Martha Mackay, Fernando Alonso, Pere Salamero, Xavier Baro, Jordi Gonzalez, & Sergio Escalera. (2015). Care and caring: future proofing the new demographics. In 6th International Carers Conference.
Abstract: With an ageing population, the issue of care provision is becoming increasingly important. The simple aspiration of the majority of older people is to live safely and well at home. Housing will be part of health & care integration in the following years and decades. A higher proportion of people will have to rely on informal care through family, friends, neighbors and others who
provide care to an older person in need of assistance (around 80% of care across the EU). They do not usually have a formal status and are usually unpaid. We need to ensure that all disabled or chronically ill people can get the help they need without overburdening their families.
The physical and emotional stress of carers is one of the dangers that this dependency can bring. To prevent carers burnout it is necessary to provide new solutions that are affordable and user friendly for the families and caregivers.
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Jorge Bernal, Debora Gil, Carles Sanchez, & F. Javier Sanchez. (2014). Discarding Non Informative Regions for Efficient Colonoscopy Image Analysis. In 1st MICCAI Workshop on Computer-Assisted and Robotic Endoscopy (Vol. 8899, pp. 1–10). LNCS. Springer International Publishing.
Abstract: In this paper we present a novel polyp region segmentation method for colonoscopy videos. Our method uses valley information associated to polyp boundaries in order to provide an initial segmentation. This first segmentation is refined to eliminate boundary discontinuities caused by image artifacts or other elements of the scene. Experimental results over a publicly annotated database show that our method outperforms both general and specific segmentation methods by providing more accurate regions rich in polyp content. We also prove how image preprocessing is needed to improve final polyp region segmentation.
Keywords: Image Segmentation; Polyps, Colonoscopy; Valley Information; Energy Maps
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Joan M. Nuñez, Jorge Bernal, Miquel Ferrer, & Fernando Vilariño. (2014). Impact of Keypoint Detection on Graph-based Characterization of Blood Vessels in Colonoscopy Videos. In CARE workshop.
Abstract: We explore the potential of the use of blood vessels as anatomical landmarks for developing image registration methods in colonoscopy images. An unequivocal representation of blood vessels could be used to guide follow-up methods to track lesions over different interventions. We propose a graph-based representation to characterize network structures, such as blood vessels, based on the use of intersections and endpoints. We present a study consisting of the assessment of the minimal performance a keypoint detector should achieve so that the structure can still be recognized. Experimental results prove that, even by achieving a loss of 35% of the keypoints, the descriptive power of the associated graphs to the vessel pattern is still high enough to recognize blood vessels.
Keywords: Colonoscopy; Graph Matching; Biometrics; Vessel; Intersection
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Debora Gil, F. Javier Sanchez, Gloria Fernandez Esparrach, & Jorge Bernal. (2015). 3D Stable Spatio-temporal Polyp Localization in Colonoscopy Videos. In Computer-Assisted and Robotic Endoscopy. Revised selected papers of Second International Workshop, CARE 2015, Held in Conjunction with MICCAI 2015 (Vol. 9515, pp. 140–152). LNCS.
Abstract: Computational intelligent systems could reduce polyp miss rate in colonoscopy for colon cancer diagnosis and, thus, increase the efficiency of the procedure. One of the main problems of existing polyp localization methods is a lack of spatio-temporal stability in their response. We propose to explore the response of a given polyp localization across temporal windows in order to select
those image regions presenting the highest stable spatio-temporal response.
Spatio-temporal stability is achieved by extracting 3D watershed regions on the
temporal window. Stability in localization response is statistically determined by analysis of the variance of the output of the localization method inside each 3D region. We have explored the benefits of considering spatio-temporal stability in two different tasks: polyp localization and polyp detection. Experimental results indicate an average improvement of 21:5% in polyp localization and 43:78% in polyp detection.
Keywords: Colonoscopy, Polyp Detection, Polyp Localization, Region Extraction, Watersheds
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Quentin Angermann, Jorge Bernal, Cristina Sanchez Montes, Gloria Fernandez Esparrach, Xavier Gray, Olivier Romain, et al. (2017). Towards Real-Time Polyp Detection in Colonoscopy Videos: Adapting Still Frame-Based Methodologies for Video Sequences Analysis. In 4th International Workshop on Computer Assisted and Robotic Endoscopy (pp. 29–41).
Abstract: Colorectal cancer is the second cause of cancer death in United States: precursor lesions (polyps) detection is key for patient survival. Though colonoscopy is the gold standard screening tool, some polyps are still missed. Several computational systems have been proposed but none of them are used in the clinical room mainly due to computational constraints. Besides, most of them are built over still frame databases, decreasing their performance on video analysis due to the lack of output stability and not coping with associated variability on image quality and polyp appearance. We propose a strategy to adapt these methods to video analysis by adding a spatio-temporal stability module and studying a combination of features to capture polyp appearance variability. We validate our strategy, incorporated on a real-time detection method, on a public video database. Resulting method detects all
polyps under real time constraints, increasing its performance due to our
adaptation strategy.
Keywords: Polyp detection; colonoscopy; real time; spatio temporal coherence
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Joel Barajas, Jaume Garcia, Francesc Carreras, Sandra Pujades, & Petia Radeva. (2005). Angle Images Using Gabor Filters in Cardiac Tagged MRI. In Proceeding of the 2005 conference on Artificial Intelligence Research and Development (pp. 107–114). Amsterdam, The Netherlands: IOS Press.
Abstract: Tagged Magnetic Resonance Imaging (MRI) is a non-invasive technique used to examine cardiac deformation in vivo. An Angle Image is a representation of a Tagged MRI which recovers the relative position of the tissue respect to the distorted tags. Thus cardiac deformation can be estimated. This paper describes a new approach to generate Angle Images using a bank of Gabor filters in short axis cardiac Tagged MRI. Our method improves the Angle Images obtained by global techniques, like HARP, with a local frequency analysis. We propose to use the phase response of a combination of a Gabor filters bank, and use it to find a more precise deformation of the left ventricle. We demonstrate the accuracy of our method over HARP by several experimental results.
Keywords: Angle Images, Gabor Filters, Harp, Tagged Mri
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David Rotger, Petia Radeva, E Fernandez-Nofrerias, & J. Mauri. (2007). Blood Detection in IVUS Images for 3D Volume of Lumen Changes Measurement Due to Different Drugs Administration. In Computer Analysis of Images and Patterns, 12th International Conference (Vol. 4673, 285–292). LNCS.
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Laura Igual, Santiago Segui, Jordi Vitria, Fernando Azpiroz, & Petia Radeva. (2007). Eigenmotion-Based Detection of Intestinal Contractions. In Computer Analysis of Images and Patterns, 12th International Conference (Vol. 4673, 293–300). LNCS.
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Mehdi Mirza-Mohammadi, Sergio Escalera, & Petia Radeva. (2009). Contextual-Guided Bag-of-Visual-Words Model for Multi-class Object Categorization. In 13th International Conference on Computer Analysis of Images and Patterns (Vol. 5702, 748–756). LNCS. Springer Berlin Heidelberg.
Abstract: Bag-of-words model (BOW) is inspired by the text classification problem, where a document is represented by an unsorted set of contained words. Analogously, in the object categorization problem, an image is represented by an unsorted set of discrete visual words (BOVW). In these models, relations among visual words are performed after dictionary construction. However, close object regions can have far descriptions in the feature space, being grouped as different visual words. In this paper, we present a method for considering geometrical information of visual words in the dictionary construction step. Object interest regions are obtained by means of the Harris-Affine detector and then described using the SIFT descriptor. Afterward, a contextual-space and a feature-space are defined, and a merging process is used to fuse feature words based on their proximity in the contextual-space. Moreover, we use the Error Correcting Output Codes framework to learn the new dictionary in order to perform multi-class classification. Results show significant classification improvements when spatial information is taken into account in the dictionary construction step.
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Miquel Ferrer, Ernest Valveny, F. Serratosa, I. Bardaji, & Horst Bunke. (2009). Graph-based k-means clustering: A comparison of the set versus the generalized median graph. In 13th International Conference on Computer Analysis of Images and Patterns (Vol. 5702, 342–350). LNCS. Springer Berlin Heidelberg.
Abstract: In this paper we propose the application of the generalized median graph in a graph-based k-means clustering algorithm. In the graph-based k-means algorithm, the centers of the clusters have been traditionally represented using the set median graph. We propose an approximate method for the generalized median graph computation that allows to use it to represent the centers of the clusters. Experiments on three databases show that using the generalized median graph as the clusters representative yields better results than the set median graph.
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Muhammad Anwer Rao, David Vazquez, & Antonio Lopez. (2011). Color Contribution to Part-Based Person Detection in Different Types of Scenarios. In W. Kropatsch A. Berciano H. Molina D. D. P. Real (Ed.), 14th International Conference on Computer Analysis of Images and Patterns (Vol. 6855, pp. 463–470). Berlin Heidelberg: Springer.
Abstract: Camera-based person detection is of paramount interest due to its potential applications. The task is diffcult because the great variety of backgrounds (scenarios, illumination) in which persons are present, as well as their intra-class variability (pose, clothe, occlusion). In fact, the class person is one of the included in the popular PASCAL visual object classes (VOC) challenge. A breakthrough for this challenge, regarding person detection, is due to Felzenszwalb et al. These authors proposed a part-based detector that relies on histograms of oriented gradients (HOG) and latent support vector machines (LatSVM) to learn a model of the whole human body and its constitutive parts, as well as their relative position. Since the approach of Felzenszwalb et al. appeared new variants have been proposed, usually giving rise to more complex models. In this paper, we focus on an issue that has not attracted suficient interest up to now. In particular, we refer to the fact that HOG is usually computed from RGB color space, but other possibilities exist and deserve the corresponding investigation. In this paper we challenge RGB space with the opponent color space (OPP), which is inspired in the human vision system.We will compute the HOG on top of OPP, then we train and test the part-based human classifer by Felzenszwalb et al. using PASCAL VOC challenge protocols and person database. Our experiments demonstrate that OPP outperforms RGB. We also investigate possible differences among types of scenarios: indoor, urban and countryside. Interestingly, our experiments suggest that the beneficts of OPP with respect to RGB mainly come for indoor and countryside scenarios, those in which the human visual system was designed by evolution.
Keywords: Pedestrian Detection; Color
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Debora Gil, Aura Hernandez-Sabate, Mireia Burnat, Steven Jansen, & Jordi Martinez-Vilalta. (2009). Structure-Preserving Smoothing of Biomedical Images. In 13th International Conference on Computer Analysis of Images and Patterns (Vol. 5702, pp. 427–434). LNCS. Springer Berlin Heidelberg.
Abstract: Smoothing of biomedical images should preserve gray-level transitions between adjacent tissues, while restoring contours consistent with anatomical structures. Anisotropic diffusion operators are based on image appearance discontinuities (either local or contextual) and might fail at weak inter-tissue transitions. Meanwhile, the output of block-wise and morphological operations is prone to present a block structure due to the shape and size of the considered pixel neighborhood. In this contribution, we use differential geometry concepts to define a diffusion operator that restricts to image consistent level-sets. In this manner, the final state is a non-uniform intensity image presenting homogeneous inter-tissue transitions along anatomical structures, while smoothing intra-structure texture. Experiments on different types of medical images (magnetic resonance, computerized tomography) illustrate its benefit on a further process (such as segmentation) of images.
Keywords: non-linear smoothing; differential geometry; anatomical structures segmentation; cardiac magnetic resonance; computerized tomography.
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Petia Radeva, & Enric Marti. (1995). An improved model of snakes for model-based segmentation. In Proceedings of Computer Analysis of Images and Patterns (pp. 515–520).
Abstract: The main advantage of segmentation by snakes consists in its ability to incorporate smoothness constraints on the detected shapes that can occur. Likewise, we propose to model snakes with other properties that reflect the information provided about the object of interest in a different extent. We consider different kinds of snakes, those searching for contours with a certain direction, those preserving an object’s model, those seeking for symmetry, those expanding open, etc. The availability of such a collection of snakes allows not only the more complete use of the knowledge about the segmented object, but also to solve some problems of the existing snakes. Our experiments on segmentation of facial features justify the usefulness of snakes with different properties.
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Aura Hernandez-Sabate, Debora Gil, David Roche, Monica M. S. Matsumoto, & Sergio S. Furuie. (2011). Inferring the Performance of Medical Imaging Algorithms. In Pedro Real, Daniel Diaz-Pernil, Helena Molina-Abril, Ainhoa Berciano, & Walter Kropatsch (Eds.), 14th International Conference on Computer Analysis of Images and Patterns (Vol. 6854, pp. 520–528). LNCS. Berlin: Springer-Verlag Berlin Heidelberg.
Abstract: Evaluation of the performance and limitations of medical imaging algorithms is essential to estimate their impact in social, economic or clinical aspects. However, validation of medical imaging techniques is a challenging task due to the variety of imaging and clinical problems involved, as well as, the difficulties for systematically extracting a reliable solely ground truth. Although specific validation protocols are reported in any medical imaging paper, there are still two major concerns: definition of standardized methodologies transversal to all problems and generalization of conclusions to the whole clinical data set.
We claim that both issues would be fully solved if we had a statistical model relating ground truth and the output of computational imaging techniques. Such a statistical model could conclude to what extent the algorithm behaves like the ground truth from the analysis of a sampling of the validation data set. We present a statistical inference framework reporting the agreement and describing the relationship of two quantities. We show its transversality by applying it to validation of two different tasks: contour segmentation and landmark correspondence.
Keywords: Validation, Statistical Inference, Medical Imaging Algorithms.
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Naveen Onkarappa, & Angel Sappa. (2011). Space Variant Representations for Mobile Platform Vision Applications. In W. Kropatsch A. Berciano H. Molina D. D. P. Real (Ed.), 14th International Conference on Computer Analysis of Images and Patterns (Vol. 6855, pp. 146–154). Springer Berlin Heidelberg.
Abstract: The log-polar space variant representation, motivated by biological vision, has been widely studied in the literature. Its data reduction and invariance properties made it useful in many vision applications. However, due to its nature, it fails in preserving features in the periphery. In the current work, as an attempt to overcome this problem, we propose a novel space-variant representation. It is evaluated and proved to be better than the log-polar representation in preserving the peripheral information, crucial for on-board mobile vision applications. The evaluation is performed by comparing log-polar and the proposed representation once they are used for estimating dense optical flow.
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