Laura Igual, Joan Carles Soliva, Antonio Hernandez, Sergio Escalera, Oscar Vilarroya, & Petia Radeva. (2012). Supervised Brain Segmentation and Classification in Diagnostic of Attention-Deficit/Hyperactivity Disorder. In High Performance Computing and Simulation, International Conference on (pp. 182–187). IEEE Xplore.
Abstract: This paper presents an automatic method for external and internal segmentation of the caudate nucleus in Magnetic Resonance Images (MRI) based on statistical and structural machine learning approaches. This method is applied in Attention-Deficit/Hyperactivity Disorder (ADHD) diagnosis. The external segmentation method adapts the Graph Cut energy-minimization model to make it suitable for segmenting small, low-contrast structures, such as the caudate nucleus. In particular, new energy function data and boundary potentials are defined and a supervised energy term based on contextual brain structures is added. Furthermore, the internal segmentation method learns a classifier based on shape features of the Region of Interest (ROI) in MRI slices. The results show accurate external and internal caudate segmentation in a real data set and similar performance of ADHD diagnostic test to manual annotation.
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Xavier Perez Sala, Laura Igual, Sergio Escalera, & Cecilio Angulo. (2012). Uniform Sampling of Rotations for Discrete and Continuous Learning of 2D Shape Models. In Vision Robotics: Technologies for Machine Learning and Vision Applications (pp. 23–42). IGI-Global.
Abstract: Different methodologies of uniform sampling over the rotation group, SO(3), for building unbiased 2D shape models from 3D objects are introduced and reviewed in this chapter. State-of-the-art non uniform sampling approaches are discussed, and uniform sampling methods using Euler angles and quaternions are introduced. Moreover, since presented work is oriented to model building applications, it is not limited to general discrete methods to obtain uniform 3D rotations, but also from a continuous point of view in the case of Procrustes Analysis.
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Laura Igual, Joan Carles Soliva, Antonio Hernandez, Sergio Escalera, Oscar Vilarroya, & Petia Radeva. (2012). A Supervised Graph-cut Deformable Model for Brain MRI Segmentation. Deformation models: tracking, animation and applications. In Computational Vision and Biomechanics. LNCS. Springer Netherlands.
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Antonio Hernandez, Carlo Gatta, Sergio Escalera, Laura Igual, Victoria Martin-Yuste, Manel Sabate, et al. (2012). Accurate coronary centerline extraction, caliber estimation and catheter detection in angiographies. TITB - IEEE Transactions on Information Technology in Biomedicine, 16(6), 1332–1340.
Abstract: Segmentation of coronary arteries in X-Ray angiography is a fundamental tool to evaluate arterial diseases and choose proper coronary treatment. The accurate segmentation of coronary arteries has become an important topic for the registration of different modalities which allows physicians rapid access to different medical imaging information from Computed Tomography (CT) scans or Magnetic Resonance Imaging (MRI). In this paper, we propose an accurate fully automatic algorithm based on Graph-cuts for vessel centerline extraction, caliber estimation, and catheter detection. Vesselness, geodesic paths, and a new multi-scale edgeness map are combined to customize the Graph-cuts approach to the segmentation of tubular structures, by means of a global optimization of the Graph-cuts energy function. Moreover, a novel supervised learning methodology that integrates local and contextual information is proposed for automatic catheter detection. We evaluate the method performance on three datasets coming from different imaging systems. The method performs as good as the expert observer w.r.t. centerline detection and caliber estimation. Moreover, the method discriminates between arteries and catheter with an accuracy of 96.5%, sensitivity of 72%, and precision of 97.4%.
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Rui Hua, Oriol Pujol, Francesco Ciompi, Marina Alberti, Simone Balocco, J. Mauri, et al. (2012). Stent Strut Detection by Classifying a Wide Set of IVUS Features. In Computed Assisted Stenting Workshop.
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Alicia Fornes, Sergio Escalera, Josep Llados, Gemma Sanchez, Petia Radeva, & Oriol Pujol. (2007). Handwritten Symbol Recognition by a Boosted Blurred Shape Model with Error Correction. In 3rd Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA 2007), J. Marti et al. (Eds.) LNCS 4477:13–21.
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Ricardo Toledo, Ramon Baldrich, Ernest Valveny, & Petia Radeva. (2002). Enhancing snakes for vessel detection in angiography images..
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Robert Benavente, Laura Igual, & Fernando Vilariño. (2008). Current Challenges in Computer Vision.
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Petia Radeva, Joan Serrat, & Enric Marti. (1995). A snake for model-based segmentation. In Proc. Conf. Fifth Int Computer Vision (pp. 816–821).
Abstract: Despite the promising results of numerous applications, the hitherto proposed snake techniques share some common problems: snake attraction by spurious edge points, snake degeneration (shrinking and attening), convergence and stability of the deformation process, snake initialization and local determination of the parameters of elasticity. We argue here that these problems can be solved only when all the snake aspects are considered. The snakes proposed here implement a new potential eld and external force in order to provide a deformation convergence, attraction by both near and far edges as well as snake behaviour selective according to the edge orientation. Furthermore, we conclude that in the case of model-based seg mentation, the internal force should include structural information about the expected snake shape. Experiments using this kind of snakes for segmenting bones in complex hand radiographs show a signi cant improvement.
Keywords: snakes; elastic matching; model-based segmenta tion
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Petia Radeva, Ricardo Toledo, Craig Von Land, & Juan J. Villanueva. (1998). 3D Vessel Reconstruction from Biplane Angiograms using Snakes..
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Petia Radeva, Ricardo Toledo, Craig Von Land, & Juan J. Villanueva. (1998). 3D Dynamic Model of the Coronary Tree..
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Cristina Cañero, Petia Radeva, Ricardo Toledo, Juan J. Villanueva, & J. Mauri. (2000). 3D Curve Reconstruction by Biplane Snakes. In 15 th International Conference on Pattern Recognition (Vol. 4, pp. 563–566).
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J. Mauri, E Fernandez-Nofrerias, E. Esplugas, A. Cequier, David Rotger, Ricardo Toledo, et al. (2000). Ecografia Intracoronaria: Navegacion Informatica por el cubo de datos de las imagenes..
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J. Mauri, E. Esplugas, B. Garcia del Blanco, E Fernandez-Nofrerias, A. Cequier, J.A. Gomez-Hospital, et al. (2000). 3-D Stent and Vessel Reconstruction from IVUS: a Physics-Based Approach.
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Cristina Cañero, Petia Radeva, Oriol Pujol, Ricardo Toledo, Debora Gil, J. Saludes, et al. (1999). Optimal Stent Implantation: Three-dimensional Evaluation of the Mutual Position of Stent and Vessel via Intracoronary Ecography. In Proceedings of International Conference on Computer in Cardiology (CIC´99).
Abstract: We present a new automatic technique to visualize and quantify the mutual position between the stent and the vessel wall by considering their three-dimensional reconstruction. Two deformable generalized cylinders adapt to the image features in all IVUS planes corresponding to the vessel wall and the stent in order to reconstruct the boundaries of the stent and the vessel in space. The image features that characterize the stent and the vessel wall are determined in terms of edge and ridge image detectors taking into account the gray level of the image pixels. We show that the 30 reconstruction by deformable cylinders is accurate and robust due to the spatial data coherence in the considered volumetric IVUS image. The main clinic utility of the stent and vessel reconstruction by deformable’ cylinders consists of its possibility to visualize and to assess the optimal stent introduction.
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