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Eric Amiel. (2005). Visualisation de vaisseaux sanguins (Enric Marti, Ed.). Bachelor's thesis, Université Paul Sabatier Toulouse III, Toulouse.
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Debora Gil, Agnes Borras, Manuel Ballester, Francesc Carreras, Ruth Aris, Manuel Vazquez, et al. (2011). MIOCARDIA: Integrating cardiac function and muscular architecture for a better diagnosis. In Association for Computing Machinery (Ed.), 14th International Symposium on Applied Sciences in Biomedical and Communication Technologies. Barcelona, Spain.
Abstract: Deep understanding of myocardial structure of the heart would unravel crucial knowledge for clinical and medical procedures. The MIOCARDIA project is a multidisciplinary project in cooperation with l'Hospital de la Santa Creu i de Sant Pau, Clinica la Creu Blanca and Barcelona Supercomputing Center. The ultimate goal of this project is defining a computational model of the myocardium. The model takes into account the deep interrelation between the anatomy and the mechanics of the heart. The paper explains the workflow of the MIOCARDIA project. It also introduces a multiresolution reconstruction technique based on DT-MRI streamlining for simplified global myocardial model generation. Our reconstructions can restore the most complex myocardial structures and provides evidences of a global helical organization.
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Ivo Everts, Jan van Gemert, & Theo Gevers. (2013). Evaluation of Color STIPs for Human Action Recognition. In IEEE Conference on Computer Vision and Pattern Recognition (pp. 2850–2857).
Abstract: This paper is concerned with recognizing realistic human actions in videos based on spatio-temporal interest points (STIPs). Existing STIP-based action recognition approaches operate on intensity representations of the image data. Because of this, these approaches are sensitive to disturbing photometric phenomena such as highlights and shadows. Moreover, valuable information is neglected by discarding chromaticity from the photometric representation. These issues are addressed by Color STIPs. Color STIPs are multi-channel reformulations of existing intensity-based STIP detectors and descriptors, for which we consider a number of chromatic representations derived from the opponent color space. This enhanced modeling of appearance improves the quality of subsequent STIP detection and description. Color STIPs are shown to substantially outperform their intensity-based counterparts on the challenging UCF~sports, UCF11 and UCF50 action recognition benchmarks. Moreover, the results show that color STIPs are currently the single best low-level feature choice for STIP-based approaches to human action recognition.
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Fares Alnajar, Theo Gevers, Roberto Valenti, & Sennay Ghebreab. (2013). Calibration-free Gaze Estimation using Human Gaze Patterns. In 15th IEEE International Conference on Computer Vision (pp. 137–144).
Abstract: We present a novel method to auto-calibrate gaze estimators based on gaze patterns obtained from other viewers. Our method is based on the observation that the gaze patterns of humans are indicative of where a new viewer will look at [12]. When a new viewer is looking at a stimulus, we first estimate a topology of gaze points (initial gaze points). Next, these points are transformed so that they match the gaze patterns of other humans to find the correct gaze points. In a flexible uncalibrated setup with a web camera and no chin rest, the proposed method was tested on ten subjects and ten images. The method estimates the gaze points after looking at a stimulus for a few seconds with an average accuracy of 4.3 im. Although the reported performance is lower than what could be achieved with dedicated hardware or calibrated setup, the proposed method still provides a sufficient accuracy to trace the viewer attention. This is promising considering the fact that auto-calibration is done in a flexible setup , without the use of a chin rest, and based only on a few seconds of gaze initialization data. To the best of our knowledge, this is the first work to use human gaze patterns in order to auto-calibrate gaze estimators.
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Hamdi Dibeklioglu, Albert Ali Salah, & Theo Gevers. (2013). Like Father, Like Son: Facial Expression Dynamics for Kinship Verification. In 15th IEEE International Conference on Computer Vision (pp. 1497–1504).
Abstract: Kinship verification from facial appearance is a difficult problem. This paper explores the possibility of employing facial expression dynamics in this problem. By using features that describe facial dynamics and spatio-temporal appearance over smile expressions, we show that it is possible to improve the state of the art in this problem, and verify that it is indeed possible to recognize kinship by resemblance of facial expressions. The proposed method is tested on different kin relationships. On the average, 72.89% verification accuracy is achieved on spontaneous smiles.
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Jorge Bernal. (2009). Use of Projection and Back-projection Methods in Bidimensional Computed Tomography Image Reconstruction (Vol. 141). Master's thesis, , Barcelona, Spain.
Abstract: One of the biggest drawbacks related to the use of CT scanners is the cost (in memory and in time) associated. In this project many methods to simulate their functioning, but in a more feasible way (taking an industrial point of view), will be studied.
The main group of techniques that are being used are the one entitled as ’back-projection’. The concept behind is to simulate the X ray emission in CT scans by lines that cross with the image we want to reconstruct.
In the first part of this document euclidean geometry is used to face the tasks of projec- tion and back-projection. After analysing the results achieved it has been proved that this approach does not lead to a fully perfect reconstruction (and also has some other problems related to running time and memory cost). Because of this in the second part of the document ’Filtered Back-projection’ method is introduced in order to improve the results.
Filtered Back-projection methods rely on mathematical transforms (Fourier, Radon) in order to provide more accurate results that can be obtained in much less time. The main cause of this better results is the use of a filtering process before the back-projection in order to avoid high frequency-caused errors.
As a result of this project two different implementations (one for each approach) had been implemented in order to compare their performance.
Keywords: Projection, Back-projection, CT scan, Euclidean geometry, Radon transform
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Jasper Uilings, Koen E.A. van de Sande, Theo Gevers, & Arnold Smeulders. (2013). Selective Search for Object Recognition. IJCV - International Journal of Computer Vision, 104(2), 154–171.
Abstract: This paper addresses the problem of generating possible object locations for use in object recognition. We introduce selective search which combines the strength of both an exhaustive search and segmentation. Like segmentation, we use the image structure to guide our sampling process. Like exhaustive search, we aim to capture all possible object locations. Instead of a single technique to generate possible object locations, we diversify our search and use a variety of complementary image partitionings to deal with as many image conditions as possible. Our selective search results in a small set of data-driven, class-independent, high quality locations, yielding 99 % recall and a Mean Average Best Overlap of 0.879 at 10,097 locations. The reduced number of locations compared to an exhaustive search enables the use of stronger machine learning techniques and stronger appearance models for object recognition. In this paper we show that our selective search enables the use of the powerful Bag-of-Words model for recognition. The selective search software is made publicly available (Software: http://disi.unitn.it/~uijlings/SelectiveSearch.html).
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Zeynep Yucel, Albert Ali Salah, Çetin Meriçli, Tekin Meriçli, Roberto Valenti, & Theo Gevers. (2013). Joint Attention by Gaze Interpolation and Saliency. T-CIBER - IEEE Transactions on cybernetics, 829–842.
Abstract: Joint attention, which is the ability of coordination of a common point of reference with the communicating party, emerges as a key factor in various interaction scenarios. This paper presents an image-based method for establishing joint attention between an experimenter and a robot. The precise analysis of the experimenter's eye region requires stability and high-resolution image acquisition, which is not always available. We investigate regression-based interpolation of the gaze direction from the head pose of the experimenter, which is easier to track. Gaussian process regression and neural networks are contrasted to interpolate the gaze direction. Then, we combine gaze interpolation with image-based saliency to improve the target point estimates and test three different saliency schemes. We demonstrate the proposed method on a human-robot interaction scenario. Cross-subject evaluations, as well as experiments under adverse conditions (such as dimmed or artificial illumination or motion blur), show that our method generalizes well and achieves rapid gaze estimation for establishing joint attention.
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Jorge Bernal, F. Javier Sanchez, & Fernando Vilariño. (2011). Current Challenges on Polyp Detection in Colonoscopy Videos: From Region Segmentation to Region Classification. a Pattern Recognition-based Approach.ased Approach. In K. Djemal (Ed.), 2nd International Workshop on Medical Image Analysis and Descriptionfor Diagnosis Systems (pp. 62–71). SciTePress.
Abstract: In this paper we present our approach on real-time polyp detection in colonoscopy videos. Our method consists of three stages: Image Segmentation, Region Description and Image Classification. Taking into account the constraints of our project, we introduce our segmentation system that is based on the model of appearance of the polyp that we have defined after observing real videos from colonoscopy processes. The output of this stage will ideally be a low number of regions of which one of them should cover the whole polyp region (if there is one in the image). This regions will be described in terms of features and, as a result of a machine learning schema, classified based on the values that they have for the several features that we will use on their description. Although we are still on the early stages of the project, we present some preliminary segmentation results that indicates that we are going in a good direction.
Keywords: Medical Imaging, Colonoscopy, Pattern Recognition, Segmentation, Polyp Detection, Region Description, Machine Learning, Real-time.
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Jorge Bernal, F. Javier Sanchez, & Fernando Vilariño. (2011). A Region Segmentation Method for Colonoscopy Images Using a Model of Polyp Appearance. In Mario João and Hernández J. and S. Vitrià (Ed.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 134–143 ). LNCS.
Abstract: This work aims at the segmentation of colonoscopy images into a minimum number of informative regions. Our method performs in a way such, if a polyp is present in the image, it will be exclusively and totally contained in a single region. This result can be used in later stages to classify regions as polyp-containing candidates. The output of the algorithm also defines which regions can be considered as non-informative. The algorithm starts with a high number of initial regions and merges them taking into account the model of polyp appearance obtained from available data. The results show that our segmentations of polyp regions are more accurate than state-of-the-art methods.
Keywords: Colonoscopy, Polyp Detection, Region Merging, Region Segmentation.
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Jorge Bernal, Fernando Vilariño, & F. Javier Sanchez. (2011). Towards Intelligent Systems for Colonoscopy. In Paul Miskovitz (Ed.), Colonoscopy (Vol. 1, pp. 257–282). Intech.
Abstract: In this chapter we present tools that can be used to build intelligent systems for colonoscopy.
The idea is, by using methods based on computer vision and artificial intelligence, add significant value to the colonoscopy procedure. Intelligent systems are being used to assist in other medical interventions
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Jorge Bernal, F. Javier Sanchez, & Fernando Vilariño. (2011). Integration of Valley Orientation Distribution for Polyp Region Identification in Colonoscopy. In In MICCAI 2011 Workshop on Computational and Clinical Applications in Abdominal Imaging (Vol. 6668, pp. 76–83). Lecture Notes in Computer Science. Springer Link.
Abstract: This work presents a region descriptor based on the integration of the information that the depth of valleys image provides. The depth of valleys image is based on the presence of intensity valleys around polyps due to the image acquisition. Our proposed method consists of defining, for each point, a series of radial sectors around it and then accumulates the maxima of the depth of valleys image only if the orientation of the intensity valley coincides with the orientation of the sector above. We apply our descriptor to a prior segmentation of the images and we present promising results on polyp detection, outperforming other approaches that also integrate depth of valleys information.
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Jorge Bernal, F. Javier Sanchez, & Fernando Vilariño. (2011). Depth of Valleys Accumulation Algorithm for Object Detection. In 14th Congrès Català en Intel·ligencia Artificial (Vol. 1, pp. 71–80).
Abstract: This work aims at detecting in which regions the objects in the image are by using information about the intensity of valleys, which appear to surround ob- jects in images where the source of light is in the line of direction than the camera. We present our depth of valleys accumulation method, which consists of two stages: first, the definition of the depth of valleys image which combines the output of a ridges and valleys detector with the morphological gradient to measure how deep is a point inside a valley and second, an algorithm that denotes points of the image as interior to objects those which are inside complete or incomplete boundaries in the depth of valleys image. To evaluate the performance of our method we have tested it on several application domains. Our results on object region identification are promising, specially in the field of polyp detection in colonoscopy videos, and we also show its applicability in different areas.
Keywords: Object Recognition, Object Region Identification, Image Analysis, Image Processing
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Petia Radeva, Jordi Vitria, Fernando Vilariño, Panagiota Spyridonos, Fernando Azpiroz, Juan Malagelada, et al. (2009). Cascade analysis for intestinal contraction detection. US Patent Office.
Abstract: A method and system cascade analysisi for intestinal contraction detection is provided by extracting from image frames captured in-vivo. The method and system also relate to the detection of turbid liquids in intestinal tracts, to automatic detection of video image frames taken in the gastrointestinal tract including a field of view obstructed by turbid media, and more particulary, to extraction of image data obstructed by turbid media.
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Panagiota Spyridonos, Fernando Vilariño, Jordi Vitria, Petia Radeva, Fernando Azpiroz, & Juan Malagelada. (2011). Device, system and method for automatic detection of contractile activity in an image frame.
Abstract: A device, system and method for automatic detection of contractile activity of a body lumen in an image frame is provided, wherein image frames during contractile activity are captured and/or image frames including contractile activity are automatically detected, such as through pattern recognition and/or feature extraction to trace image frames including contractions, e.g., with wrinkle patterns. A manual procedure of annotation of contractions, e.g. tonic contractions in capsule endoscopy, may consist of the visualization of the whole video by a specialist, and the labeling of the contraction frames. Embodiments of the present invention may be suitable for implementation in an in vivo imaging system.
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