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Laura Igual, Joan Carles Soliva, Antonio Hernandez, Sergio Escalera, Oscar Vilarroya, & Petia Radeva. (2012). A Supervised Graph-cut Deformable Model for Brain MRI Segmentation. Deformation models: tracking, animation and applications. In Computational Vision and Biomechanics. LNCS. Springer Netherlands.
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Antonio Hernandez, Carlo Gatta, Sergio Escalera, Laura Igual, Victoria Martin-Yuste, Manel Sabate, et al. (2012). Accurate coronary centerline extraction, caliber estimation and catheter detection in angiographies. TITB - IEEE Transactions on Information Technology in Biomedicine, 16(6), 1332–1340.
Abstract: Segmentation of coronary arteries in X-Ray angiography is a fundamental tool to evaluate arterial diseases and choose proper coronary treatment. The accurate segmentation of coronary arteries has become an important topic for the registration of different modalities which allows physicians rapid access to different medical imaging information from Computed Tomography (CT) scans or Magnetic Resonance Imaging (MRI). In this paper, we propose an accurate fully automatic algorithm based on Graph-cuts for vessel centerline extraction, caliber estimation, and catheter detection. Vesselness, geodesic paths, and a new multi-scale edgeness map are combined to customize the Graph-cuts approach to the segmentation of tubular structures, by means of a global optimization of the Graph-cuts energy function. Moreover, a novel supervised learning methodology that integrates local and contextual information is proposed for automatic catheter detection. We evaluate the method performance on three datasets coming from different imaging systems. The method performs as good as the expert observer w.r.t. centerline detection and caliber estimation. Moreover, the method discriminates between arteries and catheter with an accuracy of 96.5%, sensitivity of 72%, and precision of 97.4%.
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Rui Hua, Oriol Pujol, Francesco Ciompi, Marina Alberti, Simone Balocco, Josepa Mauri, et al. (2012). Stent Strut Detection by Classifying a Wide Set of IVUS Features. In Computed Assisted Stenting Workshop.
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Michal Drozdzal, Petia Radeva, Santiago Segui, Laura Igual, Carolina Malagelada, Fernando Azpiroz, et al. (2012). System and Method for Improving a Discriminative Model.
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Santiago Segui, Michal Drozdzal, Petia Radeva, & Jordi Vitria. (2012). An Integrated Approach to Contextual Face Detection. In 1st International Conference on Pattern Recognition Applications and Methods (pp. 143–150). Springer.
Abstract: Face detection is, in general, based on content-based detectors. Nevertheless, the face is a non-rigid object with well defined relations with respect to the human body parts. In this paper, we propose to take benefit of the context information in order to improve content-based face detections. We propose a novel framework for integrating multiple content- and context-based detectors in a discriminative way. Moreover, we develop an integrated scoring procedure that measures the ’faceness’ of each hypothesis and is used to discriminate the detection results. Our approach detects a higher rate of faces while minimizing the number of false detections, giving an average increase of more than 10% in average precision when comparing it to state-of-the art face detectors
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Michal Drozdzal, Petia Radeva, Santiago Segui, Laura Igual, Carolina Malagelada, Fernando Azpiroz, et al. (2012). System and method for automatic detection of in vivo contraction video sequences.
Abstract: Publication date: 2012/3/8
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Petia Radeva, Michal Drozdzal, Santiago Segui, Laura Igual, Carolina Malagelada, Fernando Azpiroz, et al. (2012). Active labeling: Application to wireless endoscopy analysis. In High Performance Computing and Simulation, International Conference on (pp. 174–181).
Abstract: Today, robust learners trained in a real supervised machine learning application should count with a rich collection of positive and negative examples. Although in many applications, it is not difficult to obtain huge amount of data, labeling those data can be a very expensive process, especially when dealing with data of high variability and complexity. A good example of such cases are data from medical imaging applications where annotating anomalies like tumors, polyps, atherosclerotic plaque or informative frames in wireless endoscopy need highly trained experts. Building a representative set of training data from medical videos (e.g. Wireless Capsule Endoscopy) means that thousands of frames to be labeled by an expert. It is quite normal that data in new videos come different and thus are not represented by the training set. In this paper, we review the main approaches on active learning and illustrate how active learning can help to reduce expert effort in constructing the training sets. We show that applying active learning criteria, the number of human interventions can be significantly reduced. The proposed system allows the annotation of informative/non-informative frames of Wireless Capsule Endoscopy video containing more than 30000 frames each one with less than 100 expert ”clicks”.
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Sergio Escalera, Xavier Baro, Jordi Vitria, Petia Radeva, & Bogdan Raducanu. (2012). Social Network Extraction and Analysis Based on Multimodal Dyadic Interaction. SENS - Sensors, 12(2), 1702–1719.
Abstract: IF=1.77 (2010)
Social interactions are a very important component in peopleís lives. Social network analysis has become a common technique used to model and quantify the properties of social interactions. In this paper, we propose an integrated framework to explore the characteristics of a social network extracted from multimodal dyadic interactions. For our study, we used a set of videos belonging to New York Timesí Blogging Heads opinion blog.
The Social Network is represented as an oriented graph, whose directed links are determined by the Influence Model. The linksí weights are a measure of the ìinfluenceî a person has over the other. The states of the Influence Model encode automatically extracted audio/visual features from our videos using state-of-the art algorithms. Our results are reported in terms of accuracy of audio/visual data fusion for speaker segmentation and centrality measures used to characterize the extracted social network.
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Miguel Angel Bautista, Antonio Hernandez, Victor Ponce, Xavier Perez Sala, Xavier Baro, Oriol Pujol, et al. (2012). Probability-based Dynamic TimeWarping for Gesture Recognition on RGB-D data. In 21st International Conference on Pattern Recognition International Workshop on Depth Image Analysis (Vol. 7854, pp. 126–135). Springer Berlin Heidelberg.
Abstract: Dynamic Time Warping (DTW) is commonly used in gesture recognition tasks in order to tackle the temporal length variability of gestures. In the DTW framework, a set of gesture patterns are compared one by one to a maybe infinite test sequence, and a query gesture category is recognized if a warping cost below a certain threshold is found within the test sequence. Nevertheless, either taking one single sample per gesture category or a set of isolated samples may not encode the variability of such gesture category. In this paper, a probability-based DTW for gesture recognition is proposed. Different samples of the same gesture pattern obtained from RGB-Depth data are used to build a Gaussian-based probabilistic model of the gesture. Finally, the cost of DTW has been adapted accordingly to the new model. The proposed approach is tested in a challenging scenario, showing better performance of the probability-based DTW in comparison to state-of-the-art approaches for gesture recognition on RGB-D data.
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Carolina Malagelada, F.De Lorio, Santiago Segui, S. Mendez, Michal Drozdzal, Jordi Vitria, et al. (2012). Functional gut disorders or disordered gut function? Small bowel dysmotility evidenced by an original technique. NEUMOT - Neurogastroenterology & Motility, 24(3), 223–230.
Abstract: JCR Impact Factor 2010: 3.349
Background This study aimed to determine the proportion of cases with abnormal intestinal motility among patients with functional bowel disorders. To this end, we applied an original method, previously developed in our laboratory, for analysis of endoluminal images obtained by capsule endoscopy. This novel technology is based on computer vision and machine learning techniques.
Methods The endoscopic capsule (Pillcam SB1; Given Imaging, Yokneam, Israel) was administered to 80 patients with functional bowel disorders and 70 healthy subjects. Endoluminal image analysis was performed with a computer vision program developed for the evaluation of contractile events (luminal occlusions and radial wrinkles), non-contractile patterns (open tunnel and smooth wall patterns), type of content (secretions, chyme) and motion of wall and contents. Normality range and discrimination of abnormal cases were established by a machine learning technique. Specifically, an iterative classifier (one-class support vector machine) was applied in a random population of 50 healthy subjects as a training set and the remaining subjects (20 healthy subjects and 80 patients) as a test set.
Key Results The classifier identified as abnormal 29% of patients with functional diseases of the bowel (23 of 80), and as normal 97% of healthy subjects (68 of 70) (P < 0.05 by chi-squared test). Patients identified as abnormal clustered in two groups, which exhibited either a hyper- or a hypodynamic motility pattern. The motor behavior was unrelated to clinical features.
Conclusions & Inferences With appropriate methodology, abnormal intestinal motility can be demonstrated in a significant proportion of patients with functional bowel disorders, implying a pathologic disturbance of gut physiology.
Keywords: capsule endoscopy;computer vision analysis;machine learning technique;small bowel motility
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Santiago Segui, Michal Drozdzal, Fernando Vilariño, Carolina Malagelada, Fernando Azpiroz, Petia Radeva, et al. (2012). Categorization and Segmentation of Intestinal Content Frames for Wireless Capsule Endoscopy. TITB - IEEE Transactions on Information Technology in Biomedicine, 16(6), 1341–1352.
Abstract: Wireless capsule endoscopy (WCE) is a device that allows the direct visualization of gastrointestinal tract with minimal discomfort for the patient, but at the price of a large amount of time for screening. In order to reduce this time, several works have proposed to automatically remove all the frames showing intestinal content. These methods label frames as {intestinal content – clear} without discriminating between types of content (with different physiological meaning) or the portion of image covered. In addition, since the presence of intestinal content has been identified as an indicator of intestinal motility, its accurate quantification can show a potential clinical relevance. In this paper, we present a method for the robust detection and segmentation of intestinal content in WCE images, together with its further discrimination between turbid liquid and bubbles. Our proposal is based on a twofold system. First, frames presenting intestinal content are detected by a support vector machine classifier using color and textural information. Second, intestinal content frames are segmented into {turbid, bubbles, and clear} regions. We show a detailed validation using a large dataset. Our system outperforms previous methods and, for the first time, discriminates between turbid from bubbles media.
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Sergio Escalera, Josep Moya, Laura Igual, Veronica Violant, & Maria Teresa Anguera. (2012). Análisis Comportamental Automatizado de TDAH: la Influencia de la Variable Motivación. In IPSI – Cosmocaixa, Jornadas "Empremtes del present, efectes en la psicoanàlisi, la cultura i la societat.
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Sergio Escalera. (2012). Human Behavior Analysis From Depth Maps. In F.J. Perales, R.B. Fisher, & T.B. Moeslund (Eds.), 7th Conference on Articulated Motion and Deformable Objects (Vol. 7378, pp. 282–292). Springer Heidelberg.
Abstract: Pose Recovery (PR) and Human Behavior Analysis (HBA) have been a main focus of interest from the beginnings of Computer Vision and Machine Learning. PR and HBA were originally addressed by the analysis of still images and image sequences. More recent strategies consisted of Motion Capture technology (MOCAP), based on the synchronization of multiple cameras in controlled environments; and the analysis of depth maps from Time-of-Flight (ToF) technology, based on range image recording from distance sensor measurements. Recently, with the appearance of the multi-modal RGBD information provided by the low cost Kinect \textsfTM sensor (from RGB and Depth, respectively), classical methods for PR and HBA have been redefined, and new strategies have been proposed. In this paper, the recent contributions and future trends of multi-modal RGBD data analysis for PR and HBA are reviewed and discussed.
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Simeon Petkov, Adriana Romero, Xavier Carrillo, Petia Radeva, & Carlo Gatta. (2012). Robust and accurate diaphragm border detection in cardiac X-Ray angiographies. In Statistical Atlases And Computational Models Of The Heart: Imaging and Modelling Challenges (Vol. 7746, pp. 225–234). LNCS.
Abstract: Workshop STACOM, dins del MICCAI
X-ray angiography is the most common imaging modality employed in the diagnosis of coronary diseases prior to or during a catheter-based intervention. The analysis of the patient X-Ray sequence can provide useful information about the degree of arterial stenosis, the myocardial perfusion and other clinical parameters. If the sequence has been acquired to evaluate the perfusion grade, the opacity due to the diaphragm could potentially hinder any kind of visual inspection and make more difficult a computer aided measurements. In this paper we propose an accurate and robust method to automatically identify the diaphragm border in each frame. Quantitative evaluation on a set of 11 sequences shows that the proposed algorithm outperforms previous methods.
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Adriana Romero, Simeon Petkov, Carlo Gatta, M.Sabate, & Petia Radeva. (2012). Efficient automatic segmentation of vessels. In 16th Conference on Medical Image Understanding and Analysis.
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