Sergio Vera. (2015). Anatomic Registration based on Medial Axis Parametrizations (Debora Gil, & Miguel Angel Gonzalez Ballester, Eds.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Image registration has been for many years the gold standard method to bring two images into correspondence. It has been used extensively in the eld of medical imaging in order to put images of di erent patients into a common overlapping spatial position. However, medical image registration is a slow, iterative optimization process, where many variables and prone to fall into the pit traps local minima.
A coordinate system parameterizing the interior of organs is a powerful tool for a systematic localization of injured tissue. If the same coordinate values are assigned to speci c anatomical sites, parameterizations ensure integration of data across different medical image modalities. Harmonic mappings have been used to produce parametric meshes over the surface of anatomical shapes, given their ability to set values at speci c locations through boundary conditions. However, most of the existing implementations in medical imaging restrict to either anatomical surfaces, or the depth coordinate with boundary conditions is given at discrete sites of limited geometric diversity.
The medial surface of the shape can be used to provide a continuous basis for the de nition of a depth coordinate. However, given that di erent methods for generation of medial surfaces generate di erent manifolds, not all of them are equally suited to be the basis of radial coordinate for a parameterization. It would be desirable that the medial surface will be smooth, and robust to surface shape noise, with low number of spurious branches or surfaces.
In this thesis we present methods for computation of smooth medial manifolds and apply them to the generation of for anatomical volumetric parameterization that extends current harmonic parameterizations to the interior anatomy using information provided by the volume medial surface. This reference system sets a solid base for creating anatomical models of the anatomical shapes, and allows comparing several patients in a common framework of reference.
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Joan M. Nuñez. (2015). Vascular Pattern Characterization in Colonoscopy Images (Fernando Vilariño, Ed.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Colorectal cancer is the third most common cancer worldwide and the second most common malignant tumor in Europe. Screening tests have shown to be very e ective in increasing the survival rates since they allow an early detection of polyps. Among the di erent screening techniques, colonoscopy is considered the gold standard although clinical studies mention several problems that have an impact in the quality of the procedure. The navigation through the rectum and colon track can be challenging for the physicians which can increase polyp miss rates. The thorough visualization of the colon track must be ensured so that
the chances of missing lesions are minimized. The visual analysis of colonoscopy images can provide important information to the physicians and support their navigation during the procedure.
Blood vessels and their branching patterns can provide descriptive power to potentially develop biometric markers. Anatomical markers based on blood vessel patterns could be used to identify a particular scene in colonoscopy videos and to support endoscope navigation by generating a sequence of ordered scenes through the di erent colon sections. By verifying the presence of vascular content in the endoluminal scene it is also possible to certify a proper
inspection of the colon mucosa and to improve polyp localization. Considering the potential uses of blood vessel description, this contribution studies the characterization of the vascular content and the analysis of the descriptive power of its branching patterns.
Blood vessel characterization in colonoscopy images is shown to be a challenging task. The endoluminal scene is conformed by several elements whose similar characteristics hinder the development of particular models for each of them. To overcome such diculties we propose the use of the blood vessel branching characteristics as key features for pattern description. We present a model to characterize junctions in binary patterns. The implementation
of the junction model allows us to develop a junction localization method. We
created two data sets including manually labeled vessel information as well as manual ground truths of two types of keypoint landmarks: junctions and endpoints. The proposed method outperforms the available algorithms in the literature in experiments in both, our newly created colon vessel data set, and in DRIVE retinal fundus image data set. In the latter case, we created a manual ground truth of junction coordinates. Since we want to explore the descriptive potential of junctions and vessels, we propose a graph-based approach to
create anatomical markers. In the context of polyp localization, we present a new method to inhibit the in uence of blood vessels in the extraction valley-pro le information. The results show that our methodology decreases vessel in
uence, increases polyp information and leads to an improvement in state-of-the-art polyp localization performance. We also propose a polyp-speci c segmentation method that outperforms other general and speci c approaches.
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Maedeh Aghaei, Mariella Dimiccoli, & Petia Radeva. (2015). Multi-Face Tracking by Extended Bag-of-Tracklets in Egocentric Videos.
Abstract: Egocentric images offer a hands-free way to record daily experiences and special events, where social interactions are of special interest. A natural question that arises is how to extract and track the appearance of multiple persons in a social event captured by a wearable camera. In this paper, we propose a novel method to find correspondences of multiple-faces in low temporal resolution egocentric sequences acquired through a wearable camera. This kind of sequences imposes additional challenges to the multitracking problem with respect to conventional videos. Due to the free motion of the camera and to its low temporal resolution (2 fpm), abrupt changes in the field of view, in illumination conditions and in the target location are very frequent. To overcome such a difficulty, we propose to generate, for each detected face, a set of correspondences along the whole sequence that we call tracklet and to take advantage of their redundancy to deal with both false positive face detections and unreliable tracklets. Similar tracklets are grouped into the so called extended bag-of-tracklets (eBoT), which are aimed to correspond to specific persons. Finally, a prototype tracklet is extracted for each eBoT. We validated our method over a dataset of 18.000 images from 38 egocentric sequences with 52 trackable persons and compared to the state-of-the-art methods, demonstrating its effectiveness and robustness.
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Carlos David Martinez Hinarejos, Josep Llados, Alicia Fornes, Francisco Casacuberta, Lluis de Las Heras, Joan Mas, et al. (2016). Context, multimodality, and user collaboration in handwritten text processing: the CoMUN-HaT project. In 3rd IberSPEECH.
Abstract: Processing of handwritten documents is a task that is of wide interest for many
purposes, such as those related to preserve cultural heritage. Handwritten text recognition techniques have been successfully applied during the last decade to obtain transcriptions of handwritten documents, and keyword spotting techniques have been applied for searching specific terms in image collections of handwritten documents. However, results on transcription and indexing are far from perfect. In this framework, the use of new data sources arises as a new paradigm that will allow for a better transcription and indexing of handwritten documents. Three main different data sources could be considered: context of the document (style, writer, historical time, topics,. . . ), multimodal data (representations of the document in a different modality, such as the speech signal of the dictation of the text), and user feedback (corrections, amendments,. . . ). The CoMUN-HaT project aims at the integration of these different data sources into the transcription and indexing task for handwritten documents: the use of context derived from the analysis of the documents, how multimodality can aid the recognition process to obtain more accurate transcriptions (including transcription in a modern version of the language), and integration into a userin-the-loop assisted text transcription framework. This will be reflected in the construction of a transcription and indexing platform that can be used by both professional and nonprofessional users, contributing to crowd-sourcing activities to preserve cultural heritage and to obtain an accessible version of the involved corpus.
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Gloria Fernandez Esparrach, Jorge Bernal, Cristina Rodriguez de Miguel, Debora Gil, Fernando Vilariño, Henry Cordova, et al. (2015). Colonic polyps are correctly identified by a computer vision method using wm-dova energy maps. In Proceedings of 23 United European- UEG Week 2015.
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Victor Campmany, Sergio Silva, Juan Carlos Moure, Toni Espinosa, David Vazquez, & Antonio Lopez. (2016). GPU-based pedestrian detection for autonomous driving. In GPU Technology Conference.
Abstract: Pedestrian detection for autonomous driving is one of the hardest tasks within computer vision, and involves huge computational costs. Obtaining acceptable real-time performance, measured in frames per second (fps), for the most advanced algorithms is nowadays a hard challenge. Taking the work in [1] as our baseline, we propose a CUDA implementation of a pedestrian detection system that includes LBP and HOG as feature descriptors and SVM and Random forest as classifiers. We introduce significant algorithmic adjustments and optimizations to adapt the problem to the NVIDIA GPU architecture. The aim is to deploy a real-time system providing reliable results.
Keywords: Pedestrian Detection; GPU
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Daniel Hernandez, Juan Carlos Moure, Toni Espinosa, Alejandro Chacon, David Vazquez, & Antonio Lopez. (2016). Real-time 3D Reconstruction for Autonomous Driving via Semi-Global Matching. In GPU Technology Conference.
Abstract: Robust and dense computation of depth information from stereo-camera systems is a computationally demanding requirement for real-time autonomous driving. Semi-Global Matching (SGM) [1] approximates heavy-computation global algorithms results but with lower computational complexity, therefore it is a good candidate for a real-time implementation. SGM minimizes energy along several 1D paths across the image. The aim of this work is to provide a real-time system producing reliable results on energy-efficient hardware. Our design runs on a NVIDIA Titan X GPU at 104.62 FPS and on a NVIDIA Drive PX at 6.7 FPS, promising for real-time platforms
Keywords: Stereo; Autonomous Driving; GPU; 3d reconstruction
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Marçal Rusiñol, J. Chazalon, & Jean-Marc Ogier. (2016). Filtrage de descripteurs locaux pour l'amélioration de la détection de documents. In Colloque International Francophone sur l'Écrit et le Document.
Abstract: In this paper we propose an effective method aimed at reducing the amount of local descriptors to be indexed in a document matching framework.In an off-line training stage, the matching between the model document and incoming images is computed retaining the local descriptors from the model that steadily produce good matches. We have evaluated this approach by using the ICDAR2015 SmartDOC dataset containing near 25000 images from documents to be captured by a mobile device. We have tested the performance of this filtering step by using ORB and SIFT local detectors and descriptors. The results show an important gain both in quality of the final matching as well as in time and space requirements.
Keywords: Local descriptors; mobile capture; document matching; keypoint selection
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Marc Masana, Joost Van de Weijer, & Andrew Bagdanov. (2016). On-the-fly Network pruning for object detection. In International conference on learning representations.
Abstract: Object detection with deep neural networks is often performed by passing a few
thousand candidate bounding boxes through a deep neural network for each image.
These bounding boxes are highly correlated since they originate from the same
image. In this paper we investigate how to exploit feature occurrence at the image scale to prune the neural network which is subsequently applied to all bounding boxes. We show that removing units which have near-zero activation in the image allows us to significantly reduce the number of parameters in the network. Results on the PASCAL 2007 Object Detection Challenge demonstrate that up to 40% of units in some fully-connected layers can be entirely eliminated with little change in the detection result.
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Ozan Caglayan, Walid Aransa, Yaxing Wang, Marc Masana, Mercedes Garcıa-Martinez, Fethi Bougares, et al. (2016). Does Multimodality Help Human and Machine for Translation and Image Captioning? In 1st conference on machine translation.
Abstract: This paper presents the systems developed by LIUM and CVC for the WMT16 Multimodal Machine Translation challenge. We explored various comparative methods, namely phrase-based systems and attentional recurrent neural networks models trained using monomodal or multimodal data. We also performed a human evaluation in order to estimate theusefulness of multimodal data for human machine translation and image description generation. Our systems obtained the best results for both tasks according to the automatic evaluation metrics BLEU and METEOR.
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Esteve Cervantes, Long Long Yu, Andrew Bagdanov, Marc Masana, & Joost Van de Weijer. (2016). Hierarchical Part Detection with Deep Neural Networks. In 23rd IEEE International Conference on Image Processing.
Abstract: Part detection is an important aspect of object recognition. Most approaches apply object proposals to generate hundreds of possible part bounding box candidates which are then evaluated by part classifiers. Recently several methods have investigated directly regressing to a limited set of bounding boxes from deep neural network representation. However, for object parts such methods may be unfeasible due to their relatively small size with respect to the image. We propose a hierarchical method for object and part detection. In a single network we first detect the object and then regress to part location proposals based only on the feature representation inside the object. Experiments show that our hierarchical approach outperforms a network which directly regresses the part locations. We also show that our approach obtains part detection accuracy comparable or better than state-of-the-art on the CUB-200 bird and Fashionista clothing item datasets with only a fraction of the number of part proposals.
Keywords: Object Recognition; Part Detection; Convolutional Neural Networks
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Muhammad Anwer Rao, Fahad Shahbaz Khan, Joost Van de Weijer, & Jorma Laaksonen. (2016). Combining Holistic and Part-based Deep Representations for Computational Painting Categorization. In 6th International Conference on Multimedia Retrieval.
Abstract: Automatic analysis of visual art, such as paintings, is a challenging inter-disciplinary research problem. Conventional approaches only rely on global scene characteristics by encoding holistic information for computational painting categorization.We argue that such approaches are sub-optimal and that discriminative common visual structures provide complementary information for painting classification. We present an approach that encodes both the global scene layout and discriminative latent common structures for computational painting categorization. The region of interests are automatically extracted, without any manual part labeling, by training class-specific deformable part-based models. Both holistic and region-of-interests are then described using multi-scale dense convolutional features. These features are pooled separately using Fisher vector encoding and concatenated afterwards in a single image representation. Experiments are performed on a challenging dataset with 91 different painters and 13 diverse painting styles. Our approach outperforms the standard method, which only employs the global scene characteristics. Furthermore, our method achieves state-of-the-art results outperforming a recent multi-scale deep features based approach [11] by 6.4% and 3.8% respectively on artist and style classification.
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Jun Wan, Yibing Zhao, Shuai Zhou, Isabelle Guyon, & Sergio Escalera. (2016). ChaLearn Looking at People RGB-D Isolated and Continuous Datasets for Gesture Recognition. In 29th IEEE Conference on Computer Vision and Pattern Recognition Worshops.
Abstract: In this paper, we present two large video multi-modal datasets for RGB and RGB-D gesture recognition: the ChaLearn LAP RGB-D Isolated Gesture Dataset (IsoGD)and the Continuous Gesture Dataset (ConGD). Both datasets are derived from the ChaLearn Gesture Dataset
(CGD) that has a total of more than 50000 gestures for the “one-shot-learning” competition. To increase the potential of the old dataset, we designed new well curated datasets composed of 249 gesture labels, and including 47933 gestures manually labeled the begin and end frames in sequences.Using these datasets we will open two competitions
on the CodaLab platform so that researchers can test and compare their methods for “user independent” gesture recognition. The first challenge is designed for gesture spotting
and recognition in continuous sequences of gestures while the second one is designed for gesture classification from segmented data. The baseline method based on the bag of visual words model is also presented.
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Florin Popescu, Stephane Ayache, Sergio Escalera, Xavier Baro, Cecile Capponi, Patrick Panciatici, et al. (2016). From geospatial observations of ocean currents to causal predictors of spatio-economic activity using computer vision and machine learning. In European Geosciences Union General Assembly (Vol. 18).
Abstract: The big data transformation currently revolutionizing science and industry forges novel possibilities in multimodal analysis scarcely imaginable only a decade ago. One of the important economic and industrial problems that stand to benefit from the recent expansion of data availability and computational prowess is the prediction of electricity demand and renewable energy generation. Both are correlates of human activity: spatiotemporal energy consumption patterns in society are a factor of both demand (weather dependent) and supply, which determine cost – a relation expected to strengthen along with increasing renewable energy dependence. One of the main drivers of European weather patterns is the activity of the Atlantic Ocean and in particular its dominant Northern Hemisphere current: the Gulf Stream. We choose this particular current as a test case in part due to larger amount of relevant data and scientific literature available for refinement of analysis techniques.
This data richness is due not only to its economic importance but also to its size being clearly visible in radar and infrared satellite imagery, which makes it easier to detect using Computer Vision (CV). The power of CV techniques makes basic analysis thus developed scalable to other smaller and less known, but still influential, currents, which are not just curves on a map, but complex, evolving, moving branching trees in 3D projected onto a 2D image.
We investigate means of extracting, from several image modalities (including recently available Copernicus radar and earlier Infrared satellites), a parameterized presentation of the state of the Gulf Stream and its environment that is useful as feature space representation in a machine learning context, in this case with the EC’s H2020-sponsored ‘See.4C’ project, in the context of which data scientists may find novel predictors of spatiotemporal energy flow. Although automated extractors of Gulf Stream position exist, they differ in methodology and result. We shall attempt to extract more complex feature representation including branching points, eddies and parameterized changes in transport and velocity. Other related predictive features will be similarly developed, such as inference of deep water flux long the current path and wider spatial scale features such as Hough transform, surface turbulence indicators and temperature gradient indexes along with multi-time scale analysis of ocean height and temperature dynamics. The geospatial imaging and ML community may therefore benefit from a baseline of open-source techniques useful and expandable to other related prediction and/or scientific analysis tasks.
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Daniel Hernandez, Alejandro Chacon, Antonio Espinosa, David Vazquez, Juan Carlos Moure, & Antonio Lopez. (2016). Stereo Matching using SGM on the GPU.
Abstract: Dense, robust and real-time computation of depth information from stereo-camera systems is a computationally demanding requirement for robotics, advanced driver assistance systems (ADAS) and autonomous vehicles. Semi-Global Matching (SGM) is a widely used algorithm that propagates consistency constraints along several paths across the image. This work presents a real-time system producing reliable disparity estimation results on the new embedded energy efficient GPU devices. Our design runs on a Tegra X1 at 42 frames per second (fps) for an image size of 640x480, 128 disparity levels, and using 4 path directions for the SGM method.
Keywords: CUDA; Stereo; Autonomous Vehicle
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