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Author Antoni Rosell; Sonia Baeza; S. Garcia-Reina; JL. Mate; Ignasi Guasch; I. Nogueira; I. Garcia-Olive; Guillermo Torres; Carles Sanchez; Debora Gil
Title EP01.05-001 Radiomics to Increase the Effectiveness of Lung Cancer Screening Programs. Radiolung Preliminary Results Type Journal Article
Year 2022 Publication Journal of Thoracic Oncology Abbreviated Journal JTO
Volume 17 Issue 9 Pages S182
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Notes (down) IAM Approved no
Call Number Admin @ si @ RBG2022b Serial 3834
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Author Antoni Rosell; Sonia Baeza; S. Garcia-Reina; JL. Mate; Ignasi Guasch; I. Nogueira; I. Garcia-Olive; Guillermo Torres; Carles Sanchez; Debora Gil
Title Radiomics to increase the effectiveness of lung cancer screening programs. Radiolung preliminary results. Type Journal Article
Year 2022 Publication European Respiratory Journal Abbreviated Journal ERJ
Volume 60 Issue 66 Pages
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Notes (down) IAM Approved no
Call Number Admin @ si @ RBG2022c Serial 3835
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Author Jose Elias Yauri; M. Lagos; H. Vega-Huerta; P. de-la-Cruz; G.L.E Maquen-Niño; E. Condor-Tinoco
Title Detection of Epileptic Seizures Based-on Channel Fusion and Transformer Network in EEG Recordings Type Journal Article
Year 2023 Publication International Journal of Advanced Computer Science and Applications Abbreviated Journal IJACSA
Volume 14 Issue 5 Pages 1067-1074
Keywords Epilepsy; epilepsy detection; EEG; EEG channel fusion; convolutional neural network; self-attention
Abstract According to the World Health Organization, epilepsy affects more than 50 million people in the world, and specifically, 80% of them live in developing countries. Therefore, epilepsy has become among the major public issue for many governments and deserves to be engaged. Epilepsy is characterized by uncontrollable seizures in the subject due to a sudden abnormal functionality of the brain. Recurrence of epilepsy attacks change people’s lives and interferes with their daily activities. Although epilepsy has no cure, it could be mitigated with an appropriated diagnosis and medication. Usually, epilepsy diagnosis is based on the analysis of an electroencephalogram (EEG) of the patient. However, the process of searching for seizure patterns in a multichannel EEG recording is a visual demanding and time consuming task, even for experienced neurologists. Despite the recent progress in automatic recognition of epilepsy, the multichannel nature of EEG recordings still challenges current methods. In this work, a new method to detect epilepsy in multichannel EEG recordings is proposed. First, the method uses convolutions to perform channel fusion, and next, a self-attention network extracts temporal features to classify between interictal and ictal epilepsy states. The method was validated in the public CHB-MIT dataset using the k-fold cross-validation and achieved 99.74% of specificity and 99.15% of sensitivity, surpassing current approaches.
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Notes (down) IAM Approved no
Call Number Admin @ si @ Serial 3856
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Author Guillermo Torres; Jan Rodríguez Dueñas; Sonia Baeza; Antoni Rosell; Carles Sanchez; Debora Gil
Title Prediction of Malignancy in Lung Cancer using several strategies for the fusion of Multi-Channel Pyradiomics Images Type Conference Article
Year 2023 Publication 7th Workshop on Digital Image Processing for Medical and Automotive Industry in the framework of SYNASC 2023 Abbreviated Journal
Volume Issue Pages
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Abstract This study shows the generation process and the subsequent study of the representation space obtained by extracting GLCM texture features from computer-aided tomography (CT) scans of pulmonary nodules (PN). For this, data from 92 patients from the Germans Trias i Pujol University Hospital were used. The workflow focuses on feature extraction using Pyradiomics and the VGG16 Convolutional Neural Network (CNN). The aim of the study is to assess whether the data obtained have a positive impact on the diagnosis of lung cancer (LC). To design a machine learning (ML) model training method that allows generalization, we train SVM and neural network (NN) models, evaluating diagnosis performance using metrics defined at slice and nodule level.
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Area Expedition Conference DIPMAI
Notes (down) IAM Approved no
Call Number Admin @ si @ TRB2023 Serial 3926
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Author Guillermo Torres; Debora Gil; Antoni Rosell; S. Mena; Carles Sanchez
Title Virtual Radiomics Biopsy for the Histological Diagnosis of Pulmonary Nodules Type Conference Article
Year 2023 Publication 37th International Congress and Exhibition is organized by Computer Assisted Radiology and Surgery Abbreviated Journal
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Abstract Pòster
Address Munich; Germany; June 2023
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Area Expedition Conference CARS
Notes (down) IAM Approved no
Call Number Admin @ si @ TGR2023a Serial 3950
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Author Sonia Baeza; Debora Gil; Carles Sanchez; Guillermo Torres; Ignasi Garcia Olive; Ignasi Guasch; Samuel Garcia Reina; Felipe Andreo; Jose Luis Mate; Jose Luis Vercher; Antonio Rosell
Title Biopsia virtual radiomica para el diagnóstico histológico de nódulos pulmonares – Resultados intermedios del proyecto Radiolung Type Conference Article
Year 2023 Publication SEPAR Abbreviated Journal
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Address Granada; Spain; June 2023
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Area Expedition Conference SEPAR
Notes (down) IAM Approved no
Call Number Admin @ si @ BGS2023 Serial 3951
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Author Debora Gil; Guillermo Torres; Carles Sanchez
Title Transforming radiomic features into radiological words Type Conference Article
Year 2023 Publication IEEE International Symposium on Biomedical Imaging Abbreviated Journal
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Address Cartagena de Indias; Colombia; April 2023
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Area Expedition Conference ISBI
Notes (down) IAM Approved no
Call Number Admin @ si @ GTS2023 Serial 3952
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Author Pau Cano; Debora Gil; Eva Musulen
Title Towards automatic detection of helicobacter pylori in histological samples of gastric tissue Type Conference Article
Year 2023 Publication IEEE International Symposium on Biomedical Imaging Abbreviated Journal
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Address Cartagena de Indias; Colombia; April 2023
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Area Expedition Conference ISBI
Notes (down) IAM Approved no
Call Number Admin @ si @ CGM2023 Serial 3953
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Author Guillermo Torres; Debora Gil; Antonio Rosell; Sonia Baeza; Carles Sanchez
Title A radiomic biopsy for virtual histology of pulmonary nodules Type Conference Article
Year 2023 Publication IEEE International Symposium on Biomedical Imaging Abbreviated Journal
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Address Cartagena de Indias; Colombia; April 2023
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Area Expedition Conference ISBI
Notes (down) IAM Approved no
Call Number Admin @ si @ TGR2023b Serial 3954
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Author Jose Elias Yauri
Title Deep Learning Based Data Fusion Approaches for the Assessment of Cognitive States on EEG Signals Type Book Whole
Year 2023 Publication PhD Thesis, Universitat Autonoma de Barcelona-CVC Abbreviated Journal
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Abstract For millennia, the study of the couple brain-mind has fascinated the humanity in order to understand the complex nature of cognitive states. A cognitive state is the state of the mind at a specific time and involves cognition activities to acquire and process information for making a decision, solving a problem, or achieving a goal.
While normal cognitive states assist in the successful accomplishment of tasks; on the contrary, abnormal states of the mind can lead to task failures due to a reduced cognition capability. In this thesis, we focus on the assessment of cognitive states by means of the analysis of ElectroEncephaloGrams (EEG) signals using deep learning methods. EEG records the electrical activity of the brain using a set of electrodes placed on the scalp that output a set of spatiotemporal signals that are expected to be correlated to a specific mental process.
From the point of view of artificial intelligence, any method for the assessment of cognitive states using EEG signals as input should face several challenges. On the one hand, one should determine which is the most suitable approach for the optimal combination of the multiple signals recorded by EEG electrodes. On the other hand, one should have a protocol for the collection of good quality unambiguous annotated data, and an experimental design for the assessment of the generalization and transfer of models. In order to tackle them, first, we propose several convolutional neural architectures to perform data fusion of the signals recorded by EEG electrodes, at raw signal and feature levels. Four channel fusion methods, easy to incorporate into any neural network architecture, are proposed and assessed. Second, we present a method to create an unambiguous dataset for the prediction of cognitive mental workload using serious games and an Airbus-320 flight simulator. Third, we present a validation protocol that takes into account the levels of generalization of models based on the source and amount of test data.
Finally, the approaches for the assessment of cognitive states are applied to two use cases of high social impact: the assessment of mental workload for personalized support systems in the cockpit and the detection of epileptic seizures. The results obtained from the first use case show the feasibility of task transfer of models trained to detect workload in serious games to real flight scenarios. The results from the second use case show the generalization capability of our EEG channel fusion methods at k-fold cross-validation, patient-specific, and population levels.
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Corporate Author Thesis Ph.D. thesis
Publisher IMPRIMA Place of Publication Editor Aura Hernandez;Debora Gil
Language Summary Language Original Title
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Notes (down) IAM Approved no
Call Number Admin @ si @ Yau2023 Serial 3962
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Author Hugo Jair Escalante; Victor Ponce; Sergio Escalera; Xavier Baro; Alicia Morales-Reyes; Jose Martinez-Carranza
Title Evolving weighting schemes for the Bag of Visual Words Type Journal Article
Year 2017 Publication Neural Computing and Applications Abbreviated Journal Neural Computing and Applications
Volume 28 Issue 5 Pages 925–939
Keywords Bag of Visual Words; Bag of features; Genetic programming; Term-weighting schemes; Computer vision
Abstract The Bag of Visual Words (BoVW) is an established representation in computer vision. Taking inspiration from text mining, this representation has proved
to be very effective in many domains. However, in most cases, standard term-weighting schemes are adopted (e.g.,term-frequency or TF-IDF). It remains open the question of whether alternative weighting schemes could boost the
performance of methods based on BoVW. More importantly, it is unknown whether it is possible to automatically learn and determine effective weighting schemes from
scratch. This paper brings some light into both of these unknowns. On the one hand, we report an evaluation of the most common weighting schemes used in text mining, but rarely used in computer vision tasks. Besides, we propose an evolutionary algorithm capable of automatically learning weighting schemes for computer vision problems. We report empirical results of an extensive study in several computer vision problems. Results show the usefulness of the proposed method.
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Publisher Place of Publication Editor Springer
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Notes (down) HUPBA;MV; no menciona Approved no
Call Number Admin @ si @ EPE2017 Serial 2743
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Author Antonio Hernandez; Miguel Angel Bautista; Xavier Perez Sala; Victor Ponce; Sergio Escalera; Xavier Baro; Oriol Pujol; Cecilio Angulo
Title Probability-based Dynamic Time Warping and Bag-of-Visual-and-Depth-Words for Human Gesture Recognition in RGB-D Type Journal Article
Year 2014 Publication Pattern Recognition Letters Abbreviated Journal PRL
Volume 50 Issue 1 Pages 112-121
Keywords RGB-D; Bag-of-Words; Dynamic Time Warping; Human Gesture Recognition
Abstract PATREC5825
We present a methodology to address the problem of human gesture segmentation and recognition in video and depth image sequences. A Bag-of-Visual-and-Depth-Words (BoVDW) model is introduced as an extension of the Bag-of-Visual-Words (BoVW) model. State-of-the-art RGB and depth features, including a newly proposed depth descriptor, are analysed and combined in a late fusion form. The method is integrated in a Human Gesture Recognition pipeline, together with a novel probability-based Dynamic Time Warping (PDTW) algorithm which is used to perform prior segmentation of idle gestures. The proposed DTW variant uses samples of the same gesture category to build a Gaussian Mixture Model driven probabilistic model of that gesture class. Results of the whole Human Gesture Recognition pipeline in a public data set show better performance in comparison to both standard BoVW model and DTW approach.
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Notes (down) HuPBA;MV; 605.203 Approved no
Call Number Admin @ si @ HBP2014 Serial 2353
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Author Victor Ponce; Baiyu Chen; Marc Oliu; Ciprian Corneanu; Albert Clapes; Isabelle Guyon; Xavier Baro; Hugo Jair Escalante; Sergio Escalera
Title ChaLearn LAP 2016: First Round Challenge on First Impressions – Dataset and Results Type Conference Article
Year 2016 Publication 14th European Conference on Computer Vision Workshops Abbreviated Journal
Volume Issue Pages
Keywords Behavior Analysis; Personality Traits; First Impressions
Abstract This paper summarizes the ChaLearn Looking at People 2016 First Impressions challenge data and results obtained by the teams in the rst round of the competition. The goal of the competition was to automatically evaluate ve \apparent“ personality traits (the so-called \Big Five”) from videos of subjects speaking in front of a camera, by using human judgment. In this edition of the ChaLearn challenge, a novel data set consisting of 10,000 shorts clips from YouTube videos has been made publicly available. The ground truth for personality traits was obtained from workers of Amazon Mechanical Turk (AMT). To alleviate calibration problems between workers, we used pairwise comparisons between videos, and variable levels were reconstructed by tting a Bradley-Terry-Luce model with maximum likelihood. The CodaLab open source
platform was used for submission of predictions and scoring. The competition attracted, over a period of 2 months, 84 participants who are grouped in several teams. Nine teams entered the nal phase. Despite the diculty of the task, the teams made great advances in this round of the challenge.
Address Amsterdam; The Netherlands; October 2016
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Area Expedition Conference ECCVW
Notes (down) HuPBA;MV; 600.063 Approved no
Call Number Admin @ si @ PCP2016 Serial 2828
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Author Florin Popescu; Stephane Ayache; Sergio Escalera; Xavier Baro; Cecile Capponi; Patrick Panciatici; Isabelle Guyon
Title From geospatial observations of ocean currents to causal predictors of spatio-economic activity using computer vision and machine learning Type Conference Article
Year 2016 Publication European Geosciences Union General Assembly Abbreviated Journal
Volume 18 Issue Pages
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Abstract The big data transformation currently revolutionizing science and industry forges novel possibilities in multimodal analysis scarcely imaginable only a decade ago. One of the important economic and industrial problems that stand to benefit from the recent expansion of data availability and computational prowess is the prediction of electricity demand and renewable energy generation. Both are correlates of human activity: spatiotemporal energy consumption patterns in society are a factor of both demand (weather dependent) and supply, which determine cost – a relation expected to strengthen along with increasing renewable energy dependence. One of the main drivers of European weather patterns is the activity of the Atlantic Ocean and in particular its dominant Northern Hemisphere current: the Gulf Stream. We choose this particular current as a test case in part due to larger amount of relevant data and scientific literature available for refinement of analysis techniques.
This data richness is due not only to its economic importance but also to its size being clearly visible in radar and infrared satellite imagery, which makes it easier to detect using Computer Vision (CV). The power of CV techniques makes basic analysis thus developed scalable to other smaller and less known, but still influential, currents, which are not just curves on a map, but complex, evolving, moving branching trees in 3D projected onto a 2D image.
We investigate means of extracting, from several image modalities (including recently available Copernicus radar and earlier Infrared satellites), a parameterized presentation of the state of the Gulf Stream and its environment that is useful as feature space representation in a machine learning context, in this case with the EC’s H2020-sponsored ‘See.4C’ project, in the context of which data scientists may find novel predictors of spatiotemporal energy flow. Although automated extractors of Gulf Stream position exist, they differ in methodology and result. We shall attempt to extract more complex feature representation including branching points, eddies and parameterized changes in transport and velocity. Other related predictive features will be similarly developed, such as inference of deep water flux long the current path and wider spatial scale features such as Hough transform, surface turbulence indicators and temperature gradient indexes along with multi-time scale analysis of ocean height and temperature dynamics. The geospatial imaging and ML community may therefore benefit from a baseline of open-source techniques useful and expandable to other related prediction and/or scientific analysis tasks.
Address Vienna; Austria; April 2016
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Area Expedition Conference EGU
Notes (down) HuPBA;MV; Approved no
Call Number Admin @ si @ PAE2016 Serial 2772
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Author Sergio Escalera; Mercedes Torres-Torres; Brais Martinez; Xavier Baro; Hugo Jair Escalante; Isabelle Guyon; Georgios Tzimiropoulos; Ciprian Corneanu; Marc Oliu Simón; Mohammad Ali Bagheri; Michel Valstar
Title ChaLearn Looking at People and Faces of the World: Face AnalysisWorkshop and Challenge 2016 Type Conference Article
Year 2016 Publication 29th IEEE Conference on Computer Vision and Pattern Recognition Workshops Abbreviated Journal
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Abstract We present the 2016 ChaLearn Looking at People and Faces of the World Challenge and Workshop, which ran three competitions on the common theme of face analysis from still images. The first one, Looking at People, addressed age estimation, while the second and third competitions, Faces of the World, addressed accessory classification and smile and gender classification, respectively. We present two crowd-sourcing methodologies used to collect manual annotations. A custom-build application was used to collect and label data about the apparent age of people (as opposed to the real age). For the Faces of the World data, the citizen-science Zooniverse platform was used. This paper summarizes the three challenges and the data used, as well as the results achieved by the participants of the competitions. Details of the ChaLearn LAP FotW competitions can be found at http://gesture.chalearn.org.
Address Las Vegas; USA; June 2016
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Area Expedition Conference CVPRW
Notes (down) HuPBA;MV; Approved no
Call Number ETM2016 Serial 2849
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