- and
self-supervised learning performance.
 
  Address 9/2022  
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  Notes Approved no  
  Call Number Admin @ si @ VRG2022 Serial 3762  
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Author Kai Wang; Joost Van de Weijer; Luis Herranz edit   pdf
url  openurl
  Title ACAE-REMIND for online continual learning with compressed feature replay Type (down) Journal Article
  Year 2021 Publication Pattern Recognition Letters Abbreviated Journal PRL  
  Volume 150 Issue Pages 122-129  
  Keywords online continual learning; autoencoders; vector quantization  
  Abstract Online continual learning aims to learn from a non-IID stream of data from a number of different tasks, where the learner is only allowed to consider data once. Methods are typically allowed to use a limited buffer to store some of the images in the stream. Recently, it was found that feature replay, where an intermediate layer representation of the image is stored (or generated) leads to superior results than image replay, while requiring less memory. Quantized exemplars can further reduce the memory usage. However, a drawback of these methods is that they use a fixed (or very intransigent) backbone network. This significantly limits the learning of representations that can discriminate between all tasks. To address this problem, we propose an auxiliary classifier auto-encoder (ACAE) module for feature replay at intermediate layers with high compression rates. The reduced memory footprint per image allows us to save more exemplars for replay. In our experiments, we conduct task-agnostic evaluation under online continual learning setting and get state-of-the-art performance on ImageNet-Subset, CIFAR100 and CIFAR10 dataset.  
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  Notes LAMP; 600.147; 601.379; 600.120; 600.141 Approved no  
  Call Number Admin @ si @ WWH2021 Serial 3575  
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Author Hannes Mueller; Andre Groeger; Jonathan Hersh; Andrea Matranga; Joan Serrat edit   pdf
url  doi
openurl 
  Title Monitoring war destruction from space using machine learning Type (down) Journal Article
  Year 2021 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal PNAS  
  Volume 118 Issue 23 Pages e2025400118  
  Keywords  
  Abstract Existing data on building destruction in conflict zones rely on eyewitness reports or manual detection, which makes it generally scarce, incomplete, and potentially biased. This lack of reliable data imposes severe limitations for media reporting, humanitarian relief efforts, human-rights monitoring, reconstruction initiatives, and academic studies of violent conflict. This article introduces an automated method of measuring destruction in high-resolution satellite images using deep-learning techniques combined with label augmentation and spatial and temporal smoothing, which exploit the underlying spatial and temporal structure of destruction. As a proof of concept, we apply this method to the Syrian civil war and reconstruct the evolution of damage in major cities across the country. Our approach allows generating destruction data with unprecedented scope, resolution, and frequency—and makes use of the ever-higher frequency at which satellite imagery becomes available.  
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  Notes ADAS; 600.118 Approved no  
  Call Number Admin @ si @ MGH2021 Serial 3584  
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Author Zhengying Liu; Adrien Pavao; Zhen Xu; Sergio Escalera; Fabio Ferreira; Isabelle Guyon; Sirui Hong; Frank Hutter; Rongrong Ji; Julio C. S. Jacques Junior; Ge Li; Marius Lindauer; Zhipeng Luo; Meysam Madadi; Thomas Nierhoff; Kangning Niu; Chunguang Pan; Danny Stoll; Sebastien Treguer; Jin Wang; Peng Wang; Chenglin Wu; Youcheng Xiong; Arber Zela; Yang Zhang edit  url
doi  openurl
  Title Winning Solutions and Post-Challenge Analyses of the ChaLearn AutoDL Challenge 2019 Type (down) Journal Article
  Year 2021 Publication IEEE Transactions on Pattern Analysis and Machine Intelligence Abbreviated Journal TPAMI  
  Volume 43 Issue 9 Pages 3108 - 3125  
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  Abstract This paper reports the results and post-challenge analyses of ChaLearn's AutoDL challenge series, which helped sorting out a profusion of AutoML solutions for Deep Learning (DL) that had been introduced in a variety of settings, but lacked fair comparisons. All input data modalities (time series, images, videos, text, tabular) were formatted as tensors and all tasks were multi-label classification problems. Code submissions were executed on hidden tasks, with limited time and computational resources, pushing solutions that get results quickly. In this setting, DL methods dominated, though popular Neural Architecture Search (NAS) was impractical. Solutions relied on fine-tuned pre-trained networks, with architectures matching data modality. Post-challenge tests did not reveal improvements beyond the imposed time limit. While no component is particularly original or novel, a high level modular organization emerged featuring a “meta-learner”, “data ingestor”, “model selector”, “model/learner”, and “evaluator”. This modularity enabled ablation studies, which revealed the importance of (off-platform) meta-learning, ensembling, and efficient data management. Experiments on heterogeneous module combinations further confirm the (local) optimality of the winning solutions. Our challenge legacy includes an ever-lasting benchmark (http://autodl.chalearn.org), the open-sourced code of the winners, and a free “AutoDL self-service.”  
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  Notes HUPBA; no proj Approved no  
  Call Number Admin @ si @ LPX2021 Serial 3587  
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Author Guillermo Torres; Debora Gil edit  openurl
  Title A multi-shape loss function with adaptive class balancing for the segmentation of lung structures Type (down) Journal Article
  Year 2020 Publication International Journal of Computer Assisted Radiology and Surgery Abbreviated Journal IJCAR  
  Volume 15 Issue 1 Pages S154-55  
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  Notes IAM Approved no  
  Call Number Admin @ si @ ToG2020 Serial 3590  
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Author Sonia Baeza; R.Domingo; M.Salcedo; G.Moragas; J.Deportos; I.Garcia Olive; Carles Sanchez; Debora Gil; Antoni Rosell edit  url
openurl 
  Title Artificial Intelligence to Optimize Pulmonary Embolism Diagnosis During Covid-19 Pandemic by Perfusion SPECT/CT, a Pilot Study Type (down) Journal Article
  Year 2021 Publication American Journal of Respiratory and Critical Care Medicine Abbreviated Journal  
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  Notes IAM; 600.145 Approved no  
  Call Number Admin @ si @ BDS2021 Serial 3591  
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Author Mireia Sole; Joan Blanco; Debora Gil; Oliver Valero; Alvaro Pascual; B. Cardenas; G. Fonseka; E. Anton; Richard Frodsham; Francesca Vidal; Zaida Sarrate edit  url
openurl 
  Title Chromosomal positioning in spermatogenic cells is influenced by chromosomal factors associated with gene activity, bouquet formation, and meiotic sex-chromosome inactivation Type (down) Journal Article
  Year 2021 Publication Chromosoma Abbreviated Journal  
  Volume 130 Issue Pages 163-175  
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  Abstract Chromosome territoriality is not random along the cell cycle and it is mainly governed by intrinsic chromosome factors and gene expression patterns. Conversely, very few studies have explored the factors that determine chromosome territoriality and its influencing factors during meiosis. In this study, we analysed chromosome positioning in murine spermatogenic cells using three-dimensionally fluorescence in situ hybridization-based methodology, which allows the analysis of the entire karyotype. The main objective of the study was to decipher chromosome positioning in a radial axis (all analysed germ-cell nuclei) and longitudinal axis (only spermatozoa) and to identify the chromosomal factors that regulate such an arrangement. Results demonstrated that the radial positioning of chromosomes during spermatogenesis was cell-type specific and influenced by chromosomal factors associated to gene activity. Chromosomes with specific features that enhance transcription (high GC content, high gene density and high numbers of predicted expressed genes) were preferentially observed in the inner part of the nucleus in virtually all cell types. Moreover, the position of the sex chromosomes was influenced by their transcriptional status, from the periphery of the nucleus when its activity was repressed (pachytene) to a more internal position when it is partially activated (spermatid). At pachytene, chromosome positioning was also influenced by chromosome size due to the bouquet formation. Longitudinal chromosome positioning in the sperm nucleus was not random either, suggesting the importance of ordered longitudinal positioning for the release and activation of the paternal genome after fertilisation.  
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  Notes IAM; 600.145 Approved no  
  Call Number Admin @ si @ SBG2021 Serial 3592  
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Author Marta Ligero; Alonso Garcia Ruiz; Cristina Viaplana; Guillermo Villacampa; Maria V Raciti; Jaid Landa; Ignacio Matos; Juan Martin Liberal; Maria Ochoa de Olza; Cinta Hierro; Joaquin Mateo; Macarena Gonzalez; Rafael Morales Barrera; Cristina Suarez; Jordi Rodon; Elena Elez; Irene Braña; Eva Muñoz-Couselo; Ana Oaknin; Roberta Fasani; Paolo Nuciforo; Debora Gil; Carlota Rubio Perez; Joan Seoane; Enriqueta Felip; Manuel Escobar; Josep Tabernero; Joan Carles; Rodrigo Dienstmann; Elena Garralda; Raquel Perez Lopez edit  url
doi  openurl
  Title A CT-based radiomics signature is associated with response to immune checkpoint inhibitors in advanced solid tumors Type (down) Journal Article
  Year 2021 Publication Radiology Abbreviated Journal  
  Volume 299 Issue 1 Pages 109-119  
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  Abstract Background Reliable predictive imaging markers of response to immune checkpoint inhibitors are needed. Purpose To develop and validate a pretreatment CT-based radiomics signature to predict response to immune checkpoint inhibitors in advanced solid tumors. Materials and Methods In this retrospective study, a radiomics signature was developed in patients with advanced solid tumors (including breast, cervix, gastrointestinal) treated with anti-programmed cell death-1 or programmed cell death ligand-1 monotherapy from August 2012 to May 2018 (cohort 1). This was tested in patients with bladder and lung cancer (cohorts 2 and 3). Radiomics variables were extracted from all metastases delineated at pretreatment CT and selected by using an elastic-net model. A regression model combined radiomics and clinical variables with response as the end point. Biologic validation of the radiomics score with RNA profiling of cytotoxic cells (cohort 4) was assessed with Mann-Whitney analysis. Results The radiomics signature was developed in 85 patients (cohort 1: mean age, 58 years ± 13 [standard deviation]; 43 men) and tested on 46 patients (cohort 2: mean age, 70 years ± 12; 37 men) and 47 patients (cohort 3: mean age, 64 years ± 11; 40 men). Biologic validation was performed in a further cohort of 20 patients (cohort 4: mean age, 60 years ± 13; 14 men). The radiomics signature was associated with clinical response to immune checkpoint inhibitors (area under the curve [AUC], 0.70; 95% CI: 0.64, 0.77; P < .001). In cohorts 2 and 3, the AUC was 0.67 (95% CI: 0.58, 0.76) and 0.67 (95% CI: 0.56, 0.77; P < .001), respectively. A radiomics-clinical signature (including baseline albumin level and lymphocyte count) improved on radiomics-only performance (AUC, 0.74 [95% CI: 0.63, 0.84; P < .001]; Akaike information criterion, 107.00 and 109.90, respectively). Conclusion A pretreatment CT-based radiomics signature is associated with response to immune checkpoint inhibitors, likely reflecting the tumor immunophenotype. © RSNA, 2021 Online supplemental material is available for this article. See also the editorial by Summers in this issue.  
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  Notes IAM; 600.145 Approved no  
  Call Number Admin @ si @ LGV2021 Serial 3593  
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Author Trevor Canham; Javier Vazquez; Elise Mathieu; Marcelo Bertalmío edit   pdf
url  doi
openurl 
  Title Matching visual induction effects on screens of different size Type (down) Journal Article
  Year 2021 Publication Journal of Vision Abbreviated Journal JOV  
  Volume 21 Issue 6(10) Pages 1-22  
  Keywords  
  Abstract In the film industry, the same movie is expected to be watched on displays of vastly different sizes, from cinema screens to mobile phones. But visual induction, the perceptual phenomenon by which the appearance of a scene region is affected by its surroundings, will be different for the same image shown on two displays of different dimensions. This phenomenon presents a practical challenge for the preservation of the artistic intentions of filmmakers, because it can lead to shifts in image appearance between viewing destinations. In this work, we show that a neural field model based on the efficient representation principle is able to predict induction effects and how, by regularizing its associated energy functional, the model is still able to represent induction but is now invertible. From this finding, we propose a method to preprocess an image in a screen–size dependent way so that its perception, in terms of visual induction, may remain constant across displays of different size. The potential of the method is demonstrated through psychophysical experiments on synthetic images and qualitative examples on natural images.  
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  Notes CIC Approved no  
  Call Number Admin @ si @ CVM2021 Serial 3595  
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Author Pau Riba; Andreas Fischer; Josep Llados; Alicia Fornes edit   pdf
url  openurl
  Title Learning graph edit distance by graph neural networks Type (down) Journal Article
  Year 2021 Publication Pattern Recognition Abbreviated Journal PR  
  Volume 120 Issue Pages 108132  
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  Abstract The emergence of geometric deep learning as a novel framework to deal with graph-based representations has faded away traditional approaches in favor of completely new methodologies. In this paper, we propose a new framework able to combine the advances on deep metric learning with traditional approximations of the graph edit distance. Hence, we propose an efficient graph distance based on the novel field of geometric deep learning. Our method employs a message passing neural network to capture the graph structure, and thus, leveraging this information for its use on a distance computation. The performance of the proposed graph distance is validated on two different scenarios. On the one hand, in a graph retrieval of handwritten words i.e. keyword spotting, showing its superior performance when compared with (approximate) graph edit distance benchmarks. On the other hand, demonstrating competitive results for graph similarity learning when compared with the current state-of-the-art on a recent benchmark dataset.  
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  Notes DAG; 600.140; 600.121 Approved no  
  Call Number Admin @ si @ RFL2021 Serial 3611  
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Author Lei Kang; Pau Riba; Marcal Rusinol; Alicia Fornes; Mauricio Villegas edit  url
doi  openurl
  Title Content and Style Aware Generation of Text-line Images for Handwriting Recognition Type (down) Journal Article
  Year 2021 Publication IEEE Transactions on Pattern Analysis and Machine Intelligence Abbreviated Journal TPAMI  
  Volume Issue Pages  
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  Abstract Handwritten Text Recognition has achieved an impressive performance in public benchmarks. However, due to the high inter- and intra-class variability between handwriting styles, such recognizers need to be trained using huge volumes of manually labeled training data. To alleviate this labor-consuming problem, synthetic data produced with TrueType fonts has been often used in the training loop to gain volume and augment the handwriting style variability. However, there is a significant style bias between synthetic and real data which hinders the improvement of recognition performance. To deal with such limitations, we propose a generative method for handwritten text-line images, which is conditioned on both visual appearance and textual content. Our method is able to produce long text-line samples with diverse handwriting styles. Once properly trained, our method can also be adapted to new target data by only accessing unlabeled text-line images to mimic handwritten styles and produce images with any textual content. Extensive experiments have been done on making use of the generated samples to boost Handwritten Text Recognition performance. Both qualitative and quantitative results demonstrate that the proposed approach outperforms the current state of the art.  
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  Notes DAG; 600.140; 600.121 Approved no  
  Call Number Admin @ si @ KRR2021 Serial 3612  
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Author S.K. Jemni; Mohamed Ali Souibgui; Yousri Kessentini; Alicia Fornes edit  url
openurl 
  Title Enhance to Read Better: A Multi-Task Adversarial Network for Handwritten Document Image Enhancement Type (down) Journal Article
  Year 2022 Publication Pattern Recognition Abbreviated Journal PR  
  Volume 123 Issue Pages 108370  
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  Abstract Handwritten document images can be highly affected by degradation for different reasons: Paper ageing, daily-life scenarios (wrinkles, dust, etc.), bad scanning process and so on. These artifacts raise many readability issues for current Handwritten Text Recognition (HTR) algorithms and severely devalue their efficiency. In this paper, we propose an end to end architecture based on Generative Adversarial Networks (GANs) to recover the degraded documents into a and form. Unlike the most well-known document binarization methods, which try to improve the visual quality of the degraded document, the proposed architecture integrates a handwritten text recognizer that promotes the generated document image to be more readable. To the best of our knowledge, this is the first work to use the text information while binarizing handwritten documents. Extensive experiments conducted on degraded Arabic and Latin handwritten documents demonstrate the usefulness of integrating the recognizer within the GAN architecture, which improves both the visual quality and the readability of the degraded document images. Moreover, we outperform the state of the art in H-DIBCO challenges, after fine tuning our pre-trained model with synthetically degraded Latin handwritten images, on this task.  
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  Notes DAG; 600.124; 600.121; 602.230 Approved no  
  Call Number Admin @ si @ JSK2022 Serial 3613  
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Author Lluis Gomez; Ali Furkan Biten; Ruben Tito; Andres Mafla; Marçal Rusiñol; Ernest Valveny; Dimosthenis Karatzas edit   pdf
url  openurl
  Title Multimodal grid features and cell pointers for scene text visual question answering Type (down) Journal Article
  Year 2021 Publication Pattern Recognition Letters Abbreviated Journal PRL  
  Volume 150 Issue Pages 242-249  
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  Abstract This paper presents a new model for the task of scene text visual question answering. In this task questions about a given image can only be answered by reading and understanding scene text. Current state of the art models for this task make use of a dual attention mechanism in which one attention module attends to visual features while the other attends to textual features. A possible issue with this is that it makes difficult for the model to reason jointly about both modalities. To fix this problem we propose a new model that is based on an single attention mechanism that attends to multi-modal features conditioned to the question. The output weights of this attention module over a grid of multi-modal spatial features are interpreted as the probability that a certain spatial location of the image contains the answer text to the given question. Our experiments demonstrate competitive performance in two standard datasets with a model that is faster than previous methods at inference time. Furthermore, we also provide a novel analysis of the ST-VQA dataset based on a human performance study. Supplementary material, code, and data is made available through this link.  
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  Notes DAG; 600.084; 600.121 Approved no  
  Call Number Admin @ si @ GBT2021 Serial 3620  
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