| Records |
| Author |
Pau Riba; Andreas Fischer; Josep Llados; Alicia Fornes |
| Title |
Learning graph edit distance by graph neural networks |
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Journal Article |
| Year |
2021 |
Publication |
Pattern Recognition |
Abbreviated Journal |
PR |
| Volume |
120 |
Issue |
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Pages |
108132 |
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The emergence of geometric deep learning as a novel framework to deal with graph-based representations has faded away traditional approaches in favor of completely new methodologies. In this paper, we propose a new framework able to combine the advances on deep metric learning with traditional approximations of the graph edit distance. Hence, we propose an efficient graph distance based on the novel field of geometric deep learning. Our method employs a message passing neural network to capture the graph structure, and thus, leveraging this information for its use on a distance computation. The performance of the proposed graph distance is validated on two different scenarios. On the one hand, in a graph retrieval of handwritten words i.e. keyword spotting, showing its superior performance when compared with (approximate) graph edit distance benchmarks. On the other hand, demonstrating competitive results for graph similarity learning when compared with the current state-of-the-art on a recent benchmark dataset. |
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DAG; 600.140; 600.121 |
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Admin @ si @ RFL2021 |
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3611 |
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Akhil Gurram; Ahmet Faruk Tuna; Fengyi Shen; Onay Urfalioglu; Antonio Lopez |
| Title |
Monocular Depth Estimation through Virtual-world Supervision and Real-world SfM Self-Supervision |
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Journal Article |
| Year |
2021 |
Publication |
IEEE Transactions on Intelligent Transportation Systems |
Abbreviated Journal |
TITS |
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23 |
Issue |
8 |
Pages |
12738-12751 |
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Depth information is essential for on-board perception in autonomous driving and driver assistance. Monocular depth estimation (MDE) is very appealing since it allows for appearance and depth being on direct pixelwise correspondence without further calibration. Best MDE models are based on Convolutional Neural Networks (CNNs) trained in a supervised manner, i.e., assuming pixelwise ground truth (GT). Usually, this GT is acquired at training time through a calibrated multi-modal suite of sensors. However, also using only a monocular system at training time is cheaper and more scalable. This is possible by relying on structure-from-motion (SfM) principles to generate self-supervision. Nevertheless, problems of camouflaged objects, visibility changes, static-camera intervals, textureless areas, and scale ambiguity, diminish the usefulness of such self-supervision. In this paper, we perform monocular depth estimation by virtual-world supervision (MonoDEVS) and real-world SfM self-supervision. We compensate the SfM self-supervision limitations by leveraging virtual-world images with accurate semantic and depth supervision and addressing the virtual-to-real domain gap. Our MonoDEVSNet outperforms previous MDE CNNs trained on monocular and even stereo sequences. |
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ADAS; 600.118 |
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Admin @ si @ GTS2021 |
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3598 |
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Trevor Canham; Javier Vazquez; Elise Mathieu; Marcelo Bertalmío |
| Title |
Matching visual induction effects on screens of different size |
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Journal Article |
| Year |
2021 |
Publication |
Journal of Vision |
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JOV |
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21 |
Issue |
6(10) |
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1-22 |
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In the film industry, the same movie is expected to be watched on displays of vastly different sizes, from cinema screens to mobile phones. But visual induction, the perceptual phenomenon by which the appearance of a scene region is affected by its surroundings, will be different for the same image shown on two displays of different dimensions. This phenomenon presents a practical challenge for the preservation of the artistic intentions of filmmakers, because it can lead to shifts in image appearance between viewing destinations. In this work, we show that a neural field model based on the efficient representation principle is able to predict induction effects and how, by regularizing its associated energy functional, the model is still able to represent induction but is now invertible. From this finding, we propose a method to preprocess an image in a screen–size dependent way so that its perception, in terms of visual induction, may remain constant across displays of different size. The potential of the method is demonstrated through psychophysical experiments on synthetic images and qualitative examples on natural images. |
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CIC |
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no |
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Admin @ si @ CVM2021 |
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3595 |
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Marta Ligero; Alonso Garcia Ruiz; Cristina Viaplana; Guillermo Villacampa; Maria V Raciti; Jaid Landa; Ignacio Matos; Juan Martin Liberal; Maria Ochoa de Olza; Cinta Hierro; Joaquin Mateo; Macarena Gonzalez; Rafael Morales Barrera; Cristina Suarez; Jordi Rodon; Elena Elez; Irene Braña; Eva Muñoz-Couselo; Ana Oaknin; Roberta Fasani; Paolo Nuciforo; Debora Gil; Carlota Rubio Perez; Joan Seoane; Enriqueta Felip; Manuel Escobar; Josep Tabernero; Joan Carles; Rodrigo Dienstmann; Elena Garralda; Raquel Perez Lopez |
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A CT-based radiomics signature is associated with response to immune checkpoint inhibitors in advanced solid tumors |
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Journal Article |
| Year |
2021 |
Publication |
Radiology |
Abbreviated Journal |
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| Volume |
299 |
Issue |
1 |
Pages |
109-119 |
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Background Reliable predictive imaging markers of response to immune checkpoint inhibitors are needed. Purpose To develop and validate a pretreatment CT-based radiomics signature to predict response to immune checkpoint inhibitors in advanced solid tumors. Materials and Methods In this retrospective study, a radiomics signature was developed in patients with advanced solid tumors (including breast, cervix, gastrointestinal) treated with anti-programmed cell death-1 or programmed cell death ligand-1 monotherapy from August 2012 to May 2018 (cohort 1). This was tested in patients with bladder and lung cancer (cohorts 2 and 3). Radiomics variables were extracted from all metastases delineated at pretreatment CT and selected by using an elastic-net model. A regression model combined radiomics and clinical variables with response as the end point. Biologic validation of the radiomics score with RNA profiling of cytotoxic cells (cohort 4) was assessed with Mann-Whitney analysis. Results The radiomics signature was developed in 85 patients (cohort 1: mean age, 58 years ± 13 [standard deviation]; 43 men) and tested on 46 patients (cohort 2: mean age, 70 years ± 12; 37 men) and 47 patients (cohort 3: mean age, 64 years ± 11; 40 men). Biologic validation was performed in a further cohort of 20 patients (cohort 4: mean age, 60 years ± 13; 14 men). The radiomics signature was associated with clinical response to immune checkpoint inhibitors (area under the curve [AUC], 0.70; 95% CI: 0.64, 0.77; P < .001). In cohorts 2 and 3, the AUC was 0.67 (95% CI: 0.58, 0.76) and 0.67 (95% CI: 0.56, 0.77; P < .001), respectively. A radiomics-clinical signature (including baseline albumin level and lymphocyte count) improved on radiomics-only performance (AUC, 0.74 [95% CI: 0.63, 0.84; P < .001]; Akaike information criterion, 107.00 and 109.90, respectively). Conclusion A pretreatment CT-based radiomics signature is associated with response to immune checkpoint inhibitors, likely reflecting the tumor immunophenotype. © RSNA, 2021 Online supplemental material is available for this article. See also the editorial by Summers in this issue. |
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IAM; 600.145 |
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no |
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Admin @ si @ LGV2021 |
Serial |
3593 |
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Mireia Sole; Joan Blanco; Debora Gil; Oliver Valero; Alvaro Pascual; B. Cardenas; G. Fonseka; E. Anton; Richard Frodsham; Francesca Vidal; Zaida Sarrate |
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Chromosomal positioning in spermatogenic cells is influenced by chromosomal factors associated with gene activity, bouquet formation, and meiotic sex-chromosome inactivation |
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Journal Article |
| Year |
2021 |
Publication |
Chromosoma |
Abbreviated Journal |
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130 |
Issue |
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163-175 |
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Chromosome territoriality is not random along the cell cycle and it is mainly governed by intrinsic chromosome factors and gene expression patterns. Conversely, very few studies have explored the factors that determine chromosome territoriality and its influencing factors during meiosis. In this study, we analysed chromosome positioning in murine spermatogenic cells using three-dimensionally fluorescence in situ hybridization-based methodology, which allows the analysis of the entire karyotype. The main objective of the study was to decipher chromosome positioning in a radial axis (all analysed germ-cell nuclei) and longitudinal axis (only spermatozoa) and to identify the chromosomal factors that regulate such an arrangement. Results demonstrated that the radial positioning of chromosomes during spermatogenesis was cell-type specific and influenced by chromosomal factors associated to gene activity. Chromosomes with specific features that enhance transcription (high GC content, high gene density and high numbers of predicted expressed genes) were preferentially observed in the inner part of the nucleus in virtually all cell types. Moreover, the position of the sex chromosomes was influenced by their transcriptional status, from the periphery of the nucleus when its activity was repressed (pachytene) to a more internal position when it is partially activated (spermatid). At pachytene, chromosome positioning was also influenced by chromosome size due to the bouquet formation. Longitudinal chromosome positioning in the sperm nucleus was not random either, suggesting the importance of ordered longitudinal positioning for the release and activation of the paternal genome after fertilisation. |
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IAM; 600.145 |
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no |
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Admin @ si @ SBG2021 |
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3592 |
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Sonia Baeza; R.Domingo; M.Salcedo; G.Moragas; J.Deportos; I.Garcia Olive; Carles Sanchez; Debora Gil; Antoni Rosell |
| Title |
Artificial Intelligence to Optimize Pulmonary Embolism Diagnosis During Covid-19 Pandemic by Perfusion SPECT/CT, a Pilot Study |
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Journal Article |
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2021 |
Publication |
American Journal of Respiratory and Critical Care Medicine |
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IAM; 600.145 |
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no |
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Admin @ si @ BDS2021 |
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3591 |
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Guillermo Torres; Debora Gil |
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A multi-shape loss function with adaptive class balancing for the segmentation of lung structures |
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Journal Article |
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2020 |
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International Journal of Computer Assisted Radiology and Surgery |
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IJCAR |
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15 |
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1 |
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S154-55 |
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IAM |
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no |
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Admin @ si @ ToG2020 |
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3590 |
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Zhengying Liu; Adrien Pavao; Zhen Xu; Sergio Escalera; Fabio Ferreira; Isabelle Guyon; Sirui Hong; Frank Hutter; Rongrong Ji; Julio C. S. Jacques Junior; Ge Li; Marius Lindauer; Zhipeng Luo; Meysam Madadi; Thomas Nierhoff; Kangning Niu; Chunguang Pan; Danny Stoll; Sebastien Treguer; Jin Wang; Peng Wang; Chenglin Wu; Youcheng Xiong; Arber Zela; Yang Zhang |
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Winning Solutions and Post-Challenge Analyses of the ChaLearn AutoDL Challenge 2019 |
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Journal Article |
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2021 |
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IEEE Transactions on Pattern Analysis and Machine Intelligence |
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TPAMI |
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43 |
Issue |
9 |
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3108 - 3125 |
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This paper reports the results and post-challenge analyses of ChaLearn's AutoDL challenge series, which helped sorting out a profusion of AutoML solutions for Deep Learning (DL) that had been introduced in a variety of settings, but lacked fair comparisons. All input data modalities (time series, images, videos, text, tabular) were formatted as tensors and all tasks were multi-label classification problems. Code submissions were executed on hidden tasks, with limited time and computational resources, pushing solutions that get results quickly. In this setting, DL methods dominated, though popular Neural Architecture Search (NAS) was impractical. Solutions relied on fine-tuned pre-trained networks, with architectures matching data modality. Post-challenge tests did not reveal improvements beyond the imposed time limit. While no component is particularly original or novel, a high level modular organization emerged featuring a “meta-learner”, “data ingestor”, “model selector”, “model/learner”, and “evaluator”. This modularity enabled ablation studies, which revealed the importance of (off-platform) meta-learning, ensembling, and efficient data management. Experiments on heterogeneous module combinations further confirm the (local) optimality of the winning solutions. Our challenge legacy includes an ever-lasting benchmark (http://autodl.chalearn.org), the open-sourced code of the winners, and a free “AutoDL self-service.” |
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HUPBA; no proj |
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no |
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Admin @ si @ LPX2021 |
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3587 |
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Hannes Mueller; Andre Groeger; Jonathan Hersh; Andrea Matranga; Joan Serrat |
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Monitoring war destruction from space using machine learning |
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Journal Article |
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2021 |
Publication |
Proceedings of the National Academy of Sciences of the United States of America |
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PNAS |
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118 |
Issue |
23 |
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e2025400118 |
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Existing data on building destruction in conflict zones rely on eyewitness reports or manual detection, which makes it generally scarce, incomplete, and potentially biased. This lack of reliable data imposes severe limitations for media reporting, humanitarian relief efforts, human-rights monitoring, reconstruction initiatives, and academic studies of violent conflict. This article introduces an automated method of measuring destruction in high-resolution satellite images using deep-learning techniques combined with label augmentation and spatial and temporal smoothing, which exploit the underlying spatial and temporal structure of destruction. As a proof of concept, we apply this method to the Syrian civil war and reconstruct the evolution of damage in major cities across the country. Our approach allows generating destruction data with unprecedented scope, resolution, and frequency—and makes use of the ever-higher frequency at which satellite imagery becomes available. |
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ADAS; 600.118 |
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Admin @ si @ MGH2021 |
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3584 |
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Jorge Charco; Angel Sappa; Boris X. Vintimilla; Henry Velesaca |
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Camera pose estimation in multi-view environments: From virtual scenarios to the real world |
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Journal Article |
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2021 |
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Image and Vision Computing |
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IVC |
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110 |
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104182 |
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This paper presents a domain adaptation strategy to efficiently train network architectures for estimating the relative camera pose in multi-view scenarios. The network architectures are fed by a pair of simultaneously acquired images, hence in order to improve the accuracy of the solutions, and due to the lack of large datasets with pairs of overlapped images, a domain adaptation strategy is proposed. The domain adaptation strategy consists on transferring the knowledge learned from synthetic images to real-world scenarios. For this, the networks are firstly trained using pairs of synthetic images, which are captured at the same time by a pair of cameras in a virtual environment; and then, the learned weights of the networks are transferred to the real-world case, where the networks are retrained with a few real images. Different virtual 3D scenarios are generated to evaluate the relationship between the accuracy on the result and the similarity between virtual and real scenarios—similarity on both geometry of the objects contained in the scene as well as relative pose between camera and objects in the scene. Experimental results and comparisons are provided showing that the accuracy of all the evaluated networks for estimating the camera pose improves when the proposed domain adaptation strategy is used, highlighting the importance on the similarity between virtual-real scenarios. |
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MSIAU; 600.130; 600.122 |
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Admin @ si @ CSV2021 |
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3577 |
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Henry Velesaca; Patricia Suarez; Raul Mira; Angel Sappa |
| Title |
Computer Vision based Food Grain Classification: a Comprehensive Survey |
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Journal Article |
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2021 |
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Computers and Electronics in Agriculture |
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CEA |
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187 |
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106287 |
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This manuscript presents a comprehensive survey on recent computer vision based food grain classification techniques. It includes state-of-the-art approaches intended for different grain varieties. The approaches proposed in the literature are analyzed according to the processing stages considered in the classification pipeline, making it easier to identify common techniques and comparisons. Additionally, the type of images considered by each approach (i.e., images from the: visible, infrared, multispectral, hyperspectral bands) together with the strategy used to generate ground truth data (i.e., real and synthetic images) are reviewed. Finally, conclusions highlighting future needs and challenges are presented. |
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MSIAU; 600.130; 600.122 |
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Admin @ si @ VSM2021 |
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3576 |
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Kai Wang; Joost Van de Weijer; Luis Herranz |
| Title |
ACAE-REMIND for online continual learning with compressed feature replay |
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Journal Article |
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2021 |
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Pattern Recognition Letters |
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PRL |
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150 |
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122-129 |
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online continual learning; autoencoders; vector quantization |
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Online continual learning aims to learn from a non-IID stream of data from a number of different tasks, where the learner is only allowed to consider data once. Methods are typically allowed to use a limited buffer to store some of the images in the stream. Recently, it was found that feature replay, where an intermediate layer representation of the image is stored (or generated) leads to superior results than image replay, while requiring less memory. Quantized exemplars can further reduce the memory usage. However, a drawback of these methods is that they use a fixed (or very intransigent) backbone network. This significantly limits the learning of representations that can discriminate between all tasks. To address this problem, we propose an auxiliary classifier auto-encoder (ACAE) module for feature replay at intermediate layers with high compression rates. The reduced memory footprint per image allows us to save more exemplars for replay. In our experiments, we conduct task-agnostic evaluation under online continual learning setting and get state-of-the-art performance on ImageNet-Subset, CIFAR100 and CIFAR10 dataset. |
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LAMP; 600.147; 601.379; 600.120; 600.141 |
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Admin @ si @ WWH2021 |
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3575 |
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Sanket Biswas; Pau Riba; Josep Llados; Umapada Pal |
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Beyond Document Object Detection: Instance-Level Segmentation of Complex Layouts |
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Journal Article |
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2021 |
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International Journal on Document Analysis and Recognition |
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IJDAR |
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24 |
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269–281 |
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Information extraction is a fundamental task of many business intelligence services that entail massive document processing. Understanding a document page structure in terms of its layout provides contextual support which is helpful in the semantic interpretation of the document terms. In this paper, inspired by the progress of deep learning methodologies applied to the task of object recognition, we transfer these models to the specific case of document object detection, reformulating the traditional problem of document layout analysis. Moreover, we importantly contribute to prior arts by defining the task of instance segmentation on the document image domain. An instance segmentation paradigm is especially important in complex layouts whose contents should interact for the proper rendering of the page, i.e., the proper text wrapping around an image. Finally, we provide an extensive evaluation, both qualitative and quantitative, that demonstrates the superior performance of the proposed methodology over the current state of the art. |
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DAG; 600.121; 600.140; 110.312 |
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Admin @ si @ BRL2021b |
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3574 |
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Domicele Jonauskaite; Lucia Camenzind; C. Alejandro Parraga; Cecile N Diouf; Mathieu Mercapide Ducommun; Lauriane Müller; Melanie Norberg; Christine Mohr |
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Colour-emotion associations in individuals with red-green colour blindness |
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Journal Article |
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2021 |
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PeerJ |
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9 |
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e11180 |
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Affect; Chromotherapy; Colour cognition; Colour vision deficiency; Cross-modal correspondences; Daltonism; Deuteranopia; Dichromatic; Emotion; Protanopia. |
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Colours and emotions are associated in languages and traditions. Some of us may convey sadness by saying feeling blue or by wearing black clothes at funerals. The first example is a conceptual experience of colour and the second example is an immediate perceptual experience of colour. To investigate whether one or the other type of experience more strongly drives colour-emotion associations, we tested 64 congenitally red-green colour-blind men and 66 non-colour-blind men. All participants associated 12 colours, presented as terms or patches, with 20 emotion concepts, and rated intensities of the associated emotions. We found that colour-blind and non-colour-blind men associated similar emotions with colours, irrespective of whether colours were conveyed via terms (r = .82) or patches (r = .80). The colour-emotion associations and the emotion intensities were not modulated by participants' severity of colour blindness. Hinting at some additional, although minor, role of actual colour perception, the consistencies in associations for colour terms and patches were higher in non-colour-blind than colour-blind men. Together, these results suggest that colour-emotion associations in adults do not require immediate perceptual colour experiences, as conceptual experiences are sufficient. |
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CIC; LAMP; 600.120; 600.128 |
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Admin @ si @ JCP2021 |
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3564 |
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Shiqi Yang; Kai Wang; Luis Herranz; Joost Van de Weijer |
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On Implicit Attribute Localization for Generalized Zero-Shot Learning |
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2021 |
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IEEE Signal Processing Letters |
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28 |
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872 - 876 |
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Zero-shot learning (ZSL) aims to discriminate images from unseen classes by exploiting relations to seen classes via their attribute-based descriptions. Since attributes are often related to specific parts of objects, many recent works focus on discovering discriminative regions. However, these methods usually require additional complex part detection modules or attention mechanisms. In this paper, 1) we show that common ZSL backbones (without explicit attention nor part detection) can implicitly localize attributes, yet this property is not exploited. 2) Exploiting it, we then propose SELAR, a simple method that further encourages attribute localization, surprisingly achieving very competitive generalized ZSL (GZSL) performance when compared with more complex state-of-the-art methods. Our findings provide useful insight for designing future GZSL methods, and SELAR provides an easy to implement yet strong baseline. |
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LAMP; 600.120 |
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YWH2021 |
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3563 |
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