C. Alejandro Parraga. (2014). Color Vision, Computational Methods for. In Dieter Jaeger, & Ranu Jung (Eds.), Encyclopedia of Computational Neuroscience (pp. 1–11). Springer-Verlag Berlin Heidelberg.
Abstract: The study of color vision has been aided by a whole battery of computational methods that attempt to describe the mechanisms that lead to our perception of colors in terms of the information-processing properties of the visual system. Their scope is highly interdisciplinary, linking apparently dissimilar disciplines such as mathematics, physics, computer science, neuroscience, cognitive science, and psychology. Since the sensation of color is a feature of our brains, computational approaches usually include biological features of neural systems in their descriptions, from retinal light-receptor interaction to subcortical color opponency, cortical signal decoding, and color categorization. They produce hypotheses that are usually tested by behavioral or psychophysical experiments.
Keywords: Color computational vision; Computational neuroscience of color
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Miguel Angel Bautista, Oriol Pujol, Xavier Baro, & Sergio Escalera. (2011). Introducing the Separability Matrix for Error Correcting Output Codes Coding. In Carlo Sansone, Josef Kittler, & Fabio Roli (Eds.), 10th International Conference on Multiple Classifier Systems (Vol. 6713, pp. 227–236). LNCS. Springer-Verlag Berlin, Heidelberg.
Abstract: Error Correcting Output Codes (ECOC) have demonstrate to be a powerful tool for treating multi-class problems. Nevertheless, predefined ECOC designs may not benefit from Error-correcting principles for particular multi-class data. In this paper, we introduce the Separability matrix as a tool to study and enhance designs for ECOC coding. In addition, a novel problem-dependent coding design based on the Separability matrix is tested over a wide set of challenging multi-class problems, obtaining very satisfactory results.
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Marina Alberti, Simone Balocco, Xavier Carrillo, J. Mauri, & Petia Radeva. (2012). Automatic Non-Rigid Temporal Alignment of IVUS Sequences. In 15th International Conference on Medical Image Computing and Computer Assisted Intervention (Vol. 1, pp. 642–650). Springer-Verlag Berlin, Heidelberg.
Abstract: Clinical studies on atherosclerosis regression/progression performed by Intravascular Ultrasound analysis require the alignment of pullbacks of the same patient before and after clinical interventions. In this paper, a methodology for the automatic alignment of IVUS sequences based on the Dynamic Time Warping technique is proposed. The method is adapted to the specific IVUS alignment task by applying the non-rigid alignment technique to multidimensional morphological signals, and by introducing a sliding window approach together with a regularization term. To show the effectiveness of our method, an extensive validation is performed both on synthetic data and in-vivo IVUS sequences. The proposed method is robust to stent deployment and post dilation surgery and reaches an alignment error of approximately 0.7 mm for in-vivo data, which is comparable to the inter-observer variability.
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Jose Antonio Rodriguez, Gemma Sanchez, & Josep Llados. (2008). Categorization of Digital Ink Elements using Spectral Features. In J.M. Ogier J. L. W. Liu (Ed.), Graphics Recognition: Recent Advances and New Opportunities (Vol. 5046, 188–198). LNCS. Springer–Verlag.
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Hamdi Dibeklioglu, M.O. Hortas, I. Kosunen, P. Zuzánek, Albert Ali Salah, & Theo Gevers. (2011). Design and implementation of an affect-responsive interactive photo frame. JMUI - Journal on Multimodal User Interfaces, 81–95.
Abstract: This paper describes an affect-responsive interactive photo-frame application that offers its user a different experience with every use. It relies on visual analysis of activity levels and facial expressions of its users to select responses from a database of short video segments. This ever-growing database is automatically prepared by an offline analysis of user-uploaded videos. The resulting system matches its user’s affect along dimensions of valence and arousal, and gradually adapts its response to each specific user. In an extended mode, two such systems are coupled and feed each other with visual content. The strengths and weaknesses of the system are assessed through a usability study, where a Wizard-of-Oz response logic is contrasted with the fully automatic system that uses affective and activity-based features, either alone, or in tandem.
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Debora Gil, Oriol Rodriguez-Leor, Petia Radeva, & Aura Hernandez-Sabate. (2007). Assessing Artery Motion Compensation in IVUS. In Computer Analysis Of Images And Patterns (Vol. 4673, pp. 213–220). Lecture Notes in Computer Science. Heidelberg: Springerlink.
Abstract: Cardiac dynamics suppression is a main issue for visual improvement and computation of tissue mechanical properties in IntraVascular UltraSound (IVUS). Although in recent times several motion compensation techniques have arisen, there is a lack of objective evaluation of motion reduction in in vivo pullbacks. We consider that the assessment protocol deserves special attention for the sake of a clinical applicability as reliable as possible. Our work focuses on defining a quality measure and a validation protocol assessing IVUS motion compensation. On the grounds of continuum mechanics laws we introduce a novel score measuring motion reduction in in vivo sequences. Synthetic experiments validate the proposed score as measure of motion parameters accuracy; while results in in vivo pullbacks show its reliability in clinical cases.
Keywords: validation standards; quality measures; IVUS motion compensation; conservation laws; Fourier development
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Jean-Pascal Jacob, Mariella Dimiccoli, & L. Moisan. (2017). Active skeleton for bacteria modelling. CMBBE - Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization, 5(4), 274–286.
Abstract: The investigation of spatio-temporal dynamics of bacterial cells and their molecular components requires automated image analysis tools to track cell shape properties and molecular component locations inside the cells. In the study of bacteria aging, the molecular components of interest are protein aggregates accumulated near bacteria boundaries. This particular location makes very ambiguous the correspondence between aggregates and cells, since computing accurately bacteria boundaries in phase-contrast time-lapse imaging is a challenging task. This paper proposes an active skeleton formulation for bacteria modelling which provides several advantages: an easy computation of shape properties (perimeter, length, thickness and orientation), an improved boundary accuracy in noisy images and a natural bacteria-centred coordinate system that permits the intrinsic location of molecular components inside the cell. Starting from an initial skeleton estimate, the medial axis of the bacterium is obtained by minimising an energy function which incorporates bacteria shape constraints. Experimental results on biological images and comparative evaluation of the performances validate the proposed approach for modelling cigar-shaped bacteria like Escherichia coli. The Image-J plugin of the proposed method can be found online at http://fluobactracker.inrialpes.fr.
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Antonio Lopez, Joan Serrat, Cristina Cañero, Felipe Lumbreras, & T. Graf. (2010). Robust lane markings detection and road geometry computation. IJAT - International Journal of Automotive Technology, 11(3), 395–407.
Abstract: Detection of lane markings based on a camera sensor can be a low-cost solution to lane departure and curve-over-speed warnings. A number of methods and implementations have been reported in the literature. However, reliable detection is still an issue because of cast shadows, worn and occluded markings, variable ambient lighting conditions, for example. We focus on increasing detection reliability in two ways. First, we employed an image feature other than the commonly used edges: ridges, which we claim addresses this problem better. Second, we adapted RANSAC, a generic robust estimation method, to fit a parametric model of a pair of lane lines to the image features, based on both ridgeness and ridge orientation. In addition, the model was fitted for the left and right lane lines simultaneously to enforce a consistent result. Four measures of interest for driver assistance applications were directly computed from the fitted parametric model at each frame: lane width, lane curvature, and vehicle yaw angle and lateral offset with regard the lane medial axis. We qualitatively assessed our method in video sequences captured on several road types and under very different lighting conditions. We also quantitatively assessed it on synthetic but realistic video sequences for which road geometry and vehicle trajectory ground truth are known.
Keywords: lane markings
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Theo Gevers, Arjan Gijsenij, Joost Van de Weijer, & J.M. Geusebroek. (2012). Color in Computer Vision: Fundamentals and Applications. The Wiley-IS&T Series in Imaging Science and Technology.
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Debora Gil, Jordi Gonzalez, & Gemma Sanchez (Eds.). (2007). Computer Vision: Advances in Research and Development. 2. Bellaterra (Spain): UAB.
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Enric Marti, Debora Gil, & Carme Julia. (2008). Experiencia d aplicació de la metodología d aprenentatge per proyectes en assignatures d Enginyeria Informàtica per a una millor adaptació als crèdits ECTS i EEES (IDES-UAB, & E. A. M.Enric Martinez, Eds.) (Vol. 1). UAB.
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Eric Amiel. (2005). Visualisation de vaisseaux sanguins (Enric Marti, Ed.). Bachelor's thesis, Université Paul Sabatier Toulouse III, Toulouse.
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Jaime Lopez-Krahe, Josep Llados, & Enric Marti. (2000). Architectural Floor Plan Analysis (Robert B. Fisher, Ed.). University of Edinburgh.
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Petia Radeva, Jordi Vitria, Fernando Vilariño, Panagiota Spyridonos, Fernando Azpiroz, Juan Malagelada, et al. (2009). Cascade analysis for intestinal contraction detection. US Patent Office.
Abstract: A method and system cascade analysisi for intestinal contraction detection is provided by extracting from image frames captured in-vivo. The method and system also relate to the detection of turbid liquids in intestinal tracts, to automatic detection of video image frames taken in the gastrointestinal tract including a field of view obstructed by turbid media, and more particulary, to extraction of image data obstructed by turbid media.
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Carolina Malagelada, F.De Lorio, Santiago Segui, S. Mendez, Michal Drozdzal, Jordi Vitria, et al. (2012). Functional gut disorders or disordered gut function? Small bowel dysmotility evidenced by an original technique. NEUMOT - Neurogastroenterology & Motility, 24(3), 223–230.
Abstract: JCR Impact Factor 2010: 3.349
Background This study aimed to determine the proportion of cases with abnormal intestinal motility among patients with functional bowel disorders. To this end, we applied an original method, previously developed in our laboratory, for analysis of endoluminal images obtained by capsule endoscopy. This novel technology is based on computer vision and machine learning techniques.
Methods The endoscopic capsule (Pillcam SB1; Given Imaging, Yokneam, Israel) was administered to 80 patients with functional bowel disorders and 70 healthy subjects. Endoluminal image analysis was performed with a computer vision program developed for the evaluation of contractile events (luminal occlusions and radial wrinkles), non-contractile patterns (open tunnel and smooth wall patterns), type of content (secretions, chyme) and motion of wall and contents. Normality range and discrimination of abnormal cases were established by a machine learning technique. Specifically, an iterative classifier (one-class support vector machine) was applied in a random population of 50 healthy subjects as a training set and the remaining subjects (20 healthy subjects and 80 patients) as a test set.
Key Results The classifier identified as abnormal 29% of patients with functional diseases of the bowel (23 of 80), and as normal 97% of healthy subjects (68 of 70) (P < 0.05 by chi-squared test). Patients identified as abnormal clustered in two groups, which exhibited either a hyper- or a hypodynamic motility pattern. The motor behavior was unrelated to clinical features.
Conclusions & Inferences With appropriate methodology, abnormal intestinal motility can be demonstrated in a significant proportion of patients with functional bowel disorders, implying a pathologic disturbance of gut physiology.
Keywords: capsule endoscopy;computer vision analysis;machine learning technique;small bowel motility
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