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Author Joan M. Nuñez
Title Vascular Pattern Characterization in Colonoscopy Images Type Book Whole
Year 2015 Publication PhD Thesis, Universitat Autonoma de Barcelona-CVC Abbreviated Journal
Volume Issue Pages
Keywords
Abstract Colorectal cancer is the third most common cancer worldwide and the second most common malignant tumor in Europe. Screening tests have shown to be very e ective in increasing the survival rates since they allow an early detection of polyps. Among the di erent screening techniques, colonoscopy is considered the gold standard although clinical studies mention several problems that have an impact in the quality of the procedure. The navigation through the rectum and colon track can be challenging for the physicians which can increase polyp miss rates. The thorough visualization of the colon track must be ensured so that
the chances of missing lesions are minimized. The visual analysis of colonoscopy images can provide important information to the physicians and support their navigation during the procedure.
Blood vessels and their branching patterns can provide descriptive power to potentially develop biometric markers. Anatomical markers based on blood vessel patterns could be used to identify a particular scene in colonoscopy videos and to support endoscope navigation by generating a sequence of ordered scenes through the di erent colon sections. By verifying the presence of vascular content in the endoluminal scene it is also possible to certify a proper
inspection of the colon mucosa and to improve polyp localization. Considering the potential uses of blood vessel description, this contribution studies the characterization of the vascular content and the analysis of the descriptive power of its branching patterns.
Blood vessel characterization in colonoscopy images is shown to be a challenging task. The endoluminal scene is conformed by several elements whose similar characteristics hinder the development of particular models for each of them. To overcome such diculties we propose the use of the blood vessel branching characteristics as key features for pattern description. We present a model to characterize junctions in binary patterns. The implementation
of the junction model allows us to develop a junction localization method. We
created two data sets including manually labeled vessel information as well as manual ground truths of two types of keypoint landmarks: junctions and endpoints. The proposed method outperforms the available algorithms in the literature in experiments in both, our newly created colon vessel data set, and in DRIVE retinal fundus image data set. In the latter case, we created a manual ground truth of junction coordinates. Since we want to explore the descriptive potential of junctions and vessels, we propose a graph-based approach to
create anatomical markers. In the context of polyp localization, we present a new method to inhibit the in uence of blood vessels in the extraction valley-pro le information. The results show that our methodology decreases vessel in
uence, increases polyp information and leads to an improvement in state-of-the-art polyp localization performance. We also propose a polyp-speci c segmentation method that outperforms other general and speci c approaches.
Address (down) November 2015
Corporate Author Thesis Ph.D. thesis
Publisher Ediciones Graficas Rey Place of Publication Editor Fernando Vilariño
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 978-84-943427-6-9 Medium
Area Expedition Conference
Notes MV Approved no
Call Number Admin @ si @ Nuñ2015 Serial 2709
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Author Pau Torras; Arnau Baro; Alicia Fornes; Lei Kang
Title Improving Handwritten Music Recognition through Language Model Integration Type Conference Article
Year 2022 Publication 4th International Workshop on Reading Music Systems (WoRMS2022) Abbreviated Journal
Volume Issue Pages 42-46
Keywords optical music recognition; historical sources; diversity; music theory; digital humanities
Abstract Handwritten Music Recognition, especially in the historical domain, is an inherently challenging endeavour; paper degradation artefacts and the ambiguous nature of handwriting make recognising such scores an error-prone process, even for the current state-of-the-art Sequence to Sequence models. In this work we propose a way of reducing the production of statistically implausible output sequences by fusing a Language Model into a recognition Sequence to Sequence model. The idea is leveraging visually-conditioned and context-conditioned output distributions in order to automatically find and correct any mistakes that would otherwise break context significantly. We have found this approach to improve recognition results to 25.15 SER (%) from a previous best of 31.79 SER (%) in the literature.
Address (down) November 18, 2022
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference WoRMS
Notes DAG; 600.121; 600.162; 602.230 Approved no
Call Number Admin @ si @ TBF2022 Serial 3735
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Author Adria Ruiz; Joost Van de Weijer; Xavier Binefa
Title Regularized Multi-Concept MIL for weakly-supervised facial behavior categorization Type Conference Article
Year 2014 Publication 25th British Machine Vision Conference Abbreviated Journal
Volume Issue Pages
Keywords
Abstract We address the problem of estimating high-level semantic labels for videos of recorded people by means of analysing their facial expressions. This problem, to which we refer as facial behavior categorization, is a weakly-supervised learning problem where we do not have access to frame-by-frame facial gesture annotations but only weak-labels at the video level are available. Therefore, the goal is to learn a set of discriminative expressions and how they determine the video weak-labels. Facial behavior categorization can be posed as a Multi-Instance-Learning (MIL) problem and we propose a novel MIL method called Regularized Multi-Concept MIL to solve it. In contrast to previous approaches applied in facial behavior analysis, RMC-MIL follows a Multi-Concept assumption which allows different facial expressions (concepts) to contribute differently to the video-label. Moreover, to handle with the high-dimensional nature of facial-descriptors, RMC-MIL uses a discriminative approach to model the concepts and structured sparsity regularization to discard non-informative features. RMC-MIL is posed as a convex-constrained optimization problem where all the parameters are jointly learned using the Projected-Quasi-Newton method. In our experiments, we use two public data-sets to show the advantages of the Regularized Multi-Concept approach and its improvement compared to existing MIL methods. RMC-MIL outperforms state-of-the-art results in the UNBC data-set for pain detection.
Address (down) Nottingham; UK; September 2014
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference BMVC
Notes LAMP; CIC; 600.074; 600.079 Approved no
Call Number Admin @ si @ RWB2014 Serial 2508
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Author Jiaolong Xu; Sebastian Ramos; David Vazquez; Antonio Lopez
Title Incremental Domain Adaptation of Deformable Part-based Models Type Conference Article
Year 2014 Publication 25th British Machine Vision Conference Abbreviated Journal
Volume Issue Pages
Keywords Pedestrian Detection; Part-based models; Domain Adaptation
Abstract Nowadays, classifiers play a core role in many computer vision tasks. The underlying assumption for learning classifiers is that the training set and the deployment environment (testing) follow the same probability distribution regarding the features used by the classifiers. However, in practice, there are different reasons that can break this constancy assumption. Accordingly, reusing existing classifiers by adapting them from the previous training environment (source domain) to the new testing one (target domain)
is an approach with increasing acceptance in the computer vision community. In this paper we focus on the domain adaptation of deformable part-based models (DPMs) for object detection. In particular, we focus on a relatively unexplored scenario, i.e. incremental domain adaptation for object detection assuming weak-labeling. Therefore, our algorithm is ready to improve existing source-oriented DPM-based detectors as soon as a little amount of labeled target-domain training data is available, and keeps improving as more of such data arrives in a continuous fashion. For achieving this, we follow a multiple
instance learning (MIL) paradigm that operates in an incremental per-image basis. As proof of concept, we address the challenging scenario of adapting a DPM-based pedestrian detector trained with synthetic pedestrians to operate in real-world scenarios. The obtained results show that our incremental adaptive models obtain equally good accuracy results as the batch learned models, while being more flexible for handling continuously arriving target-domain data.
Address (down) Nottingham; uk; September 2014
Corporate Author Thesis
Publisher BMVA Press Place of Publication Editor Valstar, Michel and French, Andrew and Pridmore, Tony
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference BMVC
Notes ADAS; 600.057; 600.054; 600.076 Approved no
Call Number XRV2014c; ADAS @ adas @ xrv2014c Serial 2455
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Author M. Danelljan; Fahad Shahbaz Khan; Michael Felsberg; Joost Van de Weijer
Title Adaptive color attributes for real-time visual tracking Type Conference Article
Year 2014 Publication 27th IEEE Conference on Computer Vision and Pattern Recognition Abbreviated Journal
Volume Issue Pages 1090 - 1097
Keywords
Abstract Visual tracking is a challenging problem in computer vision. Most state-of-the-art visual trackers either rely on luminance information or use simple color representations for image description. Contrary to visual tracking, for object
recognition and detection, sophisticated color features when combined with luminance have shown to provide excellent performance. Due to the complexity of the tracking problem, the desired color feature should be computationally
efficient, and possess a certain amount of photometric invariance while maintaining high discriminative power.
This paper investigates the contribution of color in a tracking-by-detection framework. Our results suggest that color attributes provides superior performance for visual tracking. We further propose an adaptive low-dimensional
variant of color attributes. Both quantitative and attributebased evaluations are performed on 41 challenging benchmark color sequences. The proposed approach improves the baseline intensity-based tracker by 24% in median distance precision. Furthermore, we show that our approach outperforms
state-of-the-art tracking methods while running at more than 100 frames per second.
Address (down) Nottingham; UK; September 2014
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference CVPR
Notes CIC; LAMP; 600.074; 600.079 Approved no
Call Number Admin @ si @ DKF2014 Serial 2509
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Author Antonio Hernandez; Stan Sclaroff; Sergio Escalera
Title Contextual rescoring for Human Pose Estimation Type Conference Article
Year 2014 Publication 25th British Machine Vision Conference Abbreviated Journal
Volume Issue Pages
Keywords
Abstract A contextual rescoring method is proposed for improving the detection of body joints of a pictorial structure model for human pose estimation. A set of mid-level parts is incorporated in the model, and their detections are used to extract spatial and score-related features relative to other body joint hypotheses. A technique is proposed for the automatic discovery of a compact subset of poselets that covers a set of validation images
while maximizing precision. A rescoring mechanism is defined as a set-based boosting classifier that computes a new score for body joint detections, given its relationship to detections of other body joints and mid-level parts in the image. This new score complements the unary potential of a discriminatively trained pictorial structure model. Experiments on two benchmarks show performance improvements when considering the proposed mid-level image representation and rescoring approach in comparison with other pictorial structure-based approaches.
Address (down) Nottingham; UK; September 2013
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference BMVC
Notes HuPBA;MILAB Approved no
Call Number HSE2014 Serial 2525
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Author Yaxing Wang; Abel Gonzalez-Garcia; Joost Van de Weijer; Luis Herranz
Title SDIT: Scalable and Diverse Cross-domain Image Translation Type Conference Article
Year 2019 Publication 27th ACM International Conference on Multimedia Abbreviated Journal
Volume Issue Pages 1267–1276
Keywords
Abstract Recently, image-to-image translation research has witnessed remarkable progress. Although current approaches successfully generate diverse outputs or perform scalable image transfer, these properties have not been combined into a single method. To address this limitation, we propose SDIT: Scalable and Diverse image-to-image translation. These properties are combined into a single generator. The diversity is determined by a latent variable which is randomly sampled from a normal distribution. The scalability is obtained by conditioning the network on the domain attributes. Additionally, we also exploit an attention mechanism that permits the generator to focus on the domain-specific attribute. We empirically demonstrate the performance of the proposed method on face mapping and other datasets beyond faces.
Address (down) Nice; Francia; October 2019
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference ACM-MM
Notes LAMP; 600.106; 600.109; 600.141; 600.120 Approved no
Call Number Admin @ si @ WGW2019 Serial 3363
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Author Oscar Camara; Estanislao Oubel; Gemma Piella; Simone Balocco; Mathieu De Craene; Alejandro F. Frangi
Title Multi-sequence Registration of Cine, Tagged and Delay-Enhancement MRI with Shift Correction and Steerable Pyramid-Based Detagging Type Conference Article
Year 2009 Publication 5th International Conference on Functional Imaging and Modeling of the Heart Abbreviated Journal
Volume 5528 Issue Pages 330–338
Keywords
Abstract In this work, we present a registration framework for cardiac cine MRI (cMRI), tagged (tMRI) and delay-enhancement MRI (deMRI), where the two main issues to find an accurate alignment between these images have been taking into account: the presence of tags in tMRI and respiration artifacts in all sequences. A steerable pyramid image decomposition has been used for detagging purposes since it is suitable to extract high-order oriented structures by directional adaptive filtering. Shift correction of cMRI is achieved by firstly maximizing the similarity between the Long Axis and Short Axis cMRI. Subsequently, these shift-corrected images are used as target images in a rigid registration procedure with their corresponding tMRI/deMRI in order to correct their shift. The proposed registration framework has been evaluated by 840 registration tests, considerably improving the alignment of the MR images (mean RMS error of 2.04mm vs. 5.44mm).
Address (down) Nice, France
Corporate Author Thesis
Publisher Springer Berlin Heidelberg Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title LNCS
Series Volume Series Issue Edition
ISSN 0302-9743 ISBN 978-3-642-01931-9 Medium
Area Expedition Conference FIMH
Notes MILAB Approved no
Call Number BCNPCL @ bcnpcl @ COP2009 Serial 1255
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Author Ferran Poveda; Debora Gil;Enric Marti
Title Multi-resolution DT-MRI cardiac tractography Type Conference Article
Year 2012 Publication Statistical Atlases And Computational Models Of The Heart: Imaging and Modelling Challenges Abbreviated Journal
Volume 7746 Issue Pages 270-277
Keywords
Abstract Even using objective measures from DT-MRI no consensus about myocardial architecture has been achieved so far. Streamlining provides good reconstructions at low level of detail, but falls short to give global abstract interpretations. In this paper, we present a multi-resolution methodology that is able to produce simplified representations of cardiac architecture. Our approach produces a reduced set of tracts that are representative of the main geometric features of myocardial anatomical structure. Experiments show that fiber geometry is preserved along reductions, which validates the simplified model for interpretation of cardiac architecture.
Address (down) Nice, France
Corporate Author Thesis
Publisher Springer Berlin Heidelberg Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title LNCS
Series Volume Series Issue Edition
ISSN 0302-9743 ISBN 978-3-642-36960-5 Medium
Area Expedition Conference STACOM
Notes IAM Approved no
Call Number IAM @ iam @ PGM2012 Serial 1986
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Author Debora Gil;Agnes Borras;Ruth Aris;Mariano Vazquez;Pierre Lafortune; Guillame Houzeaux
Title What a difference in biomechanics cardiac fiber makes Type Conference Article
Year 2012 Publication Statistical Atlases And Computational Models Of The Heart: Imaging and Modelling Challenges Abbreviated Journal
Volume 7746 Issue Pages 253-260
Keywords
Abstract Computational simulations of the heart are a powerful tool for a comprehensive understanding of cardiac function and its intrinsic relationship with its muscular architecture. Cardiac biomechanical models require a vector field representing the orientation of cardiac fibers. A wrong orientation of the fibers can lead to a
non-realistic simulation of the heart functionality. In this paper we explore the impact of the fiber information on the simulated biomechanics of cardiac muscular anatomy. We have used the John Hopkins database to perform a biomechanical simulation using both a synthetic benchmark fiber distribution and the data obtained experimentally from DTI. Results illustrate how differences in fiber orientation affect heart deformation along cardiac cycle.
Address (down) Nice, France
Corporate Author Thesis
Publisher Springer Berlin Heidelberg Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0302-9743 ISBN 978-3-642-36960-5 Medium
Area Expedition Conference STACOM
Notes IAM Approved no
Call Number IAM @ iam @ GBA2012 Serial 1987
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Author Sergio Vera; Miguel Angel Gonzalez Ballester; Debora Gil
Title Optimal Medial Surface Generation for Anatomical Volume Representations Type Book Chapter
Year 2012 Publication Abdominal Imaging. Computational and Clinical Applications Abbreviated Journal LNCS
Volume 7601 Issue Pages 265-273
Keywords Medial surface representation; volume reconstruction
Abstract Medial representations are a widely used technique in abdominal organ shape representation and parametrization. Those methods require good medial manifolds as a starting point. Any medial
surface used to parametrize a volume should be simple enough to allow an easy manipulation and complete enough to allow an accurate reconstruction of the volume. Obtaining good quality medial
surfaces is still a problem with current iterative thinning methods. This forces the usage of generic, pre-calculated medial templates that are adapted to the final shape at the cost of a drop in volume reconstruction.
This paper describes an operator for generation of medial structures that generates clean and complete manifolds well suited for their further use in medial representations of abdominal organ volumes. While being simpler than thinning surfaces, experiments show its high performance in volume reconstruction and preservation of medial surface main branching topology.
Address (down) Nice, France
Corporate Author Thesis
Publisher Springer Berlin Heidelberg Place of Publication Editor Yoshida, Hiroyuki and Hawkes, David and Vannier, MichaelW.
Language Summary Language Original Title
Series Editor Series Title Lecture Notes in Computer Science Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0302-9743 ISBN 978-3-642-33611-9 Medium
Area Expedition Conference STACOM
Notes IAM Approved no
Call Number IAM @ iam @ VGG2012b Serial 1988
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Author Simeon Petkov; Adriana Romero; Xavier Carrillo; Petia Radeva; Carlo Gatta
Title Robust and accurate diaphragm border detection in cardiac X-Ray angiographies Type Conference Article
Year 2012 Publication Statistical Atlases And Computational Models Of The Heart: Imaging and Modelling Challenges Abbreviated Journal
Volume 7746 Issue Pages 225-234
Keywords
Abstract Workshop STACOM, dins del MICCAI
X-ray angiography is the most common imaging modality employed in the diagnosis of coronary diseases prior to or during a catheter-based intervention. The analysis of the patient X-Ray sequence can provide useful information about the degree of arterial stenosis, the myocardial perfusion and other clinical parameters. If the sequence has been acquired to evaluate the perfusion grade, the opacity due to the diaphragm could potentially hinder any kind of visual inspection and make more difficult a computer aided measurements. In this paper we propose an accurate and robust method to automatically identify the diaphragm border in each frame. Quantitative evaluation on a set of 11 sequences shows that the proposed algorithm outperforms previous methods.
Address (down) Nice, France
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title LNCS
Series Volume Series Issue Edition
ISSN 0302-9743 ISBN 978-3-642-36960-5 Medium
Area Expedition Conference STACOM
Notes MILAB Approved no
Call Number Admin @ si @ PRC2012 Serial 2028
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Author Sergio Vera; Debora Gil; Agnes Borras; F. Javier Sanchez; Frederic Perez; Marius G. Linguraru
Title Computation and Evaluation of Medial Surfaces for Shape Representation of Abdominal Organs Type Conference Article
Year 2011 Publication Workshop on Computational and Clinical Applications in Abdominal Imaging Abbreviated Journal
Volume 7029 Issue Pages 223-230
Keywords
Abstract Medial representations are powerful tools for describing and parameterizing the volumetric shape of anatomical structures. Existing methods show excellent results when applied to 2D objects, but their quality drops across dimensions. This paper contributes to the computation of medial manifolds in two aspects. First, we provide a standard scheme for the computation of medial manifolds that avoid degenerated medial axis segments; second, we introduce an energy based method which performs independently of the dimension. We evaluate quantitatively the performance of our method with respect to existing approaches, by applying them to synthetic shapes of known medial geometry. Finally, we show results on shape representation of multiple abdominal organs, exploring the use of medial manifolds for the representation of multi-organ relations.
Address (down) Nice, France
Corporate Author Thesis
Publisher Springer Berlin Heidelberg Place of Publication Editor In H. Yoshida et al
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference ABDI
Notes IAM; MV Approved no
Call Number VGB2011 Serial 2036
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Author Marina Alberti; Simone Balocco; Xavier Carrillo; Josepa Mauri; Petia Radeva
Title Automatic Non-Rigid Temporal Alignment of IVUS Sequences Type Conference Article
Year 2012 Publication 15th International Conference on Medical Image Computing and Computer Assisted Intervention Abbreviated Journal
Volume 1 Issue Pages 642-650
Keywords
Abstract Clinical studies on atherosclerosis regression/progression performed by Intravascular Ultrasound analysis require the alignment of pullbacks of the same patient before and after clinical interventions. In this paper, a methodology for the automatic alignment of IVUS sequences based on the Dynamic Time Warping technique is proposed. The method is adapted to the specific IVUS alignment task by applying the non-rigid alignment technique to multidimensional morphological signals, and by introducing a sliding window approach together with a regularization term. To show the effectiveness of our method, an extensive validation is performed both on synthetic data and in-vivo IVUS sequences. The proposed method is robust to stent deployment and post dilation surgery and reaches an alignment error of approximately 0.7 mm for in-vivo data, which is comparable to the inter-observer variability.
Address (down) Nice, France
Corporate Author Thesis
Publisher Springer-Verlag Berlin, Heidelberg Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN 978-3-642-33414-6 Medium
Area Expedition Conference MICCAI
Notes MILAB Approved no
Call Number Admin @ si @ ABC2012 Serial 2168
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Author Rui Hua; Oriol Pujol; Francesco Ciompi; Marina Alberti; Simone Balocco; Josepa Mauri; Petia Radeva
Title Stent Strut Detection by Classifying a Wide Set of IVUS Features Type Conference Article
Year 2012 Publication Computed Assisted Stenting Workshop Abbreviated Journal
Volume Issue Pages
Keywords
Abstract
Address (down) Nice, France
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference STENT
Notes MILAB;HuPBA Approved no
Call Number Admin @ si @ HPC2012 Serial 2169
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