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Author Jaume Garcia; Debora Gil; Aura Hernandez-Sabate
Title Endowing Canonical Geometries to Cardiac Structures Type Book Chapter
Year 2010 Publication Statistical Atlases And Computational Models Of The Heart Abbreviated Journal
Volume 6364 Issue Pages 124-133
Keywords (down)
Abstract International conference on Cardiac electrophysiological simulation challenge
In this paper, we show that canonical (shape-based) geometries can be endowed to cardiac structures using tubular coordinates defined over their medial axis. We give an analytic formulation of these geometries by means of B-Splines. Since B-Splines present vector space structure PCA can be applied to their control points and statistical models relating boundaries and the interior of the anatomical structures can be derived. We demonstrate the applicability in two cardiac structures, the 3D Left Ventricular volume, and the 2D Left-Right ventricle set in 2D Short Axis view.
Address
Corporate Author Thesis
Publisher Springer Berlin / Heidelberg Place of Publication Editor Camara, O.; Pop, M.; Rhode, K.; Sermesant, M.; Smith, N.; Young, A.
Language Summary Language Original Title
Series Editor Series Title Lecture Notes in Computer Science Abbreviated Series Title LNCS
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM Approved no
Call Number IAM @ iam @ GGH2010b Serial 1515
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Author M. Gomez; J. Mauri; Eduard Fernandez-Nofrerias; Oriol Rodriguez-Leor; Carme Julia; Debora Gil; Petia Radeva
Title Reconstrucción de un modelo espacio-temporal de la luz del vaso a partir de secuencias de ecografía intracoronaria Type Conference Article
Year 2002 Publication XXXVIII Congreso Nacional de la Sociedad Española de Cardiología. Abbreviated Journal
Volume Issue Pages
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Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM;ADAS;MILAB Approved no
Call Number IAM @ iam @ GMF2002d Serial 1516
Permanent link to this record
 
 
Author Debora Gil
Title Geometric Differential Operators for Shape Modelling Type Book Whole
Year 2004 Publication PhD Thesis, Universitat Autonoma de Barcelona-CVC Abbreviated Journal
Volume Issue Pages
Keywords (down)
Abstract Medical imaging feeds research in many computer vision and image processing fields: image filtering, segmentation, shape recovery, registration, retrieval and pattern matching. Because of their low contrast changes and large variety of artifacts and noise, medical imaging processing techniques relying on an analysis of the geometry of image level sets rather than on intensity values result in more robust treatment. From the starting point of treatment of intravascular images, this PhD thesis ad- dresses the design of differential image operators based on geometric principles for a robust shape modelling and restoration. Among all fields applying shape recovery, we approach filtering and segmentation of image objects. For a successful use in real images, the segmentation process should go through three stages: noise removing, shape modelling and shape recovery. This PhD addresses all three topics, but for the sake of algorithms as automated as possible, techniques for image processing will be designed to satisfy three main principles: a) convergence of the iterative schemes to non-trivial states avoiding image degeneration to a constant image and representing smooth models of the originals; b) smooth asymptotic behav- ior ensuring stabilization of the iterative process; c) fixed parameter values ensuring equal (domain free) performance of the algorithms whatever initial images/shapes. Our geometric approach to the generic equations that model the different processes approached enables defining techniques satisfying all the former requirements. First, we introduce a new curvature-based geometric flow for image filtering achieving a good compromise between noise removing and resemblance to original images. Sec- ond, we describe a new family of diffusion operators that restrict their scope to image level curves and serve to restore smooth closed models from unconnected sets of points. Finally, we design a regularization of snake (distance) maps that ensures its smooth convergence towards any closed shape. Experiments show that performance of the techniques proposed overpasses that of state-of-the-art algorithms.
Address
Corporate Author Thesis Ph.D. thesis
Publisher Ediciones Graficas Rey Place of Publication Barcelona (Spain) Editor Jordi Saludes i Closa;Petia Radeva
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 84-933652-0-3 Medium prit
Area Expedition Conference
Notes IAM; Approved no
Call Number IAM @ iam @ GIL2004 Serial 1517
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Author Debora Gil
Title Regularized Curvature Flow Type Report
Year 2002 Publication CVC Technical Report Abbreviated Journal
Volume Issue 63 Pages
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Abstract
Address
Corporate Author Thesis
Publisher Computer Vision Centre Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM; Approved no
Call Number IAM @ iam @ Gil2002 Serial 1518
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Author Debora Gil; Jaume Garcia; Aura Hernandez-Sabate; Enric Marti
Title Manifold parametrization of the left ventricle for a statistical modelling of its complete anatomy Type Conference Article
Year 2010 Publication 8th Medical Imaging Abbreviated Journal
Volume 7623 Issue 762304 Pages 304
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Abstract Distortion of Left Ventricle (LV) external anatomy is related to some dysfunctions, such as hypertrophy. The architecture of myocardial fibers determines LV electromechanical activation patterns as well as mechanics. Thus, their joined modelling would allow the design of specific interventions (such as peacemaker implantation and LV remodelling) and therapies (such as resynchronization). On one hand, accurate modelling of external anatomy requires either a dense sampling or a continuous infinite dimensional approach, which requires non-Euclidean statistics. On the other hand, computation of fiber models requires statistics on Riemannian spaces. Most approaches compute separate statistical models for external anatomy and fibers architecture. In this work we propose a general mathematical framework based on differential geometry concepts for computing a statistical model including, both, external and fiber anatomy. Our framework provides a continuous approach to external anatomy supporting standard statistics. We also provide a straightforward formula for the computation of the Riemannian fiber statistics. We have applied our methodology to the computation of complete anatomical atlas of canine hearts from diffusion tensor studies. The orientation of fibers over the average external geometry agrees with the segmental description of orientations reported in the literature.
Address
Corporate Author Thesis
Publisher SPIE Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference SPIE
Notes IAM Approved no
Call Number IAM @ iam @ GGH2010a Serial 1522
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Author Debora Gil; Petia Radeva
Title Inhibition of false landmarks Type Journal Article
Year 2006 Publication Pattern Recognition Letters Abbreviated Journal PRL
Volume 27 Issue 9 Pages 1022-1030
Keywords (down)
Abstract Corners and junctions are landmarks characterized by the lack of differentiability in the unit tangent to the image level curve. Detectors based on differential operators are not, by their own definition, the best posed as they require a higher degree of differentiability to yield a reliable response. We argue that a corner detector should be based on the degree of continuity of the tangent vector to the image level sets, work on the image domain and need no assumptions on neither the image local structure nor the particular geometry of the corner/junction. An operator measuring the degree of differentiability of the projection matrix on the image gradient fulfills the above requirements. Because using smoothing kernels leads to corner misplacement, we suggest an alternative fake response remover based on the receptive field inhibition of spurious details. The combination of both orientation discontinuity detection and noise inhibition produce our inhibition orientation energy (IOE) landmark locator.
Address
Corporate Author Thesis
Publisher Elsevier Science Inc. Place of Publication New York, NY, USA Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0167-8655 ISBN Medium
Area Expedition Conference
Notes IAM;MILAB Approved no
Call Number IAM @ iam @ GiR2006 Serial 1529
Permanent link to this record
 
 
Author Debora Gil; Petia Radeva
Title Shape Restoration via a Regularized Curvature Flow Type Journal Article
Year 2004 Publication Journal of Mathematical Imaging and Vision Abbreviated Journal
Volume 21 Issue 3 Pages 205-223
Keywords (down)
Abstract Any image filtering operator designed for automatic shape restoration should satisfy robustness (whatever the nature and degree of noise is) as well as non-trivial smooth asymptotic behavior. Moreover, a stopping criterion should be determined by characteristics of the evolved image rather than dependent on the number of iterations. Among the several PDE based techniques, curvature flows appear to be highly reliable for strongly noisy images compared to image diffusion processes.
In the present paper, we introduce a regularized curvature flow (RCF) that admits non-trivial steady states. It is based on a measure of the local curve smoothness that takes into account regularity of the curve curvature and serves as stopping term in the mean curvature flow. We prove that this measure decreases over the orbits of RCF, which endows the method with a natural stop criterion in terms of the magnitude of this measure. Further, in its discrete version it produces steady states consisting of piece-wise regular curves. Numerical experiments made on synthetic shapes corrupted with different kinds of noise show the abilities and limitations of each of the current geometric flows and the benefits of RCF. Finally, we present results on real images that illustrate the usefulness of the present approach in practical applications.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM;MILAB Approved no
Call Number IAM @ iam @ GiR2004c Serial 1532
Permanent link to this record
 
 
Author Debora Gil; Petia Radeva
Title Inhibition of False Landmarks Type Book Chapter
Year 2004 Publication Recent Advances in Artificial Intelligence Research and Development Abbreviated Journal
Volume Issue Pages 233-244
Keywords (down)
Abstract We argue that a corner detector should be based on the degree of continuity of the tangent vector to the image level sets, work on the image domain and need no assumptions on neither the image local structure nor the particular geometry of the corner/junction. An operator measuring the degree of differentiability of the projection matrix on the image gradient fulfills the above requirements. Its high sensitivity to changes in vector directions makes it suitable for landmark location in real images prone to need smoothing to reduce the impact of noise. Because using smoothing kernels leads to corner misplacement, we suggest an alternative fake response remover based on the receptive field inhibition of spurious details. The combination of both orientation discontinuity detection and noise inhibition produce our Inhibition Orientation Energy (IOE) landmark locator.
Address
Corporate Author Thesis
Publisher IOS Press Place of Publication Barcelona (Spain) Editor al, J.V. et
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM;MILAB Approved no
Call Number IAM @ iam @ GiR2004a Serial 1533
Permanent link to this record
 
 
Author Debora Gil; Petia Radeva
Title Curvature based Distance Maps Type Report
Year 2003 Publication CVC Technical Report Abbreviated Journal
Volume Issue 70 Pages
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Abstract
Address
Corporate Author Thesis
Publisher Computer Vision Center Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM;MILAB Approved no
Call Number IAM @ iam @ GIR2003a Serial 1534
Permanent link to this record
 
 
Author Debora Gil; Petia Radeva; J. Mauri
Title Ivus Segmentation Via a Regularized Curvature Flow Type Conference Article
Year 2002 Publication X Congreso Anual de la Sociedad Española de Ingeniería Biomédica CASEIB 2002 Abbreviated Journal
Volume Issue Pages 133-136
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Abstract Cardiac diseases are diagnosed and treated through a study of the morphology and dynamics of cardiac arteries. In- travascular Ultrasound (IVUS) imaging is of high interest to physicians since it provides both information. At the current state-of-the-art in image segmentation, a robust detection of the arterial lumen in IVUS demands manual intervention or ECG-gating. Manual intervention is a tedious and time consuming task that requires experienced observers, meanwhile ECG-gating is an acquisition technique not available in all clinical centers. We introduce a parametric algorithm that detects the arterial luminal border in in vivo sequences. The method consist in smoothing the sequences’ level surfaces under a regularized mean curvature flow that admits non-trivial steady states. The flow is based on a measure of the surface local smoothness that takes into account regularity of the surface curvature.
Address
Corporate Author Thesis
Publisher Place of Publication Saragossa, Espanya Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM;MILAB Approved no
Call Number IAM @ iam @ GRM2002 Serial 1536
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Author Debora Gil; Petia Radeva; Jordi Saludes; J. Mauri
Title Automatic Segmentation of Artery Wall in Coronary IVUS Images: A Probabilistic Approach Type Conference Article
Year 2000 Publication International Conference on Pattern Recognition Abbreviated Journal
Volume 4 Issue Pages 352-355
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Abstract Intravascular ultrasound images represent a unique tool to analyze the morphology of arteries and vessels (plaques, restenosis, etc). The poor quality of these images makes unsupervised segmentation based on traditional segmentation algorithms (such as edge or ridge/valley detection) fail to achieve the expected results. In this paper we present a probabilistic flexible template to separate different regions in the image. In particular, we use elliptic templates to model and detect the shape of the vessel inner wall in IVUS images. We present the results of successful segmentation obtained from patients undergoing stent treatment. A physician team has validated these results.
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM;MILAB Approved no
Call Number IAM @ iam @ GRS2000a Serial 1537
Permanent link to this record
 
 
Author Debora Gil; Petia Radeva; Jordi Saludes; J. Mauri
Title Automatic Segmentation of Artery Wall in Coronary IVUS Images: a Probabilistic Approach Type Conference Article
Year 2000 Publication Proceedings of CIC’2000 Abbreviated Journal
Volume Issue Pages
Keywords (down)
Abstract Intravascular ultrasound images represent a unique tool to analyze the morphology of arteries and vessels (plaques, restenosis, etc). The poor quality of these images makes unsupervised segmentation based on traditional segmentation algorithms (such as edge or ridge/valley detection) fail to achieve the expected results. In this paper we present a probabilistic flexible template to separate different regions in the image. In particular, we use elliptic templates to model and detect the shape of the vessel inner wall in IVUS images. We present the results of successful segmentation obtained from patients undergoing stent treatment. A physician team has validated these results.
Address
Corporate Author Thesis
Publisher Place of Publication Cambridge, Massachussets Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference CIC
Notes IAM;MILAB Approved no
Call Number IAM @ iam @ GRS2000 Serial 1538
Permanent link to this record
 
 
Author Debora Gil; Petia Radeva; Fernando Vilariño
Title Anisotropic Contour Completion Type Conference Article
Year 2003 Publication Proceedings of the IEEE International Conference on Image Processing Abbreviated Journal
Volume Issue Pages
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Abstract In this paper we introduce a novel application of the diffusion tensor for anisotropic image processing. The Anisotropic Contour Completion (ACC) we suggest consists in extending the characteristic function of the open curve by means of a degenerated diffusion tensor that prevents any diffusion in the normal direction. We show that ACC is equivalent to a dilation with a continuous elliptic structural element that takes into account the local orientation of the contours to be closed. Experiments on contours extracted from real images show that ACC produces shapes able to adapt to any curve in an active contour framework. 1.
Address
Corporate Author Thesis
Publisher Place of Publication Barcelona, Spain Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 0-7803-7751-6 Medium
Area Expedition Conference
Notes IAM;MV;MILAB;SIAI Approved no
Call Number IAM @ iam @ GRV2003 Serial 1539
Permanent link to this record
 
 
Author Aura Hernandez-Sabate
Title Exploring Arterial Dynamics and Structures in IntraVascular Ultrasound Sequences Type Book Whole
Year 2009 Publication PhD Thesis, Universitat Autonoma de Barcelona-CVC Abbreviated Journal
Volume Issue Pages
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Abstract Cardiovascular diseases are a leading cause of death in developed countries. Most of them are caused by arterial (specially coronary) diseases, mainly caused by plaque accumulation. Such pathology narrows blood flow (stenosis) and affects artery bio- mechanical elastic properties (atherosclerosis). In the last decades, IntraVascular UltraSound (IVUS) has become a usual imaging technique for the diagnosis and follow up of arterial diseases. IVUS is a catheter-based imaging technique which shows a sequence of cross sections of the artery under study. Inspection of a single image gives information about the percentage of stenosis. Meanwhile, inspection of longitudinal views provides information about artery bio-mechanical properties, which can prevent a fatal outcome of the cardiovascular disease. On one hand, dynamics of arteries (due to heart pumping among others) is a major artifact for exploring tissue bio-mechanical properties. On the other one, manual stenosis measurements require a manual tracing of vessel borders, which is a time-consuming task and might suffer from inter-observer variations. This PhD thesis proposes several image processing tools for exploring vessel dy- namics and structures. We present a physics-based model to extract, analyze and correct vessel in-plane rigid dynamics and to retrieve cardiac phase. Furthermore, we introduce a deterministic-statistical method for automatic vessel borders detection. In particular, we address adventitia layer segmentation. An accurate validation pro- tocol to ensure reliable clinical applicability of the methods is a crucial step in any proposal of an algorithm. In this thesis we take special care in designing a valida- tion protocol for each approach proposed and we contribute to the in vivo dynamics validation with a quantitative and objective score to measure the amount of motion suppressed.
Address
Corporate Author Thesis Ph.D. thesis
Publisher Ediciones Graficas Rey Place of Publication Editor Debora Gil
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 978-84-937261-6-4 Medium
Area Expedition Conference
Notes IAM; Approved no
Call Number IAM @ iam @ Her2009 Serial 1543
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Author Aura Hernandez-Sabate
Title Automatic adventitia segmentation in IntraVascular UltraSound images Type Report
Year 2005 Publication CVC Technical Report Abbreviated Journal
Volume Issue 85 Pages
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Abstract A usual tool in cardiac disease diagnosis is vessel plaque assessment by analysis of IVUS sequences. Manual detection of lumen-intima, intima-media and media-adventitia vessel borders is the main activity of physicians in the process of plaque quantification. Large variety in vessel border descriptors, as well as, shades, artifacts and blurred response due to ultrasound physical properties troubles automated media-adventitia segmentation. This experimental work presents a solution to such a complex problem. The process blends advanced anisotropic filtering operators and statistic classification techniques, achieving an efficient vessel border modelling strategy. First of all, we introduce the theoretic base of the method. After that, we show the steps of the algorithm, validating the method with statistics that show that the media-adventitia border detection achieves an accuracy in the range of inter-observer variability regardless of plaque nature, vessel geometry and incomplete vessel borders. Finally, we present a little Matlab application to the automatic media-adventitia border.
Address
Corporate Author Thesis Master's thesis
Publisher Place of Publication 08193 Bellaterra, Barcelona (Spain) Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes IAM; Approved no
Call Number IAM @ iam @ Her2005 Serial 1544
Permanent link to this record