Fosca De Iorio, Carolina Malagelada, Fernando Azpiroz, M. Maluenda, C. Violanti, Laura Igual, et al. (2009). Intestinal motor activity, endoluminal motion and transit. NEUMOT - Neurogastroenterology & Motility, 21(12), 1264–e119.
Abstract: A programme for evaluation of intestinal motility has been recently developed based on endoluminal image analysis using computer vision methodology and machine learning techniques. Our aim was to determine the effect of intestinal muscle inhibition on wall motion, dynamics of luminal content and transit in the small bowel. Fourteen healthy subjects ingested the endoscopic capsule (Pillcam, Given Imaging) in fasting conditions. Seven of them received glucagon (4.8 microg kg(-1) bolus followed by a 9.6 microg kg(-1) h(-1) infusion during 1 h) and in the other seven, fasting activity was recorded, as controls. This dose of glucagon has previously shown to inhibit both tonic and phasic intestinal motor activity. Endoluminal image and displacement was analyzed by means of a computer vision programme specifically developed for the evaluation of muscular activity (contractile and non-contractile patterns), intestinal contents, endoluminal motion and transit. Thirty-minute periods before, during and after glucagon infusion were analyzed and compared with equivalent periods in controls. No differences were found in the parameters measured during the baseline (pretest) periods when comparing glucagon and control experiments. During glucagon infusion, there was a significant reduction in contractile activity (0.2 +/- 0.1 vs 4.2 +/- 0.9 luminal closures per min, P < 0.05; 0.4 +/- 0.1 vs 3.4 +/- 1.2% of images with radial wrinkles, P < 0.05) and a significant reduction of endoluminal motion (82 +/- 9 vs 21 +/- 10% of static images, P < 0.05). Endoluminal image analysis, by means of computer vision and machine learning techniques, can reliably detect reduced intestinal muscle activity and motion.
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Oriol Pujol, & David Masip. (2009). Geometry-Based Ensembles: Toward a Structural Characterization of the Classification Boundary. TPAMI - IEEE Transactions on Pattern Analysis and Machine Intelligence, 31(6), 1140–1146.
Abstract: This article introduces a novel binary discriminative learning technique based on the approximation of the non-linear decision boundary by a piece-wise linear smooth additive model. The decision border is geometrically defined by means of the characterizing boundary points – points that belong to the optimal boundary under a certain notion of robustness. Based on these points, a set of locally robust linear classifiers is defined and assembled by means of a Tikhonov regularized optimization procedure in an additive model to create a final lambda-smooth decision rule. As a result, a very simple and robust classifier with a strong geometrical meaning and non-linear behavior is obtained. The simplicity of the method allows its extension to cope with some of nowadays machine learning challenges, such as online learning, large scale learning or parallelization, with linear computational complexity. We validate our approach on the UCI database. Finally, we apply our technique in online and large scale scenarios, and in six real life computer vision and pattern recognition problems: gender recognition, intravascular ultrasound tissue classification, speed traffic sign detection, Chagas' disease severity detection, clef classification and action recognition using a 3D accelerometer data. The results are promising and this paper opens a line of research that deserves further attention
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Eduard Vazquez, Theo Gevers, M. Lucassen, Joost Van de Weijer, & Ramon Baldrich. (2010). Saliency of Color Image Derivatives: A Comparison between Computational Models and Human Perception. JOSA A - Journal of the Optical Society of America A, 27(3), 613–621.
Abstract: In this paper, computational methods are proposed to compute color edge saliency based on the information content of color edges. The computational methods are evaluated on bottom-up saliency in a psychophysical experiment, and on a more complex task of salient object detection in real-world images. The psychophysical experiment demonstrates the relevance of using information theory as a saliency processing model and that the proposed methods are significantly better in predicting color saliency (with a human-method correspondence up to 74.75% and an observer agreement of 86.8%) than state-of-the-art models. Furthermore, results from salient object detection confirm that an early fusion of color and contrast provide accurate performance to compute visual saliency with a hit rate up to 95.2%.
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O. Fors, J. Nuñez, Xavier Otazu, A. Prades, & Robert D. Cardinal. (2010). Improving the Ability of Image Sensors to Detect Faint Stars and Moving Objects Using Image Deconvolution Techniques. SENS - Sensors, 10(3), 1743–1752.
Abstract: Abstract: In this paper we show how the techniques of image deconvolution can increase the ability of image sensors as, for example, CCD imagers, to detect faint stars or faint orbital objects (small satellites and space debris). In the case of faint stars, we show that this benefit is equivalent to double the quantum efficiency of the used image sensor or to increase the effective telescope aperture by more than 30% without decreasing the astrometric precision or introducing artificial bias. In the case of orbital objects, the deconvolution technique can double the signal-to-noise ratio of the image, which helps to discover and control dangerous objects as space debris or lost satellites. The benefits obtained using CCD detectors can be extrapolated to any kind of image sensors.
Keywords: image processing; image deconvolution; faint stars; space debris; wavelet transform
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David Rotger, Petia Radeva, & N. Bruining. (2010). Automatic Detection of Bioabsorbable Coronary Stents in IVUS Images using a Cascade of Classifiers. TITB - IEEE Transactions on Information Technology in Biomedicine, 14(2), 535 – 537.
Abstract: Bioabsorbable drug-eluting coronary stents present a very promising improvement to the common metallic ones solving some of the most important problems of stent implantation: the late restenosis. These stents made of poly-L-lactic acid cause a very subtle acoustic shadow (compared to the metallic ones) making difficult the automatic detection and measurements in images. In this paper, we propose a novel approach based on a cascade of GentleBoost classifiers to detect the stent struts using structural features to code the information of the different subregions of the struts. A stochastic gradient descent method is applied to optimize the overall performance of the detector. Validation results of struts detection are very encouraging with an average F-measure of 81%.
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Jose Antonio Rodriguez, Florent Perronnin, Gemma Sanchez, & Josep Llados. (2010). Unsupervised writer adaptation of whole-word HMMs with application to word-spotting. PRL - Pattern Recognition Letters, 31(8), 742–749.
Abstract: In this paper we propose a novel approach for writer adaptation in a handwritten word-spotting task. The method exploits the fact that the semi-continuous hidden Markov model separates the word model parameters into (i) a codebook of shapes and (ii) a set of word-specific parameters.
Our main contribution is to employ this property to derive writer-specific word models by statistically adapting an initial universal codebook to each document. This process is unsupervised and does not even require the appearance of the keyword(s) in the searched document. Experimental results show an increase in performance when this adaptation technique is applied. To the best of our knowledge, this is the first work dealing with adaptation for word-spotting. The preliminary version of this paper obtained an IBM Best Student Paper Award at the 19th International Conference on Pattern Recognition.
Keywords: Word-spotting; Handwriting recognition; Writer adaptation; Hidden Markov model; Document analysis
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Miquel Ferrer, Ernest Valveny, F. Serratosa, K. Riesen, & Horst Bunke. (2010). Generalized Median Graph Computation by Means of Graph Embedding in Vector Spaces. PR - Pattern Recognition, 43(4), 1642–1655.
Abstract: The median graph has been presented as a useful tool to represent a set of graphs. Nevertheless its computation is very complex and the existing algorithms are restricted to use limited amount of data. In this paper we propose a new approach for the computation of the median graph based on graph embedding. Graphs are embedded into a vector space and the median is computed in the vector domain. We have designed a procedure based on the weighted mean of a pair of graphs to go from the vector domain back to the graph domain in order to obtain a final approximation of the median graph. Experiments on three different databases containing large graphs show that we succeed to compute good approximations of the median graph. We have also applied the median graph to perform some basic classification tasks achieving reasonable good results. These experiments on real data open the door to the application of the median graph to a number of more complex machine learning algorithms where a representative of a set of graphs is needed.
Keywords: Graph matching; Weighted mean of graphs; Median graph; Graph embedding; Vector spaces
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Simone Balocco, O. Basset, G. Courbebaisse, E. Boni, Alejandro F. Frangi, P. Tortoli, et al. (2010). Estimation Of Viscoelastic Properties Of Vessel Walls Using a Computational Model and Doppler Ultrasound. PMB - Physics in Medicine and Biology, 55(12), 3557–3575.
Abstract: Human arteries affected by atherosclerosis are characterized by altered wall viscoelastic properties. The possibility of noninvasively assessing arterial viscoelasticity in vivo would significantly contribute to the early diagnosis and prevention of this disease. This paper presents a noniterative technique to estimate the viscoelastic parameters of a vascular wall Zener model. The approach requires the simultaneous measurement of flow variations and wall displacements, which can be provided by suitable ultrasound Doppler instruments. Viscoelastic parameters are estimated by fitting the theoretical constitutive equations to the experimental measurements using an ARMA parameter approach. The accuracy and sensitivity of the proposed method are tested using reference data generated by numerical simulations of arterial pulsation in which the physiological conditions and the viscoelastic parameters of the model can be suitably varied. The estimated values quantitatively agree with the reference values, showing that the only parameter affected by changing the physiological conditions is viscosity, whose relative error was about 27% even when a poor signal-to-noise ratio is simulated. Finally, the feasibility of the method is illustrated through three measurements made at different flow regimes on a cylindrical vessel phantom, yielding a parameter mean estimation error of 25%.
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Simone Balocco, O. Camara, E. Vivas, T. Sola, L. Guimaraens, H. A. van Andel, et al. (2010). Feasibility of Estimating Regional Mechanical Properties of Cerebral Aneurysms In Vivo. MEDPHYS - Medical Physics, 37(4), 1689–1706.
Abstract: PURPOSE:
In this article, the authors studied the feasibility of estimating regional mechanical properties in cerebral aneurysms, integrating information extracted from imaging and physiological data with generic computational models of the arterial wall behavior.
METHODS:
A data assimilation framework was developed to incorporate patient-specific geometries into a given biomechanical model, whereas wall motion estimates were obtained from applying registration techniques to a pair of simulated MR images and guided the mechanical parameter estimation. A simple incompressible linear and isotropic Hookean model coupled with computational fluid-dynamics was employed as a first approximation for computational purposes. Additionally, an automatic clustering technique was developed to reduce the number of parameters to assimilate at the optimization stage and it considerably accelerated the convergence of the simulations. Several in silico experiments were designed to assess the influence of aneurysm geometrical characteristics and the accuracy of wall motion estimates on the mechanical property estimates. Hence, the proposed methodology was applied to six real cerebral aneurysms and tested against a varying number of regions with different elasticity, different mesh discretization, imaging resolution, and registration configurations.
RESULTS:
Several in silico experiments were conducted to investigate the feasibility of the proposed workflow, results found suggesting that the estimation of the mechanical properties was mainly influenced by the image spatial resolution and the chosen registration configuration. According to the in silico experiments, the minimal spatial resolution needed to extract wall pulsation measurements with enough accuracy to guide the proposed data assimilation framework was of 0.1 mm.
CONCLUSIONS:
Current routine imaging modalities do not have such a high spatial resolution and therefore the proposed data assimilation framework cannot currently be used on in vivo data to reliably estimate regional properties in cerebral aneurysms. Besides, it was observed that the incorporation of fluid-structure interaction in a biomechanical model with linear and isotropic material properties did not have a substantial influence in the final results.
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Simone Balocco, Carlo Gatta, Oriol Pujol, J. Mauri, & Petia Radeva. (2010). SRBF: Speckle Reducing Bilateral Filtering. UMB - Ultrasound in Medicine and Biology, 36(8), 1353–1363.
Abstract: Speckle noise negatively affects medical ultrasound image shape interpretation and boundary detection. Speckle removal filters are widely used to selectively remove speckle noise without destroying important image features to enhance object boundaries. In this article, a fully automatic bilateral filter tailored to ultrasound images is proposed. The edge preservation property is obtained by embedding noise statistics in the filter framework. Consequently, the filter is able to tackle the multiplicative behavior modulating the smoothing strength with respect to local statistics. The in silico experiments clearly showed that the speckle reducing bilateral filter (SRBF) has superior performances to most of the state of the art filtering methods. The filter is tested on 50 in vivo US images and its influence on a segmentation task is quantified. The results using SRBF filtered data sets show a superior performance to using oriented anisotropic diffusion filtered images. This improvement is due to the adaptive support of SRBF and the embedded noise statistics, yielding a more homogeneous smoothing. SRBF results in a fully automatic, fast and flexible algorithm potentially suitable in wide ranges of speckle noise sizes, for different medical applications (IVUS, B-mode, 3-D matrix array US).
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C. Alejandro Parraga, Robert Benavente, & Maria Vanrell. (2010). Towards a general model of colour categorization which considers context. PER - Perception. ECVP Abstract Supplement, 39, 86.
Abstract: In two previous experiments [Parraga et al, 2009 J. of Im. Sci. and Tech 53(3) 031106; Benavente et al,2009 Perception 38 ECVP Supplement, 36] the boundaries of basic colour categories were measured.
In the first experiment, samples were presented in isolation (ie on a dark background) and boundaries were measured using a yes/no paradigm. In the second, subjects adjusted the chromaticity of a sample presented on a random Mondrian background to find the boundary between pairs of adjacent colours.
Results from these experiments showed significant di erences but it was not possible to conclude whether this discrepancy was due to the absence/presence of a colourful background or to the di erences in the paradigms used. In this work, we settle this question by repeating the first experiment (ie samples presented on a dark background) using the second paradigm. A comparison of results shows that
although boundary locations are very similar, boundaries measured in context are significantly di erent(more di use) than those measured in isolation (confirmed by a Student’s t-test analysis on the subject’s answers statistical distributions). In addition, we completed the mapping of colour name space by measuring the boundaries between chromatic colours and the achromatic centre. With these results we
completed our parametric fuzzy-sets model of colour naming space.
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Joan Mas, Josep Llados, Gemma Sanchez, & J.A. Jorge. (2010). A syntactic approach based on distortion-tolerant Adjacency Grammars and a spatial-directed parser to interpret sketched diagrams. PR - Pattern Recognition, 43(12), 4148–4164.
Abstract: This paper presents a syntactic approach based on Adjacency Grammars (AG) for sketch diagram modeling and understanding. Diagrams are a combination of graphical symbols arranged according to a set of spatial rules defined by a visual language. AG describe visual shapes by productions defined in terms of terminal and non-terminal symbols (graphical primitives and subshapes), and a set functions describing the spatial arrangements between symbols. Our approach to sketch diagram understanding provides three main contributions. First, since AG are linear grammars, there is a need to define shapes and relations inherently bidimensional using a sequential formalism. Second, our parsing approach uses an indexing structure based on a spatial tessellation. This serves to reduce the search space when finding candidates to produce a valid reduction. This allows order-free parsing of 2D visual sentences while keeping combinatorial explosion in check. Third, working with sketches requires a distortion model to cope with the natural variations of hand drawn strokes. To this end we extended the basic grammar with a distortion measure modeled on the allowable variation on spatial constraints associated with grammar productions. Finally, the paper reports on an experimental framework an interactive system for sketch analysis. User tests performed on two real scenarios show that our approach is usable in interactive settings.
Keywords: Syntactic Pattern Recognition; Symbol recognition; Diagram understanding; Sketched diagrams; Adjacency Grammars; Incremental parsing; Spatial directed parsing
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Umapada Pal, Partha Pratim Roy, N. Tripathya, & Josep Llados. (2010). Multi-oriented Bangla and Devnagari text recognition. PR - Pattern Recognition, 43(12), 4124–4136.
Abstract: There are printed complex documents where text lines of a single page may have different orientations or the text lines may be curved in shape. As a result, it is difficult to detect the skew of such documents and hence character segmentation and recognition of such documents are a complex task. In this paper, using background and foreground information we propose a novel scheme towards the recognition of Indian complex documents of Bangla and Devnagari script. In Bangla and Devnagari documents usually characters in a word touch and they form cavity regions. To take care of these cavity regions, background information of such documents is used. Convex hull and water reservoir principle have been applied for this purpose. Here, at first, the characters are segmented from the documents using the background information of the text. Next, individual characters are recognized using rotation invariant features obtained from the foreground part of the characters.
For character segmentation, at first, writing mode of a touching component (word) is detected using water reservoir principle based features. Next, depending on writing mode and the reservoir base-region of the touching component, a set of candidate envelope points is then selected from the contour points of the component. Based on these candidate points, the touching component is finally segmented into individual characters. For recognition of multi-sized/multi-oriented characters the features are computed from different angular information obtained from the external and internal contour pixels of the characters. These angular information are computed in such a way that they do not depend on the size and rotation of the characters. Circular and convex hull rings have been used to divide a character into smaller zones to get zone-wise features for higher recognition results. We combine circular and convex hull features to improve the results and these features are fed to support vector machines (SVM) for recognition. From our experiment we obtained recognition results of 99.18% (98.86%) accuracy when tested on 7515 (7874) Devnagari (Bangla) characters.
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Sergio Escalera, Oriol Pujol, & Petia Radeva. (2010). Re-coding ECOCs without retraining. PRL - Pattern Recognition Letters, 31(7), 555–562.
Abstract: A standard way to deal with multi-class categorization problems is by the combination of binary classifiers in a pairwise voting procedure. Recently, this classical approach has been formalized in the Error-Correcting Output Codes (ECOC) framework. In the ECOC framework, the one-versus-one coding demonstrates to achieve higher performance than the rest of coding designs. The binary problems that we train in the one-versus-one strategy are significantly smaller than in the rest of designs, and usually easier to be learnt, taking into account the smaller overlapping between classes. However, a high percentage of the positions coded by zero of the coding matrix, which implies a high sparseness degree, does not codify meta-class membership information. In this paper, we show that using the training data we can redefine without re-training, in a problem-dependent way, the one-versus-one coding matrix so that the new coded information helps the system to increase its generalization capability. Moreover, the new re-coding strategy is generalized to be applied over any binary code. The results over several UCI Machine Learning repository data sets and two real multi-class problems show that performance improvements can be obtained re-coding the classical one-versus-one and Sparse random designs compared to different state-of-the-art ECOC configurations.
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Olivier Penacchio, C. Alejandro Parraga, & Maria Vanrell. (2010). Natural Scene Statistics account for Human Cones Ratios. PER - Perception. ECVP Abstract Supplement, 39, 101.
Abstract: In two previous experiments [Parraga et al, 2009 J. of Im. Sci. and Tech 53(3) 031106; Benavente et al,2009 Perception 38 ECVP Supplement, 36] the boundaries of basic colour categories were measured.
In the first experiment, samples were presented in isolation (ie on a dark background) and boundaries were measured using a yes/no paradigm. In the second, subjects adjusted the chromaticity of a sample presented on a random Mondrian background to find the boundary between pairs of adjacent colours.
Results from these experiments showed significant di erences but it was not possible to conclude whether this discrepancy was due to the absence/presence of a colourful background or to the di erences in the paradigms used. In this work, we settle this question by repeating the first experiment (ie samples presented on a dark background) using the second paradigm. A comparison of results shows that
although boundary locations are very similar, boundaries measured in context are significantly di erent(more di use) than those measured in isolation (confirmed by a Student’s t-test analysis on the subject’s answers statistical distributions). In addition, we completed the mapping of colour name space by measuring the boundaries between chromatic colours and the achromatic centre. With these results we completed our parametric fuzzy-sets model of colour naming space.
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