Abstract: Gliomas are the most common primary brain malignancies, with different degrees of aggressiveness, variable prognosis and various heterogeneous histologic sub-regions, i.e., peritumoral edematous/invaded tissue, necrotic core, active and non-enhancing core. This intrinsic heterogeneity is also portrayed in their radio-phenotype, as their sub-regions are depicted by varying intensity profiles disseminated across multiparametric magnetic resonance imaging (mpMRI) scans, reflecting varying biological properties. Their heterogeneous shape, extent, and location are some of the factors that make these tumors difficult to resect, and in some cases inoperable. The amount of resected tumor is a factor also considered in longitudinal scans, when evaluating the apparent tumor for potential diagnosis of progression. Furthermore, there is mounting evidence that accurate segmentation of the various tumor sub-regions can offer the basis for quantitative image analysis towards prediction of patient overall survival. This study assesses the state-of-the-art machine learning (ML) methods used for brain tumor image analysis in mpMRI scans, during the last seven instances of the International Brain Tumor Segmentation (BraTS) challenge, i.e. 2012-2018. Specifically, we focus on i) evaluating segmentations of the various glioma sub-regions in preoperative mpMRI scans, ii) assessing potential tumor progression by virtue of longitudinal growth of tumor sub-regions, beyond use of the RECIST criteria, and iii) predicting the overall survival from pre-operative mpMRI scans of patients that undergone gross total resection. Finally, we investigate the challenge of identifying the best ML algorithms for each of these tasks, considering that apart from being diverse on each instance of the challenge, the multi-institutional mpMRI BraTS dataset has also been a continuously evolving/growing dataset.

Abstract: We live in a society where the large majority of the population has a camera-equipped smartphone. In addition, hard drives and cloud storage are getting cheaper and cheaper, leading to a tremendous growth in stored personal photos. Unlike photo collections captured by a digital camera, which typically are pre-processed by the user who organizes them into event-related folders, smartphone pictures are automatically stored in the cloud. As a consequence, photo collections captured by a smartphone are highly unstructured and because smartphones are ubiquitous, they present a larger variability compared to pictures captured by a digital camera. To solve the need of organizing large smartphone photo collections automatically, we propose here a new methodology for hierarchical photo organization into topics and topic-related categories. Our approach successfully estimates latent topics in the pictures by applying probabilistic Latent Semantic Analysis, and automatically assigns a name to each topic by relying on a lexical database. Topic-related categories are then estimated by using a set of topic-specific Convolutional Neuronal Networks. To validate our approach, we ensemble and make public a large dataset of more than 8,000 smartphone pictures from 10 persons. Experimental results demonstrate better user satisfaction with respect to state of the art solutions in terms of organization.

Abstract: Varroa destructor is a parasite harming bee colonies. As the worldwide bee population is in danger, beekeepers as well as researchers are looking for methods to monitor the health of bee hives. In this context, we present a preliminary study to detect parasites on bee videos by means of image analysis and machine learning techniques. For this purpose, each video frame is analyzed individually to extract bee image patches, which are then processed to compute image descriptors and finally classified into mite and no mite bees. The experimental results demonstrated the adequacy of the proposed method, which will be a perfect stepping stone for a further bee monitoring system.

Abstract: This paper introduces the DocILE benchmark with the largest dataset of business documents for the tasks of Key Information Localization and Extraction and Line Item Recognition. It contains 6.7k annotated business documents, 100k synthetically generated documents, and nearly 1M unlabeled documents for unsupervised pre-training. The dataset has been built with knowledge of domain- and task-specific aspects, resulting in the following key features: (i) annotations in 55 classes, which surpasses the granularity of previously published key information extraction datasets by a large margin; (ii) Line Item Recognition represents a highly practical information extraction task, where key information has to be assigned to items in a table; (iii) documents come from numerous layouts and the test set includes zero- and few-shot cases as well as layouts commonly seen in the training set. The benchmark comes with several baselines, including RoBERTa, LayoutLMv3 and DETR-based Table Transformer; applied to both tasks of the DocILE benchmark, with results shared in this paper, offering a quick starting point for future work. The dataset, baselines and supplementary material are available at https://github.com/rossumai/docile.

Abstract: Modern computer vision requires processing large amounts of data, both while training the model and/or during inference, once the model is deployed. Scenarios where images are captured and processed in physically separated locations are increasingly common (e.g. autonomous vehicles, cloud computing). In addition, many devices suffer from limited resources to store or transmit data (e.g. storage space, channel capacity). In these scenarios, lossy image compression plays a crucial role to effectively increase the number of images collected under such constraints. However, lossy compression entails some undesired degradation of the data that may harm the performance of the downstream analysis task at hand, since important semantic information may be lost in the process. Moreover, we may only have compressed images at training time but are able to use original images at inference time, or vice versa, and in such a case, the downstream model suffers from covariate shift. In this paper, we analyze this phenomenon, with a special focus on vision-based perception for autonomous driving as a paradigmatic scenario. We see that loss of semantic information and covariate shift do indeed exist, resulting in a drop in performance that depends on the compression rate. In order to address the problem, we propose dataset restoration, based on image restoration with generative adversarial networks (GANs). Our method is agnostic to both the particular image compression method and the downstream task; and has the advantage of not adding additional cost to the deployed models, which is particularly important in resource-limited devices. The presented experiments focus on semantic segmentation as a challenging use case, cover a broad range of compression rates and diverse datasets, and show how our method is able to significantly alleviate the negative effects of compression on the downstream visual task.

Abstract: Text is the most common way of information sharing from ages. With recent development of personal images databases and handwritten historic manuscripts the demand for algorithms to make these databases accessible for browsing and indexing are in rise. Enabling search or understanding large collection of manuscripts or image databases needs fast and robust methods. Researchers have found different ways to represent cropped words for understanding and matching, which works well when words are already segmented. However there is no trivial way to extend these for non-segmented documents. In this thesis we explore different methods for text retrieval and recognition from unsegmented document and scene images. Two different ways of representation exist in literature, one uses a fixed length representation learned from cropped words and another a sequence of features of variable length. Throughout this thesis, we have studied both these representation for their suitability in segmentation free understanding of text. In the first part we are focused on segmentation free word spotting using a fixed length representation. We extended the use of the successful PHOC (Pyramidal Histogram of Character) representation to segmentation free retrieval. In the second part of the thesis, we explore sequence based features and finally, we propose a unified solution where the same framework can generate both kind of representations.

Abstract: In this paper we propose a segmentation-free approach to word spotting. Word images are first encoded into feature vectors using Fisher Vector. Then, these feature vectors are used together with pyramidal histogram of characters labels (PHOC) to learn SVM-based attribute models. Documents are represented by these PHOC based word attributes. To efficiently compute the word attributes over a sliding window, we propose to use an integral image representation of the document using a simplified version of the attribute model. Finally we re-rank the top word candidates using the more discriminative full version of the word attributes. We show state-of-the-art results for segmentation-free query-by-example word spotting in single-writer and multi-writer standard datasets.

Abstract: arXiv:1706.01487
In this paper we propose an approach to lexicon-free recognition of text in scene images. Our approach relies on a LSTM-based soft visual attention model learned from convolutional features. A set of feature vectors are derived from an intermediate convolutional layer corresponding to different areas of the image. This permits encoding of spatial information into the image representation. In this way, the framework is able to learn how to selectively focus on different parts of the image. At every time step the recognizer emits one character using a weighted combination of the convolutional feature vectors according to the learned attention model. Training can be done end-to-end using only word level annotations. In addition, we show that modifying the beam search algorithm by integrating an explicit language model leads to significantly better recognition results. We validate the performance of our approach on standard SVT and ICDAR'03 scene text datasets, showing state-of-the-art performance in unconstrained text recognition.