Ivet Rafegas. (2017). Color in Visual Recognition: from flat to deep representations and some biological parallelisms (Maria Vanrell, Ed.). Ph.D. thesis, Ediciones Graficas Rey, .
Abstract: Visual recognition is one of the main problems in computer vision that attempts to solve image understanding by deciding what objects are in images. This problem can be computationally solved by using relevant sets of visual features, such as edges, corners, color or more complex object parts. This thesis contributes to how color features have to be represented for recognition tasks.
Image features can be extracted following two different approaches. A first approach is defining handcrafted descriptors of images which is then followed by a learning scheme to classify the content (named flat schemes in Kruger et al. (2013). In this approach, perceptual considerations are habitually used to define efficient color features. Here we propose a new flat color descriptor based on the extension of color channels to boost the representation of spatio-chromatic contrast that surpasses state-of-the-art approaches. However, flat schemes present a lack of generality far away from the capabilities of biological systems. A second approach proposes evolving these flat schemes into a hierarchical process, like in the visual cortex. This includes an automatic process to learn optimal features. These deep schemes, and more specifically Convolutional Neural Networks (CNNs), have shown an impressive performance to solve various vision problems. However, there is a lack of understanding about the internal representation obtained, as a result of automatic learning. In this thesis we propose a new methodology to explore the internal representation of trained CNNs by defining the Neuron Feature as a visualization of the intrinsic features encoded in each individual neuron. Additionally, and inspired by physiological techniques, we propose to compute different neuron selectivity indexes (e.g., color, class, orientation or symmetry, amongst others) to label and classify the full CNN neuron population to understand learned representations.
Finally, using the proposed methodology, we show an in-depth study on how color is represented on a specific CNN, trained for object recognition, that competes with primate representational abilities (Cadieu et al (2014)). We found several parallelisms with biological visual systems: (a) a significant number of color selectivity neurons throughout all the layers; (b) an opponent and low frequency representation of color oriented edges and a higher sampling of frequency selectivity in brightness than in color in 1st layer like in V1; (c) a higher sampling of color hue in the second layer aligned to observed hue maps in V2; (d) a strong color and shape entanglement in all layers from basic features in shallower layers (V1 and V2) to object and background shapes in deeper layers (V4 and IT); and (e) a strong correlation between neuron color selectivities and color dataset bias.
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Ivet Rafegas, Javier Vazquez, Robert Benavente, Maria Vanrell, & Susana Alvarez. (2017). Enhancing spatio-chromatic representation with more-than-three color coding for image description. JOSA A - Journal of the Optical Society of America A, 34(5), 827–837.
Abstract: Extraction of spatio-chromatic features from color images is usually performed independently on each color channel. Usual 3D color spaces, such as RGB, present a high inter-channel correlation for natural images. This correlation can be reduced using color-opponent representations, but the spatial structure of regions with small color differences is not fully captured in two generic Red-Green and Blue-Yellow channels. To overcome these problems, we propose a new color coding that is adapted to the specific content of each image. Our proposal is based on two steps: (a) setting the number of channels to the number of distinctive colors we find in each image (avoiding the problem of channel correlation), and (b) building a channel representation that maximizes contrast differences within each color channel (avoiding the problem of low local contrast). We call this approach more-than-three color coding (MTT) to enhance the fact that the number of channels is adapted to the image content. The higher color complexity an image has, the more channels can be used to represent it. Here we select distinctive colors as the most predominant in the image, which we call color pivots, and we build the new color coding using these color pivots as a basis. To evaluate the proposed approach we measure its efficiency in an image categorization task. We show how a generic descriptor improves its performance at the description level when applied on the MTT coding.
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Ivet Rafegas, & Maria Vanrell. (2017). Color representation in CNNs: parallelisms with biological vision. In ICCV Workshop on Mutual Benefits ofr Cognitive and Computer Vision.
Abstract: Convolutional Neural Networks (CNNs) trained for object recognition tasks present representational capabilities approaching to primate visual systems [1]. This provides a computational framework to explore how image features
are efficiently represented. Here, we dissect a trained CNN
[2] to study how color is represented. We use a classical methodology used in physiology that is measuring index of selectivity of individual neurons to specific features. We use ImageNet Dataset [20] images and synthetic versions
of them to quantify color tuning properties of artificial neurons to provide a classification of the network population.
We conclude three main levels of color representation showing some parallelisms with biological visual systems: (a) a decomposition in a circular hue space to represent single color regions with a wider hue sampling beyond the first
layer (V2), (b) the emergence of opponent low-dimensional spaces in early stages to represent color edges (V1); and (c) a strong entanglement between color and shape patterns representing object-parts (e.g. wheel of a car), objectshapes (e.g. faces) or object-surrounds configurations (e.g. blue sky surrounding an object) in deeper layers (V4 or IT).
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J. Chazalon, P. Gomez-Kramer, Jean-Christophe Burie, M.Coustaty, S.Eskenazi, Muhammad Muzzamil Luqman, et al. (2017). SmartDoc 2017 Video Capture: Mobile Document Acquisition in Video Mode. In 1st International Workshop on Open Services and Tools for Document Analysis.
Abstract: As mobile document acquisition using smartphones is getting more and more common, along with the continuous improvement of mobile devices (both in terms of computing power and image quality), we can wonder to which extent mobile phones can replace desktop scanners. Modern applications can cope with perspective distortion and normalize the contrast of a document page captured with a smartphone, and in some cases like bottle labels or posters, smartphones even have the advantage of allowing the acquisition of non-flat or large documents. However, several cases remain hard to handle, such as reflective documents (identity cards, badges, glossy magazine cover, etc.) or large documents for which some regions require an important amount of detail. This paper introduces the SmartDoc 2017 benchmark (named “SmartDoc Video Capture”), which aims at
assessing whether capturing documents using the video mode of a smartphone could solve those issues. The task under evaluation is both a stitching and a reconstruction problem, as the user can move the device over different parts of the document to capture details or try to erase highlights. The material released consists of a dataset, an evaluation method and the associated tool, a sample method, and the tools required to extend the dataset. All the components are released publicly under very permissive licenses, and we particularly cared about maximizing the ease of
understanding, usage and improvement.
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Jean-Pascal Jacob, Mariella Dimiccoli, & L. Moisan. (2017). Active skeleton for bacteria modelling. CMBBE - Computer Methods in Biomechanics and Biomedical Engineering: Imaging and Visualization, 5(4), 274–286.
Abstract: The investigation of spatio-temporal dynamics of bacterial cells and their molecular components requires automated image analysis tools to track cell shape properties and molecular component locations inside the cells. In the study of bacteria aging, the molecular components of interest are protein aggregates accumulated near bacteria boundaries. This particular location makes very ambiguous the correspondence between aggregates and cells, since computing accurately bacteria boundaries in phase-contrast time-lapse imaging is a challenging task. This paper proposes an active skeleton formulation for bacteria modelling which provides several advantages: an easy computation of shape properties (perimeter, length, thickness and orientation), an improved boundary accuracy in noisy images and a natural bacteria-centred coordinate system that permits the intrinsic location of molecular components inside the cell. Starting from an initial skeleton estimate, the medial axis of the bacterium is obtained by minimising an energy function which incorporates bacteria shape constraints. Experimental results on biological images and comparative evaluation of the performances validate the proposed approach for modelling cigar-shaped bacteria like Escherichia coli. The Image-J plugin of the proposed method can be found online at http://fluobactracker.inrialpes.fr.
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Joan Serrat, Felipe Lumbreras, Francisco Blanco, Manuel Valiente, & Montserrat Lopez-Mesas. (2017). myStone: A system for automatic kidney stone classification. ESA - Expert Systems with Applications, 89, 41–51.
Abstract: Kidney stone formation is a common disease and the incidence rate is constantly increasing worldwide. It has been shown that the classification of kidney stones can lead to an important reduction of the recurrence rate. The classification of kidney stones by human experts on the basis of certain visual color and texture features is one of the most employed techniques. However, the knowledge of how to analyze kidney stones is not widespread, and the experts learn only after being trained on a large number of samples of the different classes. In this paper we describe a new device specifically designed for capturing images of expelled kidney stones, and a method to learn and apply the experts knowledge with regard to their classification. We show that with off the shelf components, a carefully selected set of features and a state of the art classifier it is possible to automate this difficult task to a good degree. We report results on a collection of 454 kidney stones, achieving an overall accuracy of 63% for a set of eight classes covering almost all of the kidney stones taxonomy. Moreover, for more than 80% of samples the real class is the first or the second most probable class according to the system, being then the patient recommendations for the two top classes similar. This is the first attempt towards the automatic visual classification of kidney stones, and based on the current results we foresee better accuracies with the increase of the dataset size.
Keywords: Kidney stone; Optical device; Computer vision; Image classification
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Jordi Esquirol, Cristina Palmero, Vanessa Bayo, Miquel Angel Cos, Sergio Escalera, David Sanchez, et al. (2017). Automatic RBG-depth-pressure anthropometric analysis and individualised sleep solution prescription. JMET - Journal of Medical Engineering & Technology, 486–497.
Abstract: INTRODUCTION:
Sleep surfaces must adapt to individual somatotypic features to maintain a comfortable, convenient and healthy sleep, preventing diseases and injuries. Individually determining the most adequate rest surface can often be a complex and subjective question.
OBJECTIVES:
To design and validate an automatic multimodal somatotype determination model to automatically recommend an individually designed mattress-topper-pillow combination.
METHODS:
Design and validation of an automated prescription model for an individualised sleep system is performed through a single-image 2 D-3 D analysis and body pressure distribution, to objectively determine optimal individual sleep surfaces combining five different mattress densities, three different toppers and three cervical pillows.
RESULTS:
A final study (n = 151) and re-analysis (n = 117) defined and validated the model, showing high correlations between calculated and real data (>85% in height and body circumferences, 89.9% in weight, 80.4% in body mass index and more than 70% in morphotype categorisation).
CONCLUSIONS:
Somatotype determination model can accurately prescribe an individualised sleep solution. This can be useful for healthy people and for health centres that need to adapt sleep surfaces to people with special needs. Next steps will increase model's accuracy and analise, if this prescribed individualised sleep solution can improve sleep quantity and quality; additionally, future studies will adapt the model to mattresses with technological improvements, tailor-made production and will define interfaces for people with special needs.
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Jorge Bernal, Nima Tajkbaksh, F. Javier Sanchez, Bogdan J. Matuszewski, Hao Chen, Lequan Yu, et al. (2017). Comparative Validation of Polyp Detection Methods in Video Colonoscopy: Results from the MICCAI 2015 Endoscopic Vision Challenge. TMI - IEEE Transactions on Medical Imaging, 36(6), 1231–1249.
Abstract: Colonoscopy is the gold standard for colon cancer screening though still some polyps are missed, thus preventing early disease detection and treatment. Several computational systems have been proposed to assist polyp detection during colonoscopy but so far without consistent evaluation. The lack
of publicly available annotated databases has made it difficult to compare methods and to assess if they achieve performance levels acceptable for clinical use. The Automatic Polyp Detection subchallenge, conducted as part of the Endoscopic Vision Challenge (http://endovis.grand-challenge.org) at the international conference on Medical Image Computing and Computer Assisted
Intervention (MICCAI) in 2015, was an effort to address this need. In this paper, we report the results of this comparative evaluation of polyp detection methods, as well as describe additional experiments to further explore differences between methods. We define performance metrics and provide evaluation databases that allow comparison of multiple methodologies. Results show that convolutional neural networks (CNNs) are the state of the art. Nevertheless it is also demonstrated that combining different methodologies can lead to an improved overall performance.
Keywords: Endoscopic vision; Polyp Detection; Handcrafted features; Machine Learning; Validation Framework
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Jose Garcia-Rodriguez, Isabelle Guyon, Sergio Escalera, Alexandra Psarrou, Andrew Lewis, & Miguel Cazorla. (2017). Editorial: Special Issue on Computational Intelligence for Vision and Robotics. Neural Computing and Applications - Neural Computing and Applications, 28(5), 853–854.
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Juan Ignacio Toledo, Sounak Dey, Alicia Fornes, & Josep Llados. (2017). Handwriting Recognition by Attribute embedding and Recurrent Neural Networks. In 14th International Conference on Document Analysis and Recognition (pp. 1038–1043).
Abstract: Handwriting recognition consists in obtaining the transcription of a text image. Recent word spotting methods based on attribute embedding have shown good performance when recognizing words. However, they are holistic methods in the sense that they recognize the word as a whole (i.e. they find the closest word in the lexicon to the word image). Consequently,
these kinds of approaches are not able to deal with out of vocabulary words, which are common in historical manuscripts. Also, they cannot be extended to recognize text lines. In order to address these issues, in this paper we propose a handwriting recognition method that adapts the attribute embedding to sequence learning. Concretely, the method learns the attribute embedding of patches of word images with a convolutional neural network. Then, these embeddings are presented as a sequence to a recurrent neural network that produces the transcription. We obtain promising results even without the use of any kind of dictionary or language model
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Julio C. S. Jacques Junior, Xavier Baro, & Sergio Escalera. (2017). Exploiting feature representations through similarity learning and ranking aggregation for person re-identification. In 12th IEEE International Conference on Automatic Face and Gesture Recognition.
Abstract: Person re-identification has received special attentionby the human analysis community in the last few years.To address the challenges in this field, many researchers haveproposed different strategies, which basically exploit eithercross-view invariant features or cross-view robust metrics. Inthis work we propose to combine different feature representationsthrough ranking aggregation. Spatial information, whichpotentially benefits the person matching, is represented usinga 2D body model, from which color and texture informationare extracted and combined. We also consider contextualinformation (background and foreground data), automaticallyextracted via Deep Decompositional Network, and the usage ofConvolutional Neural Network (CNN) features. To describe thematching between images we use the polynomial feature map,also taking into account local and global information. Finally,the Stuart ranking aggregation method is employed to combinecomplementary ranking lists obtained from different featurerepresentations. Experimental results demonstrated that weimprove the state-of-the-art on VIPeR and PRID450s datasets,achieving 58.77% and 71.56% on top-1 rank recognitionrate, respectively, as well as obtaining competitive results onCUHK01 dataset.
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Jun Wan, Sergio Escalera, Gholamreza Anbarjafari, Hugo Jair Escalante, Xavier Baro, Isabelle Guyon, et al. (2017). Results and Analysis of ChaLearn LAP Multi-modal Isolated and ContinuousGesture Recognition, and Real versus Fake Expressed Emotions Challenges. In Chalearn Workshop on Action, Gesture, and Emotion Recognition: Large Scale Multimodal Gesture Recognition and Real versus Fake expressed emotions at ICCV.
Abstract: We analyze the results of the 2017 ChaLearn Looking at People Challenge at ICCV. The challenge comprised three tracks: (1) large-scale isolated (2) continuous gesture recognition, and (3) real versus fake expressed emotions tracks. It is the second round for both gesture recognition challenges, which were held first in the context of the ICPR 2016 workshop on “multimedia challenges beyond visual analysis”. In this second round, more participants joined the competitions, and the performances considerably improved compared to the first round. Particularly, the best recognition accuracy of isolated gesture recognition has improved from 56.90% to 67.71% in the IsoGD test set, and Mean Jaccard Index (MJI) of continuous gesture recognition has improved from 0.2869 to 0.6103 in the ConGD test set. The third track is the first challenge on real versus fake expressed emotion classification, including six emotion categories, for which a novel database was introduced. The first place was shared between two teams who achieved 67.70% averaged recognition rate on the test set. The data of the three tracks, the participants' code and method descriptions are publicly available to allow researchers to keep making progress in the field.
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Karim Lekadir, Alfiia Galimzianova, Angels Betriu, Maria del Mar Vila, Laura Igual, Daniel L. Rubin, et al. (2017). A Convolutional Neural Network for Automatic Characterization of Plaque Composition in Carotid Ultrasound. J-BHI - IEEE Journal Biomedical and Health Informatics, 21(1), 48–55.
Abstract: Characterization of carotid plaque composition, more specifically the amount of lipid core, fibrous tissue, and calcified tissue, is an important task for the identification of plaques that are prone to rupture, and thus for early risk estimation of cardiovascular and cerebrovascular events. Due to its low costs and wide availability, carotid ultrasound has the potential to become the modality of choice for plaque characterization in clinical practice. However, its significant image noise, coupled with the small size of the plaques and their complex appearance, makes it difficult for automated techniques to discriminate between the different plaque constituents. In this paper, we propose to address this challenging problem by exploiting the unique capabilities of the emerging deep learning framework. More specifically, and unlike existing works which require a priori definition of specific imaging features or thresholding values, we propose to build a convolutional neural network (CNN) that will automatically extract from the images the information that is optimal for the identification of the different plaque constituents. We used approximately 90 000 patches extracted from a database of images and corresponding expert plaque characterizations to train and to validate the proposed CNN. The results of cross-validation experiments show a correlation of about 0.90 with the clinical assessment for the estimation of lipid core, fibrous cap, and calcified tissue areas, indicating the potential of deep learning for the challenging task of automatic characterization of plaque composition in carotid ultrasound.
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Katerine Diaz, Jesus Martinez del Rincon, & Aura Hernandez-Sabate. (2017). Decremental generalized discriminative common vectors applied to images classification. KBS - Knowledge-Based Systems, 131, 46–57.
Abstract: In this paper, a novel decremental subspace-based learning method called Decremental Generalized Discriminative Common Vectors method (DGDCV) is presented. The method makes use of the concept of decremental learning, which we introduce in the field of supervised feature extraction and classification. By efficiently removing unnecessary data and/or classes for a knowledge base, our methodology is able to update the model without recalculating the full projection or accessing to the previously processed training data, while retaining the previously acquired knowledge. The proposed method has been validated in 6 standard face recognition datasets, showing a considerable computational gain without compromising the accuracy of the model.
Keywords: Decremental learning; Generalized Discriminative Common Vectors; Feature extraction; Linear subspace methods; Classification
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Katerine Diaz, Konstantia Georgouli, Anastasios Koidis, & Jesus Martinez del Rincon. (2017). Incremental model learning for spectroscopy-based food analysis. CILS - Chemometrics and Intelligent Laboratory Systems, 167, 123–131.
Abstract: In this paper we propose the use of incremental learning for creating and improving multivariate analysis models in the field of chemometrics of spectral data. As main advantages, our proposed incremental subspace-based learning allows creating models faster, progressively improving previously created models and sharing them between laboratories and institutions without requiring transferring or disclosing individual spectra samples. In particular, our approach allows to improve the generalization and adaptability of previously generated models with a few new spectral samples to be applicable to real-world situations. The potential of our approach is demonstrated using vegetable oil type identification based on spectroscopic data as case study. Results show how incremental models maintain the accuracy of batch learning methodologies while reducing their computational cost and handicaps.
Keywords: Incremental model learning; IGDCV technique; Subspace based learning; IdentificationVegetable oils; FT-IR spectroscopy
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