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Author Debora Gil; Jaume Garcia; Aura Hernandez-Sabate; Enric Marti
Title Manifold parametrization of the left ventricle for a statistical modelling of its complete anatomy Type Conference Article
Year 2010 Publication 8th Medical Imaging Abbreviated Journal
Volume 7623 Issue 762304 Pages 304
Keywords
Abstract Distortion of Left Ventricle (LV) external anatomy is related to some dysfunctions, such as hypertrophy. The architecture of myocardial fibers determines LV electromechanical activation patterns as well as mechanics. Thus, their joined modelling would allow the design of specific interventions (such as peacemaker implantation and LV remodelling) and therapies (such as resynchronization). On one hand, accurate modelling of external anatomy requires either a dense sampling or a continuous infinite dimensional approach, which requires non-Euclidean statistics. On the other hand, computation of fiber models requires statistics on Riemannian spaces. Most approaches compute separate statistical models for external anatomy and fibers architecture. In this work we propose a general mathematical framework based on differential geometry concepts for computing a statistical model including, both, external and fiber anatomy. Our framework provides a continuous approach to external anatomy supporting standard statistics. We also provide a straightforward formula for the computation of the Riemannian fiber statistics. We have applied our methodology to the computation of complete anatomical atlas of canine hearts from diffusion tensor studies. The orientation of fibers over the average external geometry agrees with the segmental description of orientations reported in the literature.
Address
Corporate Author Thesis
Publisher SPIE Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference SPIE
Notes (up) IAM Approved no
Call Number IAM @ iam @ GGH2010a Serial 1522
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Author Debora Gil; Aura Hernandez-Sabate; Mireia Burnat; Steven Jansen; Jordi Martinez-Vilalta
Title Structure-Preserving Smoothing of Biomedical Images Type Conference Article
Year 2009 Publication 13th International Conference on Computer Analysis of Images and Patterns Abbreviated Journal
Volume 5702 Issue Pages 427-434
Keywords non-linear smoothing; differential geometry; anatomical structures segmentation; cardiac magnetic resonance; computerized tomography.
Abstract Smoothing of biomedical images should preserve gray-level transitions between adjacent tissues, while restoring contours consistent with anatomical structures. Anisotropic diffusion operators are based on image appearance discontinuities (either local or contextual) and might fail at weak inter-tissue transitions. Meanwhile, the output of block-wise and morphological operations is prone to present a block structure due to the shape and size of the considered pixel neighborhood. In this contribution, we use differential geometry concepts to define a diffusion operator that restricts to image consistent level-sets. In this manner, the final state is a non-uniform intensity image presenting homogeneous inter-tissue transitions along anatomical structures, while smoothing intra-structure texture. Experiments on different types of medical images (magnetic resonance, computerized tomography) illustrate its benefit on a further process (such as segmentation) of images.
Address Münster, Germany
Corporate Author Thesis
Publisher Springer Berlin Heidelberg Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title LNCS
Series Volume Series Issue Edition
ISSN 0302-9743 ISBN 978-3-642-03766-5 Medium
Area Expedition Conference CAIP
Notes (up) IAM Approved no
Call Number IAM @ iam @ GHB2009 Serial 1527
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Author F.Guirado; Ana Ripoll; C.Roig; Aura Hernandez-Sabate; Emilio Luque
Title Exploiting Throughput for Pipeline Execution in Streaming Image Processing Applications Type Book Chapter
Year 2006 Publication Euro-Par 2006 Parallel Processing Abbreviated Journal LNCS
Volume 4128 Issue Pages 1095-1105
Keywords 12th International Euro–Par Conference
Abstract There is a large range of image processing applications that act on an input sequence of image frames that are continuously received. Throughput is a key performance measure to be optimized when execu- ting them. In this paper we propose a new task replication methodology for optimizing throughput for an image processing application in the field of medicine. The results show that by applying the proposed methodo- logy we are able to achieve the desired throughput in all cases, in such a way that the input frames can be processed at any given rate.
Address
Corporate Author Thesis
Publisher Springer-Verlag Berlin Heidelberg Place of Publication Dresden, Germany (European Union) Editor UAB; W, E.N.; et al.
Language Summary Language Original Title
Series Editor Series Title Lecture Notes In Computer Science Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference Euro–Par
Notes (up) IAM Approved no
Call Number IAM @ iam @ GRR2006a Serial 1542
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Author Aura Hernandez-Sabate; Debora Gil; Albert Teis
Title How Do Conservation Laws Define a Motion Suppression Score in In-Vivo Ivus Sequences? Type Conference Article
Year 2007 Publication Proc. IEEE Ultrasonics Symp Abbreviated Journal
Volume Issue Pages 2231-2234
Keywords validation standards; IVUS motion compensation; conservation laws.
Abstract Evaluation of arterial tissue biomechanics for diagnosis and treatment of cardiovascular diseases is an active research field in the biomedical imaging processing area. IntraVascular UltraSound (IVUS) is a unique tool for such assessment since it reflects tissue morphology and deformation. A proper quantification and visualization of both properties is hindered by vessel structures misalignments introduced by cardiac dynamics. This has encouraged development of IVUS motion compensation techniques. However, there is a lack of an objective evaluation of motion reduction ensuring a reliable clinical application This work reports a novel score, the Conservation of Density Rate (CDR), for validation of motion compensation in in-vivo pullbacks. Synthetic experiments validate the proposed score as measure of motion parameters accuracy; while results in in vivo pullbacks show its reliability in clinical cases.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes (up) IAM Approved no
Call Number IAM @ iam @ HTG2007 Serial 1550
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Author Enric Marti; Ferran Poveda; Antoni Gurgui; Debora Gil
Title Aprendizaje Basado en Proyectos en Ingeniería Informática. Resultados y reflexiones de seis años de experiencia Type Miscellaneous
Year 2011 Publication Actas del Simposio-Taller JENUI 2011 Abbreviated Journal
Volume Issue Pages 1-8
Keywords
Abstract In this workshop a 6 years experience in Project Based Learning (PBL) in Computer Graphics, Computer Engineering course at the Autonomous University of Barcelona (UAB) is presented. We use a Moodle environment suited to manage the documentation generated in PBL. The course is organized by means of two alternative routes: a classic itinerary of lectures and test-based evaluation and another with PBL. In the PBL itinerary we explain the organization in teamgroups, homework tutoring and monitoring and evaluation guidelines for students. We provide some of the work done by students, and the results of assessment surveys carried out to students during these years. We report the evolution of our PBL itinerary in terms of, both, organization and student surveys.
The workshop aims at discussing about on the advantages and disadvantages of using these active methodologies in technical degrees such as computer engineering, in order to debate about the most suitable way of organizing PBL and assessing students learning rate.
Address Sevilla, Spain
Corporate Author Thesis
Publisher Place of Publication Editor
Language spanish Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 978-84-694-5440-4 Medium
Area Expedition Conference JENUI
Notes (up) IAM Approved no
Call Number IAM @ iam @ MPG2011 Serial 1584
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Author Enric Marti
Title Aplicació de la metodología d’Aprenentatge basat en Proyectes en l’assignatura de Gràfics per Computador d’enginyeria Informàtica. Balanç de Quatre anys d’experiència Type Miscellaneous
Year 2008 Publication revista EINES Abbreviated Journal
Volume 6 Issue Pages 85-99
Keywords
Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes (up) IAM Approved no
Call Number IAM @ iam @ MAR2008b Serial 1585
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Author Enric Marti
Title Project Based Learning in engineering Type Miscellaneous
Year 2008 Publication Simposium on Problem Based learning (PBL) Abbreviated Journal
Volume Issue Pages
Keywords
Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Lleida Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes (up) IAM Approved no
Call Number IAM @ iam @ MAR2008a Serial 1586
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Author Enric Marti; Jordi Regincos; Jaime Lopez-Krahe
Title Interpretación de Dibujos Lineales a Mano Alzada Representando Escenas Tridimensionales Type Conference Article
Year 1991 Publication Primer Congreso Español de Informática. Abbreviated Journal
Volume Issue Pages
Keywords
Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes (up) IAM Approved no
Call Number IAM @ iam @ MRL1991 Serial 1610
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Author Ferran Poveda; Jaume Garcia; Enric Marti; Debora Gil
Title Validation of the myocardial architecture in DT-MRI tractography Type Conference Article
Year 2010 Publication Medical Image Computing in Catalunya: Graduate Student Workshop Abbreviated Journal
Volume Issue Pages 29-30
Keywords
Abstract Deep understanding of myocardial structure may help to link form and funcion of the heart unraveling crucial knowledge for medical and surgical clinical procedures and studies. In this work we introduce two visualization techniques based on DT-MRI streamlining able to decipher interesting properties of the architectural organization of the heart.
Address
Corporate Author Thesis
Publisher Place of Publication Girona (Spain) Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference MICCAT
Notes (up) IAM Approved no
Call Number IAM @ iam @ PGM2010 Serial 1626
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Author Oriol Rodriguez-Leor; Debora Gil; Eduard Fernandez-Nofrerias; H. Tizon; S. Montserrat; Vicente del Valle; J. Mauri
Title Caracterització de la Perfusió Miocàrdica mitjançant anàlisi estadístic de l espectre en l angiografia de contrast Type Conference Article
Year 2007 Publication XIX Congrés de la Societat Catalana de Cardiologia de Barcelona Abbreviated Journal
Volume Issue Pages 130
Keywords
Abstract La valoració de la integritat de la microcirculació coronària aporta informació pronòstica en pacients amb infart agut de miocardi en els que es realitza angioplastia primària. Aquesta valoració és subjectiva i presenta una important variabilitat si no es duta a terme per personal experimentat. Presentem una eina d’anàlisi d’imatge que permet fer una valoració de la microcirculació coronària a partir de seqüències d’angiografia. Hem analitzat les variacions locals en el nivell de gris de la imatge durant la seqüència angiogràfica. Hem identificat els principals fenòmens observats (respiració, batec cardíac, tinció arterial, tinció miocàrdica i soroll radiològic) mitjançant un anàlisi estadístic de l’espectre de Fourier de l’evolució al llarg del temps de la mitja local. Aquest mateix anàlisis permet determinat la influència de cadascun d’ells en la extracció del patró de tinció i selecciona la respiració com el fenomen que més distorsiona el patró de tinció original. Els descriptors proposats s’obtenen fora del rang espectral respiratori. Hem testat la seva capacitat per a detectar els tres fenòmens principals (tinció miocàrdica (MS), tinció arterial (AS) i soroll (NS)) independentment de la respiració. La capacitat de discriminació dels descriptors ha estat valorada mitjançant un mètode de crossvalidation en 30 seqüències d’angiografia. Els descriptors emprats permeten caracteritzar la tinció miocàrdica amb una alta eficiència i fiabilitat. A més no hi ha diferències significatives en l’anàlisi de les seqüències obtingudes amb el pacient respirant amb normalitat o en apnea
Address
Corporate Author Thesis
Publisher Place of Publication Barcelona (Spain) Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes (up) IAM Approved no
Call Number IAM @ iam @ RGF2007 Serial 1639
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Author Sergio Vera
Title Finger joint modelling from hand X-ray images for assessing rheumatoid arthritis Type Report
Year 2010 Publication CVC Technical Report Abbreviated Journal
Volume 164 Issue Pages
Keywords Rheumatoid arthritis; joint detection; X-ray; Van der Heijde score
Abstract Rheumatoid arthritis is an autoimmune, systemic, inflammatory disorder that mainly af- fects bone joints. While there is no cure for this disease, continuous advances on palliative treatments require frequent verification of patient’s illness evolution. Such evolution is mea- sured through several available semi-quantitative methods that require evaluation of hand and foot X-ray images. Accurate assessment is a time consuming task that requires highly trained personnel. This hinders a generalized use in clinical practice for early diagnose and disease follow-up. In the context of the automatization of such evaluation methods we present a method for detection and characterization of finger joints in hand radiography images. Several measures for assessing the reduction of joint space width are proposed. We compare for the first time such measures to the Van der Heijde score, the gold standard method for rheumatoid arthritis assessment. The proposed method outperforms existing strategies with a detection rate above 95%. Our comparison to Van der Heijde index shows a promising correlation that encourages further research.
Address
Corporate Author Thesis Master's thesis
Publisher Place of Publication Bellaterra 01893, Barcelona, Spain Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes (up) IAM Approved no
Call Number IAM @ iam @ Ver2010 Serial 1661
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Author David Roche; Debora Gil; Jesus Giraldo
Title An inference model for analyzing termination conditions of Evolutionary Algorithms Type Conference Article
Year 2011 Publication 14th Congrès Català en Intel·ligencia Artificial Abbreviated Journal
Volume Issue Pages 216-225
Keywords Evolutionary Computation Convergence, Termination Conditions, Statistical Inference
Abstract In real-world problems, it is mandatory to design a termination condition for Evolutionary Algorithms (EAs) ensuring stabilization close to the unknown optimum. Distribution-based quantities are good candidates as far as suitable parameters are used. A main limitation for application to real-world problems is that such parameters strongly depend on the topology of the objective function, as well as, the EA paradigm used.
We claim that the termination problem would be fully solved if we had a model measuring to what extent a distribution-based quantity asymptotically behaves like the solution accuracy. We present a regression-prediction model that relates any two given quantities and reports if they can be statistically swapped as termination conditions. Our framework is applied to two issues. First, exploring if the parameters involved in the computation of distribution-based quantities influence their asymptotic behavior. Second, to what extent existing distribution-based quantities can be asymptotically exchanged for the accuracy of the EA solution.
Address Lleida, Catalonia (Spain)
Corporate Author Associació Catalana Intel·ligència Artificial Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 978-1-60750-841-0 Medium
Area Expedition Conference CCIA
Notes (up) IAM Approved no
Call Number IAM @ iam @ RGG2011a Serial 1677
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Author Ferran Poveda; Debora Gil ;Albert Andaluz ;Enric Marti
Title Multiscale Tractography for Representing Heart Muscular Architecture Type Conference Article
Year 2011 Publication In MICCAI 2011 Workshop on Computational Diffusion MRI Abbreviated Journal
Volume Issue Pages
Keywords
Abstract Deep understanding of myocardial structure of the heart would unravel crucial knowledge for clinical and medical procedures. Although the muscular architecture of the heart has been debated by countless researchers, the controversy is still alive. Diffusion Tensor MRI, DT-MRI, is a unique imaging technique for computational validation of the muscular structure of the heart. By the complex arrangement of myocites, existing techniques can not provide comprehensive descriptions of the global muscular architecture. In this paper we introduce a multiresolution reconstruction technique based on DT-MRI streamlining for simplified global myocardial model generation. Our reconstructions can restore the most complex myocardial structures and indicate a global helical organization
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language english Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference CDRMI
Notes (up) IAM Approved no
Call Number IAM @ iam @ PGA2011 Serial 1681
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Author Eric Amiel
Title Visualisation de vaisseaux sanguins Type Report
Year 2005 Publication Rapport de Stage Abbreviated Journal
Volume Issue Pages
Keywords
Abstract
Address
Corporate Author Université Paul Sabatier Toulouse III Thesis Bachelor's thesis
Publisher Université Paul Sabatier Toulouse III Place of Publication Toulouse Editor Enric Marti
Language French Summary Language French Original Title
Series Editor IUP Systèmes Intelligents Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes (up) IAM Approved no
Call Number IAM @ iam @ Ami2005 Serial 1690
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Author Debora Gil; Agnes Borras; Manuel Ballester; Francesc Carreras; Ruth Aris; Manuel Vazquez; Enric Marti; Ferran Poveda
Title MIOCARDIA: Integrating cardiac function and muscular architecture for a better diagnosis Type Conference Article
Year 2011 Publication 14th International Symposium on Applied Sciences in Biomedical and Communication Technologies Abbreviated Journal
Volume Issue Pages
Keywords
Abstract Deep understanding of myocardial structure of the heart would unravel crucial knowledge for clinical and medical procedures. The MIOCARDIA project is a multidisciplinary project in cooperation with l'Hospital de la Santa Creu i de Sant Pau, Clinica la Creu Blanca and Barcelona Supercomputing Center. The ultimate goal of this project is defining a computational model of the myocardium. The model takes into account the deep interrelation between the anatomy and the mechanics of the heart. The paper explains the workflow of the MIOCARDIA project. It also introduces a multiresolution reconstruction technique based on DT-MRI streamlining for simplified global myocardial model generation. Our reconstructions can restore the most complex myocardial structures and provides evidences of a global helical organization.
Address Barcelona; Spain
Corporate Author Association for Computing Machinery Thesis
Publisher Place of Publication Barcelona, Spain Editor Association for Computing Machinery
Language english Summary Language english Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 978-1-4503-0913-4 Medium
Area Expedition Conference ISABEL
Notes (up) IAM Approved no
Call Number IAM @ iam @ GGB2011 Serial 1691
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