Aura Hernandez-Sabate, & Debora Gil. (2012). The Benefits of IVUS Dynamics for Retrieving Stable Models of Arteries. In Yasuhiro Honda (Ed.), Intravascular Ultrasound (pp. 185–206). Intech.
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Sergio Vera, Debora Gil, Agnes Borras, F. Javier Sanchez, Frederic Perez, Marius G. Linguraru, et al. (2012). Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs. In H. Yoshida et al (Ed.), Workshop on Computational and Clinical Applications in Abdominal Imaging (Vol. 7029, 223–230). LNCS. Berlin: Springer Link.
Abstract: Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D
objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial
manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our
method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs,
exploring the use of medial manifolds for the representation of multi-organ relations.
Keywords: medial manifolds, abdomen.
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Sergio Vera, Debora Gil, Antonio Lopez, & Miguel Angel Gonzalez Ballester. (2012). Multilocal Creaseness Measure. IJ - The Insight Journal.
Abstract: This document describes the implementation using the Insight Toolkit of an algorithm for detecting creases (ridges and valleys) in N-dimensional images, based on the Local Structure Tensor of the image. In addition to the filter used to calculate the creaseness image, a filter for the computation of the structure tensor is also included in this submission.
Keywords: Ridges, Valley, Creaseness, Structure Tensor, Skeleton,
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David Roche, Debora Gil, & Jesus Giraldo. (2012). Assessing agonist efficacy in an uncertain Em world. In A. Christopoulus and M. Bouvier (Ed.), 40th Keystone Symposia on mollecular and celular biology (79). Keystone Symposia.
Abstract: The operational model of agonism has been widely used for the analysis of agonist action since its formulation in 1983. The model includes the Em parameter, which is defined as the maximum response of the system. The methods for Em estimation provide Em values not significantly higher than the maximum responses achieved by full agonists. However, it has been found that that some classes of compounds as, for instance, superagonists and positive allosteric modulators can increase the full agonist maximum response, implying upper limits for Em and thereby posing doubts on the validity of Em estimates. Because of the correlation between Em and operational efficacy, τ, wrong Em estimates will yield wrong τ estimates.
In this presentation, the operational model of agonism and various methods for the simulation of allosteric modulation will be analyzed. Alternatives for curve fitting will be presented and discussed.
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Albert Andaluz. (2012). Harmonic Phase Flow: User's guide. Barcelona: CVC.
Abstract: HPF is a plugin for the computation of clinical scores under Osirix.
This manual provides a basic guide for experienced clinical staff. Chapter 1 provides the theoretical background in which this plugin is based.
Next, in chapter 2 we provide basic instructions for installing and uninstalling this plugin. chapter 3we shows a step-by-step scenario to compute clinical scores from tagged-MRI images with HPF. Finally, in chapter 4 we provide a quick guide for plugin developers
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Patricia Marquez, Debora Gil, & Aura Hernandez-Sabate. (2012). Error Analysis for Lucas-Kanade Based Schemes. In 9th International Conference on Image Analysis and Recognition (Vol. 7324, pp. 184–191). LNCS. Springer-Verlag Berlin Heidelberg.
Abstract: Optical flow is a valuable tool for motion analysis in medical imaging sequences. A reliable application requires determining the accuracy of the computed optical flow. This is a main challenge given the absence of ground truth in medical sequences. This paper presents an error analysis of Lucas-Kanade schemes in terms of intrinsic design errors and numerical stability of the algorithm. Our analysis provides a confidence measure that is naturally correlated to the accuracy of the flow field. Our experiments show the higher predictive value of our confidence measure compared to existing measures.
Keywords: Optical flow, Confidence measure, Lucas-Kanade, Cardiac Magnetic Resonance
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David Geronimo, Frederic Lerasle, & Antonio Lopez. (2012). State-driven particle filter for multi-person tracking. In J. Blanc-Talon et al. (Ed.), 11th International Conference on Advanced Concepts for Intelligent Vision Systems (Vol. 7517, pp. 467–478). Heidelberg: Springer.
Abstract: Multi-person tracking can be exploited in applications such as driver assistance, surveillance, multimedia and human-robot interaction. With the help of human detectors, particle filters offer a robust method able to filter noisy detections and provide temporal coherence. However, some traditional problems such as occlusions with other targets or the scene, temporal drifting or even the lost targets detection are rarely considered, making the systems performance decrease. Some authors propose to overcome these problems using heuristics not explained
and formalized in the papers, for instance by defining exceptions to the model updating depending on tracks overlapping. In this paper we propose to formalize these events by the use of a state-graph, defining the current state of the track (e.g., potential , tracked, occluded or lost) and the transitions between states in an explicit way. This approach has the advantage of linking track actions such as the online underlying models updating, which gives flexibility to the system. It provides an explicit representation to adapt the multiple parallel trackers depending on the context, i.e., each track can make use of a specific filtering strategy, dynamic model, number of particles, etc. depending on its state. We implement this technique in a single-camera multi-person tracker and test
it in public video sequences.
Keywords: human tracking
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Javier Marin, David Geronimo, David Vazquez, & Antonio Lopez. (2012). Pedestrian Detection: Exploring Virtual Worlds. In Handbook of Pattern Recognition: Methods and Application (Vol. 5, pp. 145–162). iConcept Press.
Abstract: Handbook of pattern recognition will include contributions from university educators and active research experts. This Handbook is intended to serve as a basic reference on methods and applications of pattern recognition. The primary aim of this handbook is providing the community of pattern recognition with a readable, easy to understand resource that covers introductory, intermediate and advanced topics with equal clarity. Therefore, the Handbook of pattern recognition can serve equally well as reference resource and as classroom textbook. Contributions cover all methods, techniques and applications of pattern recognition. A tentative list of relevant topics might include: 1- Statistical, structural, syntactic pattern recognition. 2- Neural networks, machine learning, data mining. 3- Discrete geometry, algebraic, graph-based techniques for pattern recognition. 4- Face recognition, Signal analysis, image coding and processing, shape and texture analysis. 5- Document processing, text and graphics recognition, digital libraries. 6- Speech recognition, music analysis, multimedia systems. 7- Natural language analysis, information retrieval. 8- Biometrics, biomedical pattern analysis and information systems. 9- Other scientific, engineering, social and economical applications of pattern recognition. 10- Special hardware architectures, software packages for pattern recognition.
Keywords: Virtual worlds; Pedestrian Detection; Domain Adaptation
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Yainuvis Socarras, David Vazquez, Antonio Lopez, David Geronimo, & Theo Gevers. (2012). Improving HOG with Image Segmentation: Application to Human Detection. In J. Blanc-Talon et al. (Ed.), 11th International Conference on Advanced Concepts for Intelligent Vision Systems (Vol. 7517, pp. 178–189). LNCS. Springer Berlin Heidelberg.
Abstract: In this paper we improve the histogram of oriented gradients (HOG), a core descriptor of state-of-the-art object detection, by the use of higher-level information coming from image segmentation. The idea is to re-weight the descriptor while computing it without increasing its size. The benefits of the proposal are two-fold: (i) to improve the performance of the detector by enriching the descriptor information and (ii) take advantage of the information of image segmentation, which in fact is likely to be used in other stages of the detection system such as candidate generation or refinement.
We test our technique in the INRIA person dataset, which was originally developed to test HOG, embedding it in a human detection system. The well-known segmentation method, mean-shift (from smaller to larger super-pixels), and different methods to re-weight the original descriptor (constant, region-luminance, color or texture-dependent) has been evaluated. We achieve performance improvements of 4:47% in detection rate through the use of differences of color between contour pixel neighborhoods as re-weighting function.
Keywords: Segmentation; Pedestrian Detection
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Jose Manuel Alvarez, Felipe Lumbreras, Antonio Lopez, & Theo Gevers. (2012). Understanding Road Scenes using Visual Cues.
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Muhammad Muzzamil Luqman, Jean-Yves Ramel, & Josep Llados. (2012). Improving Fuzzy Multilevel Graph Embedding through Feature Selection Technique. In Structural, Syntactic, and Statistical Pattern Recognition, Joint IAPR International Workshop (Vol. 7626, pp. 243–253). LNCS. Springer Berlin Heidelberg.
Abstract: Graphs are the most powerful, expressive and convenient data structures but there is a lack of efficient computational tools and algorithms for processing them. The embedding of graphs into numeric vector spaces permits them to access the state-of-the-art computational efficient statistical models and tools. In this paper we take forward our work on explicit graph embedding and present an improvement to our earlier proposed method, named “fuzzy multilevel graph embedding – FMGE”, through feature selection technique. FMGE achieves the embedding of attributed graphs into low dimensional vector spaces by performing a multilevel analysis of graphs and extracting a set of global, structural and elementary level features. Feature selection permits FMGE to select the subset of most discriminating features and to discard the confusing ones for underlying graph dataset. Experimental results for graph classification experimentation on IAM letter, GREC and fingerprint graph databases, show improvement in the performance of FMGE.
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Muhammad Muzzamil Luqman, Thierry Brouard, Jean-Yves Ramel, & Josep Llados. (2012). Recherche de sous-graphes par encapsulation floue des cliques d'ordre 2: Application à la localisation de contenu dans les images de documents graphiques. In Colloque International Francophone sur l'Écrit et le Document (pp. 149–162).
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Bogdan Raducanu, & D. Gatica-Perez. (2012). Inferring competitive role patterns in reality TV show through nonverbal analysis. MTAP - Multimedia Tools and Applications, 56(1), 207–226.
Abstract: This paper introduces a new facet of social media, namely that depicting social interaction. More concretely, we address this problem from the perspective of nonverbal behavior-based analysis of competitive meetings. For our study, we made use of “The Apprentice” reality TV show, which features a competition for a real, highly paid corporate job. Our analysis is centered around two tasks regarding a person's role in a meeting: predicting the person with the highest status, and predicting the fired candidates. We address this problem by adopting both supervised and unsupervised strategies. The current study was carried out using nonverbal audio cues. Our approach is based only on the nonverbal interaction dynamics during the meeting without relying on the spoken words. The analysis is based on two types of data: individual and relational measures. Results obtained from the analysis of a full season of the show are promising (up to 85.7% of accuracy in the first case and up to 92.8% in the second case). Our approach has been conveniently compared with the Influence Model, demonstrating its superiority.
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R. de Nijs, Sebastian Ramos, Gemma Roig, Xavier Boix, Luc Van Gool, & K. Kühnlenz. (2012). On-line Semantic Perception Using Uncertainty. In International Conference on Intelligent Robots and Systems (pp. 4185–4191).
Abstract: Visual perception capabilities are still highly unreliable in unconstrained settings, and solutions might not beaccurate in all regions of an image. Awareness of the uncertainty of perception is a fundamental requirement for proper high level decision making in a robotic system. Yet, the uncertainty measure is often sacrificed to account for dependencies between object/region classifiers. This is the case of Conditional Random Fields (CRFs), the success of which stems from their ability to infer the most likely world configuration, but they do not directly allow to estimate the uncertainty of the solution. In this paper, we consider the setting of assigning semantic labels to the pixels of an image sequence. Instead of using a CRF, we employ a Perturb-and-MAP Random Field, a recently introduced probabilistic model that allows performing fast approximate sampling from its probability density function. This allows to effectively compute the uncertainty of the solution, indicating the reliability of the most likely labeling in each region of the image. We report results on the CamVid dataset, a standard benchmark for semantic labeling of urban image sequences. In our experiments, we show the benefits of exploiting the uncertainty by putting more computational effort on the regions of the image that are less reliable, and use more efficient techniques for other regions, showing little decrease of performance
Keywords: Semantic Segmentation
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Francesc Carreras, Jaume Garcia, Debora Gil, Sandra Pujadas, Chi ho Lion, R.Suarez-Arias, et al. (2012). Left ventricular torsion and longitudinal shortening: two fundamental components of myocardial mechanics assessed by tagged cine-MRI in normal subjects. IJCI - International Journal of Cardiovascular Imaging, 28(2), 273–284.
Abstract: Cardiac magnetic resonance imaging (Cardiac MRI) has become a gold standard diagnostic technique for the assessment of cardiac mechanics, allowing the non-invasive calculation of left ventric- ular long axis longitudinal shortening (LVLS) and absolute myocardial torsion (AMT) between basal and apical left ventricular slices, a movement directly related to the helicoidal anatomic disposition of the myocardial fibers. The aim of this study is to determine AMT and LVLS behaviour and normal values from a group of healthy subjects. A group of 21 healthy volunteers (15 males) (age: 23–55 y.o., mean:30.7 ± 7.5) were prospectively included in an obser- vational study by Cardiac MRI. Left ventricular rotation (degrees) was calculated by custom-made software (Harmonic Phase Flow) in consecutive LV short axis planes tagged cine-MRI sequences. AMT was determined from the difference between basal and apical planes LV rotations. LVLS (%) was determined from the LV longitudinal and horizontal axis cine-MRI images. All the 21 cases studied were interpretable, although in three cases the value of the LV apical rotation could not be determined. The mean rotation of the basal and apical planes at end-systole were -3.71° ± 0.84° and 6.73° ± 1.69° (n:18) respectively, resulting in a LV mean AMT of 10.48° ± 1.63° (n:18). End-systolic mean LVLS was 19.07 ± 2.71%. Cardiac MRI allows for the calculation of AMT and LVLS, fundamental functional components of the ventricular twist mechanics conditioned, in turn, by the anatomical helical layout of the myocardial fibers. These values provide complementary information about systolic ventricular function in relation to the traditional parameters used in daily practice.
Keywords: Magnetic resonance imaging (MRI); Tagging MRI; Cardiac mechanics; Ventricular torsion
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