Jaume Gibert, Ernest Valveny, & Horst Bunke. (2010). Graph of Words Embedding for Molecular Structure-Activity Relationship Analysis. In 15th Iberoamerican Congress on Pattern Recognition (Vol. 6419, 30–37). LNCS.
Abstract: Structure-Activity relationship analysis aims at discovering chemical activity of molecular compounds based on their structure. In this article we make use of a particular graph representation of molecules and propose a new graph embedding procedure to solve the problem of structure-activity relationship analysis. The embedding is essentially an arrangement of a molecule in the form of a vector by considering frequencies of appearing atoms and frequencies of covalent bonds between them. Results on two benchmark databases show the effectiveness of the proposed technique in terms of recognition accuracy while avoiding high operational costs in the transformation.
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Muhammad Anwer Rao, David Vazquez, & Antonio Lopez. (2011). Color Contribution to Part-Based Person Detection in Different Types of Scenarios. In W. Kropatsch A. Berciano H. Molina D. D. P. Real (Ed.), 14th International Conference on Computer Analysis of Images and Patterns (Vol. 6855, pp. 463–470). Berlin Heidelberg: Springer.
Abstract: Camera-based person detection is of paramount interest due to its potential applications. The task is diffcult because the great variety of backgrounds (scenarios, illumination) in which persons are present, as well as their intra-class variability (pose, clothe, occlusion). In fact, the class person is one of the included in the popular PASCAL visual object classes (VOC) challenge. A breakthrough for this challenge, regarding person detection, is due to Felzenszwalb et al. These authors proposed a part-based detector that relies on histograms of oriented gradients (HOG) and latent support vector machines (LatSVM) to learn a model of the whole human body and its constitutive parts, as well as their relative position. Since the approach of Felzenszwalb et al. appeared new variants have been proposed, usually giving rise to more complex models. In this paper, we focus on an issue that has not attracted suficient interest up to now. In particular, we refer to the fact that HOG is usually computed from RGB color space, but other possibilities exist and deserve the corresponding investigation. In this paper we challenge RGB space with the opponent color space (OPP), which is inspired in the human vision system.We will compute the HOG on top of OPP, then we train and test the part-based human classifer by Felzenszwalb et al. using PASCAL VOC challenge protocols and person database. Our experiments demonstrate that OPP outperforms RGB. We also investigate possible differences among types of scenarios: indoor, urban and countryside. Interestingly, our experiments suggest that the beneficts of OPP with respect to RGB mainly come for indoor and countryside scenarios, those in which the human visual system was designed by evolution.
Keywords: Pedestrian Detection; Color
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Debora Gil, Aura Hernandez-Sabate, Mireia Burnat, Steven Jansen, & Jordi Martinez-Vilalta. (2009). Structure-Preserving Smoothing of Biomedical Images. In 13th International Conference on Computer Analysis of Images and Patterns (Vol. 5702, pp. 427–434). LNCS. Springer Berlin Heidelberg.
Abstract: Smoothing of biomedical images should preserve gray-level transitions between adjacent tissues, while restoring contours consistent with anatomical structures. Anisotropic diffusion operators are based on image appearance discontinuities (either local or contextual) and might fail at weak inter-tissue transitions. Meanwhile, the output of block-wise and morphological operations is prone to present a block structure due to the shape and size of the considered pixel neighborhood. In this contribution, we use differential geometry concepts to define a diffusion operator that restricts to image consistent level-sets. In this manner, the final state is a non-uniform intensity image presenting homogeneous inter-tissue transitions along anatomical structures, while smoothing intra-structure texture. Experiments on different types of medical images (magnetic resonance, computerized tomography) illustrate its benefit on a further process (such as segmentation) of images.
Keywords: non-linear smoothing; differential geometry; anatomical structures segmentation; cardiac magnetic resonance; computerized tomography.
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Debora Gil, & Petia Radeva. (2003). Curvature Vector Flow to Assure Convergent Deformable Models for Shape Modelling. In B. Springer (Ed.), Energy Minimization Methods In Computer Vision And Pattern Recognition (Vol. 2683, pp. 357–372). LNCS. Lisbon, PORTUGAL: Springer, Berlin.
Abstract: Poor convergence to concave shapes is a main limitation of snakes as a standard segmentation and shape modelling technique. The gradient of the external energy of the snake represents a force that pushes the snake into concave regions, as its internal energy increases when new inexion points are created. In spite of the improvement of the external energy by the gradient vector ow technique, highly non convex shapes can not be obtained, yet. In the present paper, we develop a new external energy based on the geometry of the curve to be modelled. By tracking back the deformation of a curve that evolves by minimum curvature ow, we construct a distance map that encapsulates the natural way of adapting to non convex shapes. The gradient of this map, which we call curvature vector ow (CVF), is capable of attracting a snake towards any contour, whatever its geometry. Our experiments show that, any initial snake condition converges to the curve to be modelled in optimal time.
Keywords: Initial condition; Convex shape; Non convex analysis; Increase; Segmentation; Gradient; Standard; Standards; Concave shape; Flow models; Tracking; Edge detection; Curvature
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Naveen Onkarappa, & Angel Sappa. (2011). Space Variant Representations for Mobile Platform Vision Applications. In W. Kropatsch A. Berciano H. Molina D. D. P. Real (Ed.), 14th International Conference on Computer Analysis of Images and Patterns (Vol. 6855, pp. 146–154). Springer Berlin Heidelberg.
Abstract: The log-polar space variant representation, motivated by biological vision, has been widely studied in the literature. Its data reduction and invariance properties made it useful in many vision applications. However, due to its nature, it fails in preserving features in the periphery. In the current work, as an attempt to overcome this problem, we propose a novel space-variant representation. It is evaluated and proved to be better than the log-polar representation in preserving the peripheral information, crucial for on-board mobile vision applications. The evaluation is performed by comparing log-polar and the proposed representation once they are used for estimating dense optical flow.
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Mario Rojas, David Masip, & Jordi Vitria. (2011). Automatic Detection of Facial Feature Points via HOGs and Geometric Prior Models. In 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 371–378). Springer Berlin Heidelberg.
Abstract: Most applications dealing with problems involving the face require a robust estimation of the facial salient points. Nevertheless, this estimation is not usually an automated preprocessing step in applications dealing with facial expression recognition. In this paper we present a simple method to detect facial salient points in the face. It is based on a prior Point Distribution Model and a robust object descriptor. The model learns the distribution of the points from the training data, as well as the amount of variation in location each point exhibits. Using this model, we reduce the search areas to look for each point. In addition, we also exploit the global consistency of the points constellation, increasing the detection accuracy. The method was tested on two separate data sets and the results, in some cases, outperform the state of the art.
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Pierluigi Casale, Oriol Pujol, & Petia Radeva. (2011). Human Activity Recognition from Accelerometer Data using a Wearable Device. In J. Vitria, J. M. R. Sanches, & M. Hernández (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 289–296). LNCS. Springer Berlin Heidelberg.
Abstract: Activity Recognition is an emerging field of research, born from the larger fields of ubiquitous computing, context-aware computing and multimedia. Recently, recognizing everyday life activities becomes one of the challenges for pervasive computing. In our work, we developed a novel wearable system easy to use and comfortable to bring. Our wearable system is based on a new set of 20 computationally efficient features and the Random Forest classifier. We obtain very encouraging results with classification accuracy of human activities recognition of up to 94%.
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Anjan Dutta, Josep Llados, & Umapada Pal. (2011). A Bag-of-Paths Based Serialized Subgraph Matching for Symbol Spotting in Line Drawings. In Jordi Vitria, Joao Miguel Raposo, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 620–627). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: In this paper we propose an error tolerant subgraph matching algorithm based on bag-of-paths for solving the problem of symbol spotting in line drawings. Bag-of-paths is a factorized representation of graphs where the factorization is done by considering all the acyclic paths between each pair of connected nodes. Similar paths within the whole collection of documents are clustered and organized in a lookup table for efficient indexing. The lookup table contains the index key of each cluster and the corresponding list of locations as a single entry. The mean path of each of the clusters serves as the index key for each table entry. The spotting method is then formulated by a spatial voting scheme to the list of locations of the paths that are decided in terms of search of similar paths that compose the query symbol. Efficient indexing of common substructures helps to reduce the computational burden of usual graph based methods. The proposed method can also be seen as a way to serialize graphs which allows to reduce the complexity of the subgraph isomorphism. We have encoded the paths in terms of both attributed strings and turning functions, and presented a comparative results between them within the symbol spotting framework. Experimentations for matching different shape silhouettes are also reported and the method has been proved to work in noisy environment also.
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Francesco Ciompi, Oriol Pujol, Carlo Gatta, Xavier Carrillo, Josepa Mauri, & Petia Radeva. (2011). A Holistic Approach for the Detection of Media-Adventitia Border in IVUS. In 14th International Conference on Medical Image Computing and Computer Assisted Intervention (Vol. 6893, pp. 401–408). LNCS. Springer Berlin Heidelberg.
Abstract: In this paper we present a methodology for the automatic detection of media-adventitia border (MAb) in Intravascular Ultrasound. A robust computation of the MAb is achieved through a holistic approach where the position of the MAb with respect to other tissues of the vessel is used. A learned quality measure assures that the resulting MAb is optimal with respect to all other tissues. The mean distance error computed through a set of 140 images is 0.2164 (±0.1326) mm.
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Marina Alberti, Carlo Gatta, Simone Balocco, Francesco Ciompi, Oriol Pujol, Joana Silva, et al. (2011). Automatic Branching Detection in IVUS Sequences. In Jordi Vitria, Joao Miguel Raposo, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 126–133). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: Atherosclerosis is a vascular pathology affecting the arterial walls, generally located in specific vessel sites, such as bifurcations. In this paper, for the first time, a fully automatic approach for the detection of bifurcations in IVUS pullback sequences is presented. The method identifies the frames and the angular sectors in which a bifurcation is visible. This goal is achieved by applying a classifier to a set of textural features extracted from each image of an IVUS pullback. A comparison between two state-of-the-art classifiers is performed, AdaBoost and Random Forest. A cross-validation scheme is applied in order to evaluate the performances of the approaches. The obtained results are encouraging, showing a sensitivity of 75% and an accuracy of 94% by using the AdaBoost algorithm.
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Simone Balocco, Carlo Gatta, Francesco Ciompi, Oriol Pujol, Xavier Carrillo, Josepa Mauri, et al. (2011). Combining Growcut and Temporal Correlation for IVUS Lumen Segmentation. In Jordi Vitria, Joao Miguel Raposo, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 556–563). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: The assessment of arterial luminal area, performed by IVUS analysis, is a clinical index used to evaluate the degree of coronary artery disease. In this paper we propose a novel approach to automatically segment the vessel lumen, which combines model-based temporal information extracted from successive frames of the sequence, with spatial classification using the Growcut algorithm. The performance of the method is evaluated by an in vivo experiment on 300 IVUS frames. The automatic and manual segmentation performances in general vessel and stent frames are comparable. The average segmentation error in vessel, stent and bifurcation frames are 0.17±0.08 mm, 0.18±0.07 mm and 0.31±0.12 mm respectively.
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Nataliya Shapovalova, Wenjuan Gong, Marco Pedersoli, Xavier Roca, & Jordi Gonzalez. (2011). On Importance of Interactions and Context in Human Action Recognition. In and M. Hernandez J. M. S. J. Vitria (Ed.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 58–66). LNCS. Springer Berlin Heidelberg.
Abstract: This paper is focused on the automatic recognition of human events in static images. Popular techniques use knowledge of the human pose for inferring the action, and the most recent approaches tend to combine pose information with either knowledge of the scene or of the objects with which the human interacts. Our approach makes a step forward in this direction by combining the human pose with the scene in which the human is placed, together with the spatial relationships between humans and objects. Based on standard, simple descriptors like HOG and SIFT, recognition performance is enhanced when these three types of knowledge are taken into account. Results obtained in the PASCAL 2010 Action Recognition Dataset demonstrate that our technique reaches state-of-the-art results using simple descriptors and classifiers.
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Carlo Gatta, Simone Balocco, Victoria Martin Yuste, Ruben Leta, & Petia Radeva. (2011). Non-rigid Multi-modal Registration of Coronary Arteries Using SIFTflow. In Jordi Vitria, Joao Miguel Sanches, & Mario Hernandez (Eds.), 5th Iberian Conference on Pattern Recognition and Image Analysis (Vol. 6669, pp. 159–166). LNCS. Berlin: Springer Berlin Heidelberg.
Abstract: The fusion of clinically relevant information coming from different image modalities is an important topic in medical imaging. In particular, different cardiac imaging modalities provides complementary information for the physician: Computer Tomography Angiography (CTA) provides reliable pre-operative information on arteries geometry, even in the presence of chronic total occlusions, while X-Ray Angiography (XRA) allows intra-operative high resolution projections of a specific artery. The non-rigid registration of arteries between these two modalities is a difficult task. In this paper we propose the use of SIFTflow, in registering CTA and XRA images. At the best of our knowledge, this paper proposed SIFTflow as a XRay-CTA registration method for the first time in the literature. To highlight the arteries, so to guide the registration process, the well known Vesselness method has been employed. Results confirm that, to the aim of registration, the arteries must be highlighted and background objects removed as much as possible. Moreover, the comparison with the well known Free Form Deformation technique, suggests that SIFTflow has a great potential in the registration of multi-modal medical images.
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Pierluigi Casale, Oriol Pujol, & Petia Radeva. (2011). Approximate Convex Hulls Family for One-Class Cassification. In Carlo Sansone, Josef Kittler, & Fabio Roli (Eds.), 10th International Workshop on Multiple Classifier Systems (Vol. 6713, pp. 106–115). LNCS. Springer Berlin Heidelberg.
Abstract: In this work, a new method for one-class classification based on the Convex Hull geometric structure is proposed. The new method creates a family of convex hulls able to fit the geometrical shape of the training points. The increased computational cost due to the creation of the convex hull in multiple dimensions is circumvented using random projections. This provides an approximation of the original structure with multiple bi-dimensional views. In the projection planes, a mechanism for noisy points rejection has also been elaborated and evaluated. Results show that the approach performs considerably well with respect to the state the art in one-class classification.
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Xavier Perez Sala, Cecilio Angulo, & Sergio Escalera. (2011). Biologically Inspired Path Execution Using SURF Flow in Robot Navigation. In 11th International Work Conference on Artificial Neural Networks (Vol. II, pp. 581–588). Springer Berlin Heidelberg.
Abstract: An exportable and robust system using only camera images is proposed for path execution in robot navigation. Motion information is extracted in the form of optical flow from SURF robust descriptors of consecutive frames, so the method is called SURF flow. This information is used to correct robot displacement when a straight forward path command is sent to the robot, but it is not really executed due to several robot and environmental concerns. The proposed system has been successfully tested on the legged robot Aibo.
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