Frederic Sampedro, Anna Domenech, & Sergio Escalera. (2014). Static and dynamic computational cancer spread quantification in whole body FDG-PET/CT scans. JMIHI - Journal of Medical Imaging and Health Informatics, 4(6), 825–831.
Abstract: In this work we address the computational cancer spread quantification scenario in whole body FDG-PET/CT scans. At the static level, this setting can be modeled as a clustering problem on the set of 3D connected components of the whole body PET tumoral segmentation mask carried out by nuclear medicine physicians. At the dynamic level, and ad-hoc algorithm is proposed in order to quantify the cancer spread time evolution which, when combined with other existing indicators, gives rise to the metabolic tumor volume-aggressiveness-spread time evolution chart, a novel tool that we claim that would prove useful in nuclear medicine and oncological clinical or research scenarios. Good performance results of the proposed methodologies both at the clinical and technological level are shown using a dataset of 48 segmented whole body FDG-PET/CT scans.
Keywords: CANCER SPREAD; COMPUTER AIDED DIAGNOSIS; MEDICAL IMAGING; TUMOR QUANTIFICATION
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Alvaro Cepero, Albert Clapes, & Sergio Escalera. (2015). Automatic non-verbal communication skills analysis: a quantitative evaluation. AIC - AI Communications, 28(1), 87–101.
Abstract: The oral communication competence is defined on the top of the most relevant skills for one's professional and personal life. Because of the importance of communication in our activities of daily living, it is crucial to study methods to evaluate and provide the necessary feedback that can be used in order to improve these communication capabilities and, therefore, learn how to express ourselves better. In this work, we propose a system capable of evaluating quantitatively the quality of oral presentations in an automatic fashion. The system is based on a multi-modal RGB, depth, and audio data description and a fusion approach in order to recognize behavioral cues and train classifiers able to eventually predict communication quality levels. The performance of the proposed system is tested on a novel dataset containing Bachelor thesis' real defenses, presentations from an 8th semester Bachelor courses, and Master courses' presentations at Universitat de Barcelona. Using as groundtruth the marks assigned by actual instructors, our system achieves high performance categorizing and ranking presentations by their quality, and also making real-valued mark predictions.
Keywords: Social signal processing; human behavior analysis; multi-modal data description; multi-modal data fusion; non-verbal communication analysis; e-Learning
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Frederic Sampedro, Sergio Escalera, & Anna Puig. (2014). Iterative Multiclass Multiscale Stacked Sequential Learning: definition and application to medical volume segmentation. PRL - Pattern Recognition Letters, 46, 1–10.
Abstract: In this work we present the iterative multi-class multi-scale stacked sequential learning framework (IMMSSL), a novel learning scheme that is particularly suited for medical volume segmentation applications. This model exploits the inherent voxel contextual information of the structures of interest in order to improve its segmentation performance results. Without any feature set or learning algorithm prior assumption, the proposed scheme directly seeks to learn the contextual properties of a region from the predicted classifications of previous classifiers within an iterative scheme. Performance results regarding segmentation accuracy in three two-class and multi-class medical volume datasets show a significant improvement with respect to state of the art alternatives. Due to its easiness of implementation and its independence of feature space and learning algorithm, the presented machine learning framework could be taken into consideration as a first choice in complex volume segmentation scenarios.
Keywords: Machine learning; Sequential learning; Multi-class problems; Contextual learning; Medical volume segmentation
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Frederic Sampedro, & Sergio Escalera. (2015). Spatial codification of label predictions in Multi-scale Stacked Sequential Learning: A case study on multi-class medical volume segmentation. IETCV - IET Computer Vision, 9(3), 439–446.
Abstract: In this study, the authors propose the spatial codification of label predictions within the multi-scale stacked sequential learning (MSSL) framework, a successful learning scheme to deal with non-independent identically distributed data entries. After providing a motivation for this objective, they describe its theoretical framework based on the introduction of the blurred shape model as a smart descriptor to codify the spatial distribution of the predicted labels and define the new extended feature set for the second stacked classifier. They then particularise this scheme to be applied in volume segmentation applications. Finally, they test the implementation of the proposed framework in two medical volume segmentation datasets, obtaining significant performance improvements (with a 95% of confidence) in comparison to standard Adaboost classifier and classical MSSL approaches.
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Daniel Sanchez, Miguel Angel Bautista, & Sergio Escalera. (2015). HuPBA 8k+: Dataset and ECOC-GraphCut based Segmentation of Human Limbs. NEUCOM - Neurocomputing, 150(A), 173–188.
Abstract: Human multi-limb segmentation in RGB images has attracted a lot of interest in the research community because of the huge amount of possible applications in fields like Human-Computer Interaction, Surveillance, eHealth, or Gaming. Nevertheless, human multi-limb segmentation is a very hard task because of the changes in appearance produced by different points of view, clothing, lighting conditions, occlusions, and number of articulations of the human body. Furthermore, this huge pose variability makes the availability of large annotated datasets difficult. In this paper, we introduce the HuPBA8k+ dataset. The dataset contains more than 8000 labeled frames at pixel precision, including more than 120000 manually labeled samples of 14 different limbs. For completeness, the dataset is also labeled at frame-level with action annotations drawn from an 11 action dictionary which includes both single person actions and person-person interactive actions. Furthermore, we also propose a two-stage approach for the segmentation of human limbs. In a first stage, human limbs are trained using cascades of classifiers to be split in a tree-structure way, which is included in an Error-Correcting Output Codes (ECOC) framework to define a body-like probability map. This map is used to obtain a binary mask of the subject by means of GMM color modelling and GraphCuts theory. In a second stage, we embed a similar tree-structure in an ECOC framework to build a more accurate set of limb-like probability maps within the segmented user mask, that are fed to a multi-label GraphCut procedure to obtain final multi-limb segmentation. The methodology is tested on the novel HuPBA8k+ dataset, showing performance improvements in comparison to state-of-the-art approaches. In addition, a baseline of standard action recognition methods for the 11 actions categories of the novel dataset is also provided.
Keywords: Human limb segmentation; ECOC; Graph-Cuts
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Eloi Puertas, Miguel Angel Bautista, Daniel Sanchez, Sergio Escalera, & Oriol Pujol. (2014). Learning to Segment Humans by Stacking their Body Parts,. In ECCV Workshop on ChaLearn Looking at People (Vol. 8925, pp. 685–697). LNCS.
Abstract: Human segmentation in still images is a complex task due to the wide range of body poses and drastic changes in environmental conditions. Usually, human body segmentation is treated in a two-stage fashion. First, a human body part detection step is performed, and then, human part detections are used as prior knowledge to be optimized by segmentation strategies. In this paper, we present a two-stage scheme based on Multi-Scale Stacked Sequential Learning (MSSL). We define an extended feature set by stacking a multi-scale decomposition of body
part likelihood maps. These likelihood maps are obtained in a first stage
by means of a ECOC ensemble of soft body part detectors. In a second stage, contextual relations of part predictions are learnt by a binary classifier, obtaining an accurate body confidence map. The obtained confidence map is fed to a graph cut optimization procedure to obtain the final segmentation. Results show improved segmentation when MSSL is included in the human segmentation pipeline.
Keywords: Human body segmentation; Stacked Sequential Learning
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Miguel Oliveira, Angel Sappa, & Victor Santos. (2015). A probabilistic approach for color correction in image mosaicking applications. TIP - IEEE Transactions on Image Processing, 14(2), 508–523.
Abstract: Image mosaicking applications require both geometrical and photometrical registrations between the images that compose the mosaic. This paper proposes a probabilistic color correction algorithm for correcting the photometrical disparities. First, the image to be color corrected is segmented into several regions using mean shift. Then, connected regions are extracted using a region fusion algorithm. Local joint image histograms of each region are modeled as collections of truncated Gaussians using a maximum likelihood estimation procedure. Then, local color palette mapping functions are computed using these sets of Gaussians. The color correction is performed by applying those functions to all the regions of the image. An extensive comparison with ten other state of the art color correction algorithms is presented, using two different image pair data sets. Results show that the proposed approach obtains the best average scores in both data sets and evaluation metrics and is also the most robust to failures.
Keywords: Color correction; image mosaicking; color transfer; color palette mapping functions
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G. Zahnd, Simone Balocco, A. Serusclat, P. Moulin, M. Orkisz, & D. Vray. (2015). Progressive attenuation of the longitudinal kinetics in the common carotid artery: preliminary in vivo assessment Ultrasound in Medicine and Biology. UMB - Ultrasound in Medicine and Biology, 41(1), 339–345.
Abstract: Longitudinal kinetics (LOKI) of the arterial wall consists of the shearing motion of the intima-media complex over the adventitia layer in the direction parallel to the blood flow during the cardiac cycle. The aim of this study was to investigate the local variability of LOKI amplitude along the length of the vessel. By use of a previously validated motion-estimation framework, 35 in vivo longitudinal B-mode ultrasound cine loops of healthy common carotid arteries were analyzed. Results indicated that LOKI amplitude is progressively attenuated along the length of the artery, as it is larger in regions located on the proximal side of the image (i.e., toward the heart) and smaller in regions located on the distal side of the image (i.e., toward the head), with an average attenuation coefficient of -2.5 ± 2.0%/mm. Reported for the first time in this study, this phenomenon is likely to be of great importance in improving understanding of atherosclerosis mechanisms, and has the potential to be a novel index of arterial stiffness.
Keywords: Arterial stiffness; Atherosclerosis; Common carotid artery; Longitudinal kinetics; Motion tracking; Ultrasound imaging
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G. Lisanti, I. Masi, Andrew Bagdanov, & Alberto del Bimbo. (2015). Person Re-identification by Iterative Re-weighted Sparse Ranking. TPAMI - IEEE Transactions on Pattern Analysis and Machine Intelligence, 37(8), 1629–1642.
Abstract: In this paper we introduce a method for person re-identification based on discriminative, sparse basis expansions of targets in terms of a labeled gallery of known individuals. We propose an iterative extension to sparse discriminative classifiers capable of ranking many candidate targets. The approach makes use of soft- and hard- re-weighting to redistribute energy among the most relevant contributing elements and to ensure that the best candidates are ranked at each iteration. Our approach also leverages a novel visual descriptor which we show to be discriminative while remaining robust to pose and illumination variations. An extensive comparative evaluation is given demonstrating that our approach achieves state-of-the-art performance on single- and multi-shot person re-identification scenarios on the VIPeR, i-LIDS, ETHZ, and CAVIAR4REID datasets. The combination of our descriptor and iterative sparse basis expansion improves state-of-the-art rank-1 performance by six percentage points on VIPeR and by 20 on CAVIAR4REID compared to other methods with a single gallery image per person. With multiple gallery and probe images per person our approach improves by 17 percentage points the state-of-the-art on i-LIDS and by 72 on CAVIAR4REID at rank-1. The approach is also quite efficient, capable of single-shot person re-identification over galleries containing hundreds of individuals at about 30 re-identifications per second.
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Marc Bolaños, Maite Garolera, & Petia Radeva. (2014). Video Segmentation of Life-Logging Videos. In 8th Conference on Articulated Motion and Deformable Objects (Vol. 8563, pp. 1–9).
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Francesco Brughi, Debora Gil, Llorenç Badiella, Eva Jove Casabella, & Oriol Ramos Terrades. (2014). Exploring the impact of inter-query variability on the performance of retrieval systems. In 11th International Conference on Image Analysis and Recognition (Vol. 8814, 413–420). LNCS. Springer International Publishing.
Abstract: This paper introduces a framework for evaluating the performance of information retrieval systems. Current evaluation metrics provide an average score that does not consider performance variability across the query set. In this manner, conclusions lack of any statistical significance, yielding poor inference to cases outside the query set and possibly unfair comparisons. We propose to apply statistical methods in order to obtain a more informative measure for problems in which different query classes can be identified. In this context, we assess the performance variability on two levels: overall variability across the whole query set and specific query class-related variability. To this end, we estimate confidence bands for precision-recall curves, and we apply ANOVA in order to assess the significance of the performance across different query classes.
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Debora Gil, David Roche, Agnes Borras, & Jesus Giraldo. (2015). Terminating Evolutionary Algorithms at their Steady State. COA - Computational Optimization and Applications, 61(2), 489–515.
Abstract: Assessing the reliability of termination conditions for evolutionary algorithms (EAs) is of prime importance. An erroneous or weak stop criterion can negatively affect both the computational effort and the final result. We introduce a statistical framework for assessing whether a termination condition is able to stop an EA at its steady state, so that its results can not be improved anymore. We use a regression model in order to determine the requirements ensuring that a measure derived from EA evolving population is related to the distance to the optimum in decision variable space. Our framework is analyzed across 24 benchmark test functions and two standard termination criteria based on function fitness value in objective function space and EA population decision variable space distribution for the differential evolution (DE) paradigm. Results validate our framework as a powerful tool for determining the capability of a measure for terminating EA and the results also identify the decision variable space distribution as the best-suited for accurately terminating DE in real-world applications.
Keywords: Evolutionary algorithms; Termination condition; Steady state; Differential evolution
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Marcelo D. Pistarelli, Angel Sappa, & Ricardo Toledo. (2013). Multispectral Stereo Image Correspondence. In 15th International Conference on Computer Analysis of Images and Patterns (Vol. 8048, pp. 217–224). LNCS. Springer Berlin Heidelberg.
Abstract: This paper presents a novel multispectral stereo image correspondence approach. It is evaluated using a stereo rig constructed with a visible spectrum camera and a long wave infrared spectrum camera. The novelty of the proposed approach lies on the usage of Hough space as a correspondence search domain. In this way it avoids searching for correspondence in the original multispectral image domains, where information is low correlated, and a common domain is used. The proposed approach is intended to be used in outdoor urban scenarios, where images contain large amount of edges. These edges are used as distinctive characteristics for the matching in the Hough space. Experimental results are provided showing the validity of the proposed approach.
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Gioacchino Vino, & Angel Sappa. (2013). Revisiting Harris Corner Detector Algorithm: a Gradual Thresholding Approach. In 10th International Conference on Image Analysis and Recognition (Vol. 7950, pp. 354–363). LNCS. Springer Berlin Heidelberg.
Abstract: This paper presents an adaptive thresholding approach intended to increase the number of detected corners, while reducing the amount of those ones corresponding to noisy data. The proposed approach works by using the classical Harris corner detector algorithm and overcome the difficulty in finding a general threshold that work well for all the images in a given data set by proposing a novel adaptive thresholding scheme. Initially, two thresholds are used to discern between strong corners and flat regions. Then, a region based criteria is used to discriminate between weak corners and noisy points in the midway interval. Experimental results show that the proposed approach has a better capability to reject false corners and, at the same time, to detect weak ones. Comparisons with the state of the art are provided showing the validity of the proposed approach.
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Francisco Blanco, Felipe Lumbreras, Joan Serrat, Roswitha Siener, Silvia Serranti, Giuseppe Bonifazi, et al. (2014). Taking advantage of Hyperspectral Imaging classification of urinary stones against conventional IR Spectroscopy. JBiO - Journal of Biomedical Optics, 19(12), 126004–1 - 126004–9.
Abstract: The analysis of urinary stones is mandatory for the best management of the disease after the stone passage in order to prevent further stone episodes. Thus the use of an appropriate methodology for an individualized stone analysis becomes a key factor for giving the patient the most suitable treatment. A recently developed hyperspectral imaging methodology, based on pixel-to-pixel analysis of near-infrared spectral images, is compared to the reference technique in stone analysis, infrared (IR) spectroscopy. The developed classification model yields >90% correct classification rate when compared to IR and is able to precisely locate stone components within the structure of the stone with a 15 µm resolution. Due to the little sample pretreatment, low analysis time, good performance of the model, and the automation of the measurements, they become analyst independent; this methodology can be considered to become a routine analysis for clinical laboratories.
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