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Angel Sappa, Niki Aifanti, Sotiris Malassiotis, & N. Grammalidis. (2005). Survey of 3D Human Body Representations. In Encyclopedia of Information Science and Technology, 1(5):2696–2701.
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Gloria Fernandez Esparrach, Jorge Bernal, Maria Lopez Ceron, Henry Cordova, Cristina Sanchez Montes, Cristina Rodriguez de Miguel, et al. (2016). Exploring the clinical potential of an automatic colonic polyp detection method based on the creation of energy maps. END - Endoscopy, 48(9), 837–842.
Abstract: Background and aims: Polyp miss-rate is a drawback of colonoscopy that increases significantly in small polyps. We explored the efficacy of an automatic computer vision method for polyp detection.
Methods: Our method relies on a model that defines polyp boundaries as valleys of image intensity. Valley information is integrated into energy maps which represent the likelihood of polyp presence.
Results: In 24 videos containing polyps from routine colonoscopies, all polyps were detected in at least one frame. Mean values of the maximum of energy map were higher in frames with polyps than without (p<0.001). Performance improved in high quality frames (AUC= 0.79, 95%CI: 0.70-0.87 vs 0.75, 95%CI: 0.66-0.83). Using 3.75 as maximum threshold value, sensitivity and specificity for detection of polyps were 70.4% (95%CI: 60.3-80.8) and 72.4% (95%CI: 61.6-84.6), respectively.
Conclusion: Energy maps showed a good performance for colonic polyp detection. This indicates a potential applicability in clinical practice.
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Cristina Sanchez Montes, F. Javier Sanchez, Jorge Bernal, Henry Cordova, Maria Lopez Ceron, Miriam Cuatrecasas, et al. (2019). Computer-aided Prediction of Polyp Histology on White-Light Colonoscopy using Surface Pattern Analysis. END - Endoscopy, 51(3), 261–265.
Abstract: Background and study aims: To evaluate a new computational histology prediction system based on colorectal polyp textural surface patterns using high definition white light images.
Patients and methods: Textural elements (textons) were characterized according to their contrast with respect to the surface, shape and number of bifurcations, assuming that dysplastic polyps are associated with highly contrasted, large tubular patterns with some degree of bifurcation. Computer-aided diagnosis (CAD) was compared with pathological diagnosis and the diagnosis by the endoscopists using Kudo and NICE classification.
Results: Images of 225 polyps were evaluated (142 dysplastic and 83 non-dysplastic). CAD system correctly classified 205 (91.1%) polyps, 131/142 (92.3%) dysplastic and 74/83 (89.2%) non-dysplastic. For the subgroup of 100 diminutive (<5 mm) polyps, CAD correctly classified 87 (87%) polyps, 43/50 (86%) dysplastic and 44/50 (88%) non-dysplastic. There were not statistically significant differences in polyp histology prediction based on CAD system and on endoscopist assessment.
Conclusion: A computer vision system based on the characterization of the polyp surface in the white light accurately predicts colorectal polyp histology.
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Ana Garcia Rodriguez, Yael Tudela, Henry Cordova, S. Carballal, I. Ordas, L. Moreira, et al. (2022). First in Vivo Computer-Aided Diagnosis of Colorectal Polyps using White Light Endoscopy. END - Endoscopy, 54.
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O.F.Ahmad, Y.Mori, M.Misawa, S.Kudo, J.T.Anderson, & Jorge Bernal. (2021). Establishing key research questions for the implementation of artificial intelligence in colonoscopy: a modified Delphi method. END - Endoscopy, 53(9), 893–901.
Abstract: BACKGROUND : Artificial intelligence (AI) research in colonoscopy is progressing rapidly but widespread clinical implementation is not yet a reality. We aimed to identify the top implementation research priorities. METHODS : An established modified Delphi approach for research priority setting was used. Fifteen international experts, including endoscopists and translational computer scientists/engineers, from nine countries participated in an online survey over 9 months. Questions related to AI implementation in colonoscopy were generated as a long-list in the first round, and then scored in two subsequent rounds to identify the top 10 research questions. RESULTS : The top 10 ranked questions were categorized into five themes. Theme 1: clinical trial design/end points (4 questions), related to optimum trial designs for polyp detection and characterization, determining the optimal end points for evaluation of AI, and demonstrating impact on interval cancer rates. Theme 2: technological developments (3 questions), including improving detection of more challenging and advanced lesions, reduction of false-positive rates, and minimizing latency. Theme 3: clinical adoption/integration (1 question), concerning the effective combination of detection and characterization into one workflow. Theme 4: data access/annotation (1 question), concerning more efficient or automated data annotation methods to reduce the burden on human experts. Theme 5: regulatory approval (1 question), related to making regulatory approval processes more efficient. CONCLUSIONS : This is the first reported international research priority setting exercise for AI in colonoscopy. The study findings should be used as a framework to guide future research with key stakeholders to accelerate the clinical implementation of AI in endoscopy.
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Ana Garcia Rodriguez, Yael Tudela, Henry Cordova, S. Carballal, I. Ordas, L. Moreira, et al. (2022). In vivo computer-aided diagnosis of colorectal polyps using white light endoscopy. ENDIO - Endoscopy International Open, 10(9), E1201–E1207.
Abstract: Background and study aims Artificial intelligence is currently able to accurately predict the histology of colorectal polyps. However, systems developed to date use complex optical technologies and have not been tested in vivo. The objective of this study was to evaluate the efficacy of a new deep learning-based optical diagnosis system, ATENEA, in a real clinical setting using only high-definition white light endoscopy (WLE) and to compare its performance with endoscopists. Methods ATENEA was prospectively tested in real life on consecutive polyps detected in colorectal cancer screening colonoscopies at Hospital Clínic. No images were discarded, and only WLE was used. The in vivo ATENEA's prediction (adenoma vs non-adenoma) was compared with the prediction of four staff endoscopists without specific training in optical diagnosis for the study purposes. Endoscopists were blind to the ATENEA output. Histology was the gold standard. Results Ninety polyps (median size: 5 mm, range: 2-25) from 31 patients were included of which 69 (76.7 %) were adenomas. ATENEA correctly predicted the histology in 63 of 69 (91.3 %, 95 % CI: 82 %-97 %) adenomas and 12 of 21 (57.1 %, 95 % CI: 34 %-78 %) non-adenomas while endoscopists made correct predictions in 52 of 69 (75.4 %, 95 % CI: 60 %-85 %) and 20 of 21 (95.2 %, 95 % CI: 76 %-100 %), respectively. The global accuracy was 83.3 % (95 % CI: 74%-90 %) and 80 % (95 % CI: 70 %-88 %) for ATENEA and endoscopists, respectively. Conclusion ATENEA can accurately be used for in vivo characterization of colorectal polyps, enabling the endoscopist to make direct decisions. ATENEA showed a global accuracy similar to that of endoscopists despite an unsatisfactory performance for non-adenomatous lesions.
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Debora Gil, & Petia Radeva. (2003). Curvature Vector Flow to Assure Convergent Deformable Models for Shape Modelling. In B. Springer (Ed.), Energy Minimization Methods In Computer Vision And Pattern Recognition (Vol. 2683, pp. 357–372). LNCS. Lisbon, PORTUGAL: Springer, Berlin.
Abstract: Poor convergence to concave shapes is a main limitation of snakes as a standard segmentation and shape modelling technique. The gradient of the external energy of the snake represents a force that pushes the snake into concave regions, as its internal energy increases when new inexion points are created. In spite of the improvement of the external energy by the gradient vector ow technique, highly non convex shapes can not be obtained, yet. In the present paper, we develop a new external energy based on the geometry of the curve to be modelled. By tracking back the deformation of a curve that evolves by minimum curvature ow, we construct a distance map that encapsulates the natural way of adapting to non convex shapes. The gradient of this map, which we call curvature vector ow (CVF), is capable of attracting a snake towards any contour, whatever its geometry. Our experiments show that, any initial snake condition converges to the curve to be modelled in optimal time.
Keywords: Initial condition; Convex shape; Non convex analysis; Increase; Segmentation; Gradient; Standard; Standards; Concave shape; Flow models; Tracking; Edge detection; Curvature
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Fadi Dornaika, Abdelmalik Moujahid, & Bogdan Raducanu. (2013). Facial expression recognition using tracked facial actions: Classifier performance analysis. EAAI - Engineering Applications of Artificial Intelligence, 26(1), 467–477.
Abstract: In this paper, we address the analysis and recognition of facial expressions in continuous videos. More precisely, we study classifiers performance that exploit head pose independent temporal facial action parameters. These are provided by an appearance-based 3D face tracker that simultaneously provides the 3D head pose and facial actions. The use of such tracker makes the recognition pose- and texture-independent. Two different schemes are studied. The first scheme adopts a dynamic time warping technique for recognizing expressions where training data are given by temporal signatures associated with different universal facial expressions. The second scheme models temporal signatures associated with facial actions with fixed length feature vectors (observations), and uses some machine learning algorithms in order to recognize the displayed expression. Experiments quantified the performance of different schemes. These were carried out on CMU video sequences and home-made video sequences. The results show that the use of dimension reduction techniques on the extracted time series can improve the classification performance. Moreover, these experiments show that the best recognition rate can be above 90%.
Keywords: Visual face tracking; 3D deformable models; Facial actions; Dynamic facial expression recognition; Human–computer interaction
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Idoia Ruiz, Bogdan Raducanu, Rakesh Mehta, & Jaume Amores. (2020). Optimizing speed/accuracy trade-off for person re-identification via knowledge distillation. EAAI - Engineering Applications of Artificial Intelligence, 87, 103309.
Abstract: Finding a person across a camera network plays an important role in video surveillance. For a real-world person re-identification application, in order to guarantee an optimal time response, it is crucial to find the balance between accuracy and speed. We analyse this trade-off, comparing a classical method, that comprises hand-crafted feature description and metric learning, in particular, LOMO and XQDA, to deep learning based techniques, using image classification networks, ResNet and MobileNets. Additionally, we propose and analyse network distillation as a learning strategy to reduce the computational cost of the deep learning approach at test time. We evaluate both methods on the Market-1501 and DukeMTMC-reID large-scale datasets, showing that distillation helps reducing the computational cost at inference time while even increasing the accuracy performance.
Keywords: Person re-identification; Network distillation; Image retrieval; Model compression; Surveillance
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Joel Barajas, Karla Lizbeth Caballero, & Petia Radeva. (2007). Cardiac Phase Extraction in IVUS Sequences Using 1-D Gabor Filters. In Engineering in Medicine and Biology Society, 29th Annual International Conference of the IEEE (343–36).
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Karla Lizbeth Caballero, Joel Barajas, & Petia Radeva. (2007). Using Reconstructed IVUS Images for Coronary Plaque Classification. In Engineering in Medicine and Biology Society, 29th Annual International Conference of the IEEE (2167–2170).
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Miguel Angel Bautista, Sergio Escalera, Xavier Baro, Oriol Pujol, Jordi Vitria, & Petia Radeva. (2011). On the Design of Low Redundancy Error-Correcting Output Codes. In Ensembles in Machine Learning Applications (Vol. 373, pp. 21–38). Springer Berlin Heidelberg.
Abstract: The classification of large number of object categories is a challenging trend in the Pattern Recognition field. In the literature, this is often addressed using an ensemble of classifiers . In this scope, the Error-Correcting Output Codes framework has demonstrated to be a powerful tool for combining classifiers. However, most of the state-of-the-art ECOC approaches use a linear or exponential number of classifiers, making the discrimination of a large number of classes unfeasible. In this paper, we explore and propose a compact design of ECOC in terms of the number of classifiers. Evolutionary computation is used for tuning the parameters of the classifiers and looking for the best compact ECOC code configuration. The results over several public UCI data sets and different multi-class Computer Vision problems show that the proposed methodology obtains comparable (even better) results than the state-of-the-art ECOC methodologies with far less number of dichotomizers.
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Razieh Rastgoo, Kourosh Kiani, & Sergio Escalera. (2018). Multi-Modal Deep Hand Sign Language Recognition in Still Images Using Restricted Boltzmann Machine. ENTROPY - Entropy, 20(11), 809.
Abstract: In this paper, a deep learning approach, Restricted Boltzmann Machine (RBM), is used to perform automatic hand sign language recognition from visual data. We evaluate how RBM, as a deep generative model, is capable of generating the distribution of the input data for an enhanced recognition of unseen data. Two modalities, RGB and Depth, are considered in the model input in three forms: original image, cropped image, and noisy cropped image. Five crops of the input image are used and the hand of these cropped images are detected using Convolutional Neural Network (CNN). After that, three types of the detected hand images are generated for each modality and input to RBMs. The outputs of the RBMs for two modalities are fused in another RBM in order to recognize the output sign label of the input image. The proposed multi-modal model is trained on all and part of the American alphabet and digits of four publicly available datasets. We also evaluate the robustness of the proposal against noise. Experimental results show that the proposed multi-modal model, using crops and the RBM fusing methodology, achieves state-of-the-art results on Massey University Gesture Dataset 2012, American Sign Language (ASL). and Fingerspelling Dataset from the University of Surrey’s Center for Vision, Speech and Signal Processing, NYU, and ASL Fingerspelling A datasets.
Keywords: hand sign language; deep learning; restricted Boltzmann machine (RBM); multi-modal; profoundly deaf; noisy image
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Mohammad N. S. Jahromi, Pau Buch Cardona, Egils Avots, Kamal Nasrollahi, Sergio Escalera, Thomas B. Moeslund, et al. (2019). Privacy-Constrained Biometric System for Non-cooperative Users. ENTROPY - Entropy, 21(11), 1033.
Abstract: With the consolidation of the new data protection regulation paradigm for each individual within the European Union (EU), major biometric technologies are now confronted with many concerns related to user privacy in biometric deployments. When individual biometrics are disclosed, the sensitive information about his/her personal data such as financial or health are at high risk of being misused or compromised. This issue can be escalated considerably over scenarios of non-cooperative users, such as elderly people residing in care homes, with their inability to interact conveniently and securely with the biometric system. The primary goal of this study is to design a novel database to investigate the problem of automatic people recognition under privacy constraints. To do so, the collected data-set contains the subject’s hand and foot traits and excludes the face biometrics of individuals in order to protect their privacy. We carried out extensive simulations using different baseline methods, including deep learning. Simulation results show that, with the spatial features extracted from the subject sequence in both individual hand or foot videos, state-of-the-art deep models provide promising recognition performance.
Keywords: biometric recognition; multimodal-based human identification; privacy; deep learning
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Ikechukwu Ofodile, Ahmed Helmi, Albert Clapes, Egils Avots, Kerttu Maria Peensoo, Sandhra Mirella Valdma, et al. (2019). Action recognition using single-pixel time-of-flight detection. ENTROPY - Entropy, 21(4), 414.
Abstract: Action recognition is a challenging task that plays an important role in many robotic systems, which highly depend on visual input feeds. However, due to privacy concerns, it is important to find a method which can recognise actions without using visual feed. In this paper, we propose a concept for detecting actions while preserving the test subject’s privacy. Our proposed method relies only on recording the temporal evolution of light pulses scattered back from the scene.
Such data trace to record one action contains a sequence of one-dimensional arrays of voltage values acquired by a single-pixel detector at 1 GHz repetition rate. Information about both the distance to the object and its shape are embedded in the traces. We apply machine learning in the form of recurrent neural networks for data analysis and demonstrate successful action recognition. The experimental results show that our proposed method could achieve on average 96.47% accuracy on the actions walking forward, walking backwards, sitting down, standing up and waving hand, using recurrent
neural network.
Keywords: single pixel single photon image acquisition; time-of-flight; action recognition
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