Abstract: Medical imaging is very useful in the assessment and treatment of many diseases. To deal with the great amount of data provided by imaging scanners and extract quantitative information that physicians can interpret, many analysis algorithms have been developed. Any process of analysis always consists of a first step of segmenting some particular structure. In medical imaging, structures are not always well defined and suffer from noise artifacts thus, ordinary segmentation methods are not well suited. The ones that seem to give better results are those based on deformable models. Nevertheless, despite their capability of mixing image features together with smoothness constraints that may compensate for image irregularities, these are naturally local methods, i. e., each node of the active contour evolve taking into account information about its neighbors and some other weak constraints about flexibility and smoothness, but not about the global shape that they should find. Due to the fact that structures to be segmented are the same for all cases but with some inter and intra-patient variation, the incorporation of a priori knowledge about shape in the segmentation method will provide robustness to it. Active Shape Models is an algorithm based on the creation of a shape model called Point Distribution Model. It performs a segmentation using only shapes similar than those previously learned from a training set that capture most of the variation presented by the structure. This algorithm works by updating shape nodes along a normal segment which often can be too restrictive. For this reason we propose a generalization of this algorithm that we call Generalized Active Shape Models and fully integrates the a priori knowledge given by the Point Distribution Model with deformable models or any other appropriate segmentation method. Two different applications to cardiac imaging of this generalized method are developed and promising results are shown.

Abstract: An efficient incremental approach to the discriminative common vector (DCV) method for dimensionality reduction and classification is presented. The proposal consists of a rank-one update along with an adaptive restriction on the rank of the null space which leads to an approximate but convenient solution. The algorithm can be implemented very efficiently in terms of matrix operations and space complexity, which enables its use in large-scale dynamic application domains. Deep comparative experimentation using publicly available high dimensional image datasets has been carried out in order to properly assess the proposed algorithm against several recent incremental formulations.
K. Diaz-Chito, F.J. Ferri, W. Diaz

Abstract: We present a general framework for the garment animation problem through unsupervised deep learning inspired in physically based simulation. Existing trends in the literature already explore this possibility. Nonetheless, these approaches do not handle cloth dynamics. Here, we propose the first methodology able to learn realistic cloth dynamics unsupervisedly, and henceforth, a general formulation for neural cloth simulation. The key to achieve this is to adapt an existing optimization scheme for motion from simulation based methodologies to deep learning. Then, analyzing the nature of the problem, we devise an architecture able to automatically disentangle static and dynamic cloth subspaces by design. We will show how this improves model performance. Additionally, this opens the possibility of a novel motion augmentation technique that greatly improves generalization. Finally, we show it also allows to control the level of motion in the predictions. This is a useful, never seen before, tool for artists. We provide of detailed analysis of the problem to establish the bases of neural cloth simulation and guide future research into the specifics of this domain.
ACM Transactions on GraphicsVolume 41Issue 6December 2022 Article No.: 220pp 1–

Abstract: Despite recent advances in automatic text recognition, the performance remains moderate when it comes to historical manuscripts. This is mainly because of the scarcity of available labelled data to train the data-hungry Handwritten Text Recognition (HTR) models. The Keyword Spotting System (KWS) provides a valid alternative to HTR due to the reduction in error rate, but it is usually limited to a closed reference vocabulary. In this paper, we propose a few-shot learning paradigm for spotting sequences of a few characters (N-gram) that requires a small amount of labelled training data. We exhibit that recognition of important n-grams could reduce the system’s dependency on vocabulary. In this case, an out-of-vocabulary (OOV) word in an input handwritten line image could be a sequence of n-grams that belong to the lexicon. An extensive experimental evaluation of our proposed multi-representation approach was carried out on a subset of Bentham’s historical manuscript collections to obtain some really promising results in this direction.

Abstract: Deep convolutional neural networks (CNNs) have achieved superior performance in many visual recognition application, such as image classification, detection and segmentation. In this thesis we address two limitations of CNNs. Training deep CNNs requires huge amounts of labeled data, which is expensive and labor intensive to collect. Another limitation is that training CNNs in a continual learning setting is still an open research question. Catastrophic forgetting is very likely when adapting trained models to new environments or new tasks. Therefore, in this thesis, we aim to improve CNNs for applications with limited data and to adapt CNNs continually to new tasks.
Self-supervised learning leverages unlabelled data by introducing an auxiliary task for which data is abundantly available. In the first part of the thesis, we show how rankings can be used as a proxy self-supervised task for regression problems. Then we propose an efficient backpropagation technique for Siamese networks which prevents the redundant computation introduced by the multi-branch network architecture. In addition, we show that measuring network uncertainty on the self-supervised proxy task is a good measure of informativeness of unlabeled data. This can be used to drive an algorithm for active learning. We then apply our framework on two regression problems: Image Quality Assessment (IQA) and Crowd Counting. For both, we show how to automatically generate ranked image sets from unlabeled data. Our results show that networks trained to regress to the ground truth targets for labeled data and to simultaneously learn to rank unlabeled data obtain significantly better, state-of-the-art results. We further show that active learning using rankings can reduce labeling effort by up to 50\% for both IQA and crowd counting.
In the second part of the thesis, we propose two approaches to avoiding catastrophic forgetting in sequential task learning scenarios. The first approach is derived from Elastic Weight Consolidation, which uses a diagonal Fisher Information Matrix (FIM) to measure the importance of the parameters of the network. However the diagonal assumption is unrealistic. Therefore, we approximately diagonalize the FIM using a set of factorized rotation parameters. This leads to significantly better performance on continual learning of sequential tasks. For the second approach, we show that forgetting manifests differently at different layers in the network and propose a hybrid approach where distillation is used in the feature extractor and replay in the classifier via feature generation. Our method addresses the limitations of generative image replay and probability distillation (i.e. learning without forgetting) and can naturally aggregate new tasks in a single, well-calibrated classifier. Experiments confirm that our proposed approach outperforms the baselines and some start-of-the-art methods.

Abstract: Deep convolutional neural networks (CNNs) have achieved superior performance in many visual recognition applications, such as image classification, detection and segmentation. Training deep CNNs requires huge amounts of labeled data, which is expensive and labor intensive to collect. Active learning is a paradigm aimed at reducing the annotation effort by training the model on actively selected
informative and/or representative samples. In this thesis we study several aspects of active learning including video object detection for autonomous driving systems, image classification on balanced and imbalanced datasets and the incorporation of self-supervised learning in active learning. We briefly describe our approach in each of these areas to reduce the labeling effort.
In chapter two we introduce a novel active learning approach for object detection in videos by exploiting temporal coherence. Our criterion is based on the estimated number of errors in terms of false positives and false negatives. Additionally, we introduce a synthetic video dataset, called SYNTHIA-AL, specially designed to evaluate active
learning for video object detection in road scenes. Finally, we show that our
approach outperforms active learning baselines tested on two outdoor datasets.
In the next chapter we address the well-known problem of over confidence in the neural networks. As an alternative to network confidence, we propose a new informativeness-based active learning method that captures the learning dynamics of neural network with a metric called label-dispersion. This metric is low when the network consistently assigns the same label to the sample during the course of training and high when the assigned label changes frequently. We show that label-dispersion is a promising predictor of the uncertainty of the network, and show on two benchmark datasets that an active learning algorithm based on label-dispersion obtains excellent results.
In chapter four, we tackle the problem of sampling bias in active learning methods on imbalanced datasets. Active learning is generally studied on balanced datasets where an equal amount of images per class is available. However, real-world datasets suffer from severe imbalanced classes, the so called longtail distribution. We argue that this further complicates the active learning process, since the imbalanced data pool can result in suboptimal classifiers. To address this problem in the context of active learning, we propose a general optimization framework that explicitly takes class-balancing into account. Results on three datasets show that the method is general (it can be combined with most existing active learning algorithms) and can be effectively applied to boost the performance of both informative and representative-based active learning methods. In addition, we show that also on balanced datasets our method generally results in a performance gain.
Another paradigm to reduce the annotation effort is self-training that learns from a large amount of unlabeled data in an unsupervised way and fine-tunes on few labeled samples. Recent advancements in self-training have achieved very impressive results rivaling supervised learning on some datasets. In the last chapter we focus on whether active learning and self supervised learning can benefit from each other.
We study object recognition datasets with several labeling budgets for the evaluations. Our experiments reveal that self-training is remarkably more efficient than active learning at reducing the labeling effort, that for a low labeling budget, active learning offers no benefit to self-training, and finally that the combination of active learning and self-training is fruitful when the labeling budget is high.

Abstract: Multi-label zero-shot learning strives to classify images into multiple unseen categories for which no data is available during training. The test samples can additionally contain seen categories in the generalized variant. Existing approaches rely on learning either shared or label-specific attention from the seen classes. Nevertheless, computing reliable attention maps for unseen classes during inference in a multi-label setting is still a challenge. In contrast, state-of-the-art single-label generative adversarial network (GAN) based approaches learn to directly synthesize the class-specific visual features from the corresponding class attribute embeddings. However, synthesizing multi-label features from GANs is still unexplored in the context of zero-shot setting. When multiple objects occur jointly in a single image, a critical question is how to effectively fuse multi-class information. In this work, we introduce different fusion approaches at the attribute-level, feature-level and cross-level (across attribute and feature-levels) for synthesizing multi-label features from their corresponding multi-label class embeddings. To the best of our knowledge, our work is the first to tackle the problem of multi-label feature synthesis in the (generalized) zero-shot setting. Our cross-level fusion-based generative approach outperforms the state-of-the-art on three zero-shot benchmarks: NUS-WIDE, Open Images and MS COCO. Furthermore, we show the generalization capabilities of our fusion approach in the zero-shot detection task on MS COCO, achieving favorable performance against existing methods.

Abstract: Bronchoscopists use X‐ray fluoroscopy to guide bronchoscopes to the lesion to be biopsied without any kind of incisions. Reducing exposure to X‐ray is important for both patients and doctors but alternatives like electromagnetic navigation require specific equipment and increase the cost of the clinical procedure. We propose a guiding system based on the extraction of airway centers from intra‐operative videos. Such anatomical landmarks could be
matched to the airway centerline extracted from a pre‐planned CT to indicate the best path to the lesion. We present an extraction of lumen centers
from intra‐operative videos based on tracking of maximal stable regions of energy maps.