David Roche, Debora Gil, & Jesus Giraldo. (2012). Assessing agonist efficacy in an uncertain Em world. In A. Christopoulus and M. Bouvier (Ed.), 40th Keystone Symposia on mollecular and celular biology (79). Keystone Symposia.
Abstract: The operational model of agonism has been widely used for the analysis of agonist action since its formulation in 1983. The model includes the Em parameter, which is defined as the maximum response of the system. The methods for Em estimation provide Em values not significantly higher than the maximum responses achieved by full agonists. However, it has been found that that some classes of compounds as, for instance, superagonists and positive allosteric modulators can increase the full agonist maximum response, implying upper limits for Em and thereby posing doubts on the validity of Em estimates. Because of the correlation between Em and operational efficacy, τ, wrong Em estimates will yield wrong τ estimates.
In this presentation, the operational model of agonism and various methods for the simulation of allosteric modulation will be analyzed. Alternatives for curve fitting will be presented and discussed.
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Naveen Onkarappa, Sujay M. Veerabhadrappa, & Angel Sappa. (2012). Optical Flow in Onboard Applications: A Study on the Relationship Between Accuracy and Scene Texture. In 4th International Conference on Signal and Image Processing (Vol. 221, pp. 257–267).
Abstract: Optical flow has got a major role in making advanced driver assistance systems (ADAS) a reality. ADAS applications are expected to perform efficiently in all kinds of environments, those are highly probable, that one can drive the vehicle in different kinds of roads, times and seasons. In this work, we study the relationship of optical flow with different roads, that is by analyzing optical flow accuracy on different road textures. Texture measures such as TeX , TeX and TeX are evaluated for this purpose. Further, the relation of regularization weight to the flow accuracy in the presence of different textures is also analyzed. Additionally, we present a framework to generate synthetic sequences of different textures in ADAS scenarios with ground-truth optical flow.
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Alex Pardo, Albert Clapes, Sergio Escalera, & Oriol Pujol. (2013). Actions in Context: System for people with Dementia. In 2nd International Workshop on Citizen Sensor Networks (Citisen2013) at the European Conference on Complex Systems (pp. 3–14). Springer International Publishing.
Abstract: In the next forty years, the number of people living with dementia is expected to triple. In the last stages, people affected by this disease become dependent. This hinders the autonomy of the patient and has a huge social impact in time, money and effort. Given this scenario, we propose an ubiquitous system capable of recognizing daily specific actions. The system fuses and synchronizes data obtained from two complementary modalities – ambient and egocentric. The ambient approach consists in a fixed RGB-Depth camera for user and object recognition and user-object interaction, whereas the egocentric point of view is given by a personal area network (PAN) formed by a few wearable sensors and a smartphone, used for gesture recognition. The system processes multi-modal data in real-time, performing paralleled task recognition and modality synchronization, showing high performance recognizing subjects, objects, and interactions, showing its reliability to be applied in real case scenarios.
Keywords: Multi-modal data Fusion; Computer vision; Wearable sensors; Gesture recognition; Dementia
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S.Grau, Ana Puig, Sergio Escalera, & Maria Salamo. (2013). Intelligent Interactive Volume Classification. In Pacific Graphics (Vol. 32, pp. 23–28).
Abstract: This paper defines an intelligent and interactive framework to classify multiple regions of interest from the original data on demand, without requiring any preprocessing or previous segmentation. The proposed intelligent and interactive approach is divided in three stages: visualize, training and testing. First, users visualize and label some samples directly on slices of the volume. Training and testing are based on a framework of Error Correcting Output Codes and Adaboost classifiers that learn to classify each region the user has painted. Later, at the testing stage, each classifier is directly applied on the rest of samples and combined to perform multi-class labeling, being used in the final rendering. We also parallelized the training stage using a GPU-based implementation for
obtaining a rapid interaction and classification.
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Carles Sanchez. (2011). Tracheal ring detection in bronchoscopy (F. J. S. Debora Gil, Ed.) (Vol. 168). Master's thesis, , .
Abstract: Endoscopy is the process in which a camera is introduced inside a human.
Given that endoscopy provides realistic images (in contrast to other modalities) and allows non-invase minimal intervention procedures (which can aid in diagnosis and surgical interventions), its use has spreaded during last decades.
In this project we will focus on bronchoscopic procedures, during which the camera is introduced through the trachea in order to have a diagnostic of the patient. The diagnostic interventions are focused on: degree of stenosis (reduction in tracheal area), prosthesis or early diagnosis of tumors. In the first case, assessment of the luminal area and the calculation of the diameters of the tracheal rings are required. A main limitation is that all the process is done by hand,
which means that the doctor takes all the measurements and decisions just by looking at the screen. As far as we know there is no computational framework for helping the doctors in the diagnosis.
This project will consist of analysing bronchoscopic videos in order to extract useful information for the diagnostic of the degree of stenosis. In particular we will focus on segmentation of the tracheal rings. As a result of this project several strategies (for detecting tracheal rings) had been implemented in order to compare their performance.
Keywords: Bronchoscopy, tracheal ring, segmentation
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Francesc Tanarro Marquez, Pau Gratacos Marti, F. Javier Sanchez, Joan Ramon Jimenez Minguell, Coen Antens, & Enric Sala i Esteva. (2012). A device for monitoring condition of a railway supply. European Patent Office.
Abstract: of a railway supply line when the supply line is in contact with a head of a pantograph of a vehicle in order to power said vehicle . The device includes a camera ( for monitoring parameters indicative of operating capability of said supply line.
The device is intended to monitor condition
tive of operating capability of said supply line. The device includes a reflective element. comprising a pattern , intended to be arranged onto the pantograph head . The camera is intended to be arranged on the vehicle (10) so as to register the pattern position regarding a vertical direction.
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Oriol Ramos Terrades, Alejandro Hector Toselli, Nicolas Serrano, Veronica Romero, Enrique Vidal, & Alfons Juan. (2010). Interactive layout analysis and transcription systems for historic handwritten documents. In 10th ACM Symposium on Document Engineering (219–222).
Abstract: The amount of digitized legacy documents has been rising dramatically over the last years due mainly to the increasing number of on-line digital libraries publishing this kind of documents, waiting to be classified and finally transcribed into a textual electronic format (such as ASCII or PDF). Nevertheless, most of the available fully-automatic applications addressing this task are far from being perfect and heavy and inefficient human intervention is often required to check and correct the results of such systems. In contrast, multimodal interactive-predictive approaches may allow the users to participate in the process helping the system to improve the overall performance. With this in mind, two sets of recent advances are introduced in this work: a novel interactive method for text block detection and two multimodal interactive handwritten text transcription systems which use active learning and interactive-predictive technologies in the recognition process.
Keywords: Handwriting recognition; Interactive predictive processing; Partial supervision; Interactive layout analysis
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Fahad Shahbaz Khan, Muhammad Anwer Rao, Joost Van de Weijer, Andrew Bagdanov, Maria Vanrell, & Antonio Lopez. (2012). Color Attributes for Object Detection. In 25th IEEE Conference on Computer Vision and Pattern Recognition (pp. 3306–3313). IEEE Xplore.
Abstract: State-of-the-art object detectors typically use shape information as a low level feature representation to capture the local structure of an object. This paper shows that early fusion of shape and color, as is popular in image classification,
leads to a significant drop in performance for object detection. Moreover, such approaches also yields suboptimal results for object categories with varying importance of color and shape.
In this paper we propose the use of color attributes as an explicit color representation for object detection. Color attributes are compact, computationally efficient, and when combined with traditional shape features provide state-ofthe-
art results for object detection. Our method is tested on the PASCAL VOC 2007 and 2009 datasets and results clearly show that our method improves over state-of-the-art techniques despite its simplicity. We also introduce a new dataset consisting of cartoon character images in which color plays a pivotal role. On this dataset, our approach yields a significant gain of 14% in mean AP over conventional state-of-the-art methods.
Keywords: pedestrian detection
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G.D. Evangelidis, Ferran Diego, Joan Serrat, & Antonio Lopez. (2011). Slice Matching for Accurate Spatio-Temporal Alignment. In In ICCV Workshop on Visual Surveillance.
Abstract: Video synchronization and alignment is a rather recent topic in computer vision. It usually deals with the problem of aligning sequences recorded simultaneously by static, jointly- or independently-moving cameras. In this paper, we investigate the more difficult problem of matching videos captured at different times from independently-moving cameras, whose trajectories are approximately coincident or parallel. To this end, we propose a novel method that pixel-wise aligns videos and allows thus to automatically highlight their differences. This primarily aims at visual surveillance but the method can be adopted as is by other related video applications, like object transfer (augmented reality) or high dynamic range video. We build upon a slice matching scheme to first synchronize the sequences, while we develop a spatio-temporal alignment scheme to spatially register corresponding frames and refine the temporal mapping. We investigate the performance of the proposed method on videos recorded from vehicles driven along different types of roads and compare with related previous works.
Keywords: video alignment
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Gemma Roig, Xavier Boix, F. de la Torre, Joan Serrat, & C. Vilella. (2011). Hierarchical CRF with product label spaces for parts-based Models. In IEEE Conference on Automatic Face and Gesture Recognition (pp. 657–664).
Abstract: Non-rigid object detection is a challenging an open research problem in computer vision. It is a critical part in many applications such as image search, surveillance, human-computer interaction or image auto-annotation. Most successful approaches to non-rigid object detection make use of part-based models. In particular, Conditional Random Fields (CRF) have been successfully embedded into a discriminative parts-based model framework due to its effectiveness for learning and inference (usually based on a tree structure). However, CRF-based approaches do not incorporate global constraints and only model pairwise interactions. This is especially important when modeling object classes that may have complex parts interactions (e.g. facial features or body articulations), because neglecting them yields an oversimplified model with suboptimal performance. To overcome this limitation, this paper proposes a novel hierarchical CRF (HCRF). The main contribution is to build a hierarchy of part combinations by extending the label set to a hierarchy of product label spaces. In order to keep the inference computation tractable, we propose an effective method to reduce the new label set. We test our method on two applications: facial feature detection on the Multi-PIE database and human pose estimation on the Buffy dataset.
Keywords: Shape; Computational modeling; Principal component analysis; Random variables; Color; Upper bound; Facial features
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Albert Andaluz. (2012). Harmonic Phase Flow: User's guide. Barcelona: CVC.
Abstract: HPF is a plugin for the computation of clinical scores under Osirix.
This manual provides a basic guide for experienced clinical staff. Chapter 1 provides the theoretical background in which this plugin is based.
Next, in chapter 2 we provide basic instructions for installing and uninstalling this plugin. chapter 3we shows a step-by-step scenario to compute clinical scores from tagged-MRI images with HPF. Finally, in chapter 4 we provide a quick guide for plugin developers
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Fahad Shahbaz Khan, Joost Van de Weijer, Andrew Bagdanov, & Maria Vanrell. (2011). Portmanteau Vocabularies for Multi-Cue Image Representation. In 25th Annual Conference on Neural Information Processing Systems.
Abstract: We describe a novel technique for feature combination in the bag-of-words model of image classification. Our approach builds discriminative compound words from primitive cues learned independently from training images. Our main observation is that modeling joint-cue distributions independently is more statistically robust for typical classification problems than attempting to empirically estimate the dependent, joint-cue distribution directly. We use Information theoretic vocabulary compression to find discriminative combinations of cues and the resulting vocabulary of portmanteau words is compact, has the cue binding property, and supports individual weighting of cues in the final image representation. State-of-the-art results on both the Oxford Flower-102 and Caltech-UCSD Bird-200 datasets demonstrate the effectiveness of our technique compared to other, significantly more complex approaches to multi-cue image representation
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Naila Murray, Sandra Skaff, Luca Marchesotti, & Florent Perronnin. (2011). Towards Automatic Concept Transfer. In Proceedings of the ACM SIGGRAPH/Eurographics Symposium on Non-Photorealistic Animation and Rendering (167.176). ACM Press.
Abstract: This paper introduces a novel approach to automatic concept transfer; examples of concepts are “romantic”, “earthy”, and “luscious”. The approach modifies the color content of an input image given only a concept specified by a user in natural language, thereby requiring minimal user input. This approach is particularly useful for users who are aware of the message they wish to convey in the transferred image while being unsure of the color combination needed to achieve the corresponding transfer. The user may adjust the intensity level of the concept transfer to his/her liking with a single parameter. The proposed approach uses a convex clustering algorithm, with a novel pruning mechanism, to automatically set the complexity of models of chromatic content. It also uses the Earth-Mover's Distance to compute a mapping between the models of the input image and the target chromatic concept. Results show that our approach yields transferred images which effectively represent concepts, as confirmed by a user study.
Keywords: chromatic modeling, color concepts, color transfer, concept transfer
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Jordi Roca, C. Alejandro Parraga, & Maria Vanrell. (2011). Categorical Focal Colours are Structurally Invariant Under Illuminant Changes. In European Conference on Visual Perception (196). Perception 40.
Abstract: The visual system perceives the colour of surfaces approximately constant under changes of illumination. In this work, we investigate how stable is the perception of categorical \“focal\” colours and their interrelations with varying illuminants and simple chromatic backgrounds. It has been proposed that best examples of colour categories across languages cluster in small regions of the colour space and are restricted to a set of 11 basic terms (Kay and Regier, 2003 Proceedings of the National Academy of Sciences of the USA 100 9085\–9089). Following this, we developed a psychophysical paradigm that exploits the ability of subjects to reliably reproduce the most representative examples of each category, adjusting multiple test patches embedded in a coloured Mondrian. The experiment was run on a CRT monitor (inside a dark room) under various simulated illuminants. We modelled the recorded data for each subject and adapted state as a 3D interconnected structure (graph) in Lab space. The graph nodes were the subject\’s focal colours at each adaptation state. The model allowed us to get a better distance measure between focal structures under different illuminants. We found that perceptual focal structures tend to be preserved better than the structures of the physical \“ideal\” colours under illuminant changes.
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N. Serrano, L. Tarazon, D. Perez, Oriol Ramos Terrades, & S. Juan. (2010). The GIDOC Prototype. In 10th International Workshop on Pattern Recognition in Information Systems (pp. 82–89).
Abstract: Transcription of handwritten text in (old) documents is an important, time-consuming task for digital libraries. It might be carried out by first processing all document images off-line, and then manually supervising system transcriptions to edit incorrect parts. However, current techniques for automatic page layout analysis, text line detection and handwriting recognition are still far from perfect, and thus post-editing system output is not clearly better than simply ignoring it.
A more effective approach to transcribe old text documents is to follow an interactive- predictive paradigm in which both, the system is guided by the user, and the user is assisted by the system to complete the transcription task as efficiently as possible. Following this approach, a system prototype called GIDOC (Gimp-based Interactive transcription of old text DOCuments) has been developed to provide user-friendly, integrated support for interactive-predictive layout analysis, line detection and handwriting transcription.
GIDOC is designed to work with (large) collections of homogeneous documents, that is, of similar structure and writing styles. They are annotated sequentially, by (par- tially) supervising hypotheses drawn from statistical models that are constantly updated with an increasing number of available annotated documents. And this is done at different annotation levels. For instance, at the level of page layout analysis, GIDOC uses a novel text block detection method in which conventional, memoryless techniques are improved with a “history” model of text block positions. Similarly, at the level of text line image transcription, GIDOC includes a handwriting recognizer which is steadily improved with a growing number of (partially) supervised transcriptions.
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