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Fernando Vilariño; Panagiota Spyridonos; Fosca De Iorio; Jordi Vitria; Fernando Azpiroz; Petia Radeva |
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Title |
Intestinal Motility Assessment With Video Capsule Endoscopy: Automatic Annotation of Phasic Intestinal Contractions |
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Journal Article |
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Year |
2010 |
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IEEE Transactions on Medical Imaging |
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TMI |
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29 |
Issue |
2 |
Pages |
246-259 |
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Abstract |
Intestinal motility assessment with video capsule endoscopy arises as a novel and challenging clinical fieldwork. This technique is based on the analysis of the patterns of intestinal contractions shown in a video provided by an ingestible capsule with a wireless micro-camera. The manual labeling of all the motility events requires large amount of time for offline screening in search of findings with low prevalence, which turns this procedure currently unpractical. In this paper, we propose a machine learning system to automatically detect the phasic intestinal contractions in video capsule endoscopy, driving a useful but not feasible clinical routine into a feasible clinical procedure. Our proposal is based on a sequential design which involves the analysis of textural, color, and blob features together with SVM classifiers. Our approach tackles the reduction of the imbalance rate of data and allows the inclusion of domain knowledge as new stages in the cascade. We present a detailed analysis, both in a quantitative and a qualitative way, by providing several measures of performance and the assessment study of interobserver variability. Our system performs at 70% of sensitivity for individual detection, whilst obtaining equivalent patterns to those of the experts for density of contractions. |
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0278-0062 |
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800 |
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MILAB;MV;OR;SIAI |
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BCNPCL @ bcnpcl @ VSD2010; IAM @ iam @ VSI2010 |
Serial |
1281 |
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Author |
Sergio Escalera; Oriol Pujol; Petia Radeva; Jordi Vitria; Maria Teresa Anguera |
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Title |
Automatic Detection of Dominance and Expected Interest |
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Journal Article |
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2010 |
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EURASIP Journal on Advances in Signal Processing |
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EURASIPJ |
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12 |
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Article ID 491819
Social Signal Processing is an emergent area of research that focuses on the analysis of social constructs. Dominance and interest are two of these social constructs. Dominance refers to the level of influence a person has in a conversation. Interest, when referred in terms of group interactions, can be defined as the degree of engagement that the members of a group collectively display during their interaction. In this paper, we argue that only using behavioral motion information, we are able to predict the interest of observers when looking at face-to-face interactions as well as the dominant people. First, we propose a simple set of movement-based features from body, face, and mouth activity in order to define a higher set of interaction indicators. The considered indicators are manually annotated by observers. Based on the opinions obtained, we define an automatic binary dominance detection problem and a multiclass interest quantification problem. Error-Correcting Output Codes framework is used to learn to rank the perceived observer's interest in face-to-face interactions meanwhile Adaboost is used to solve the dominant detection problem. The automatic system shows good correlation between the automatic categorization results and the manual ranking made by the observers in both dominance and interest detection problems. |
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1110-8657 |
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OR;MILAB;HUPBA;MV |
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BCNPCL @ bcnpcl @ EPR2010d |
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1283 |
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Sergio Escalera; Oriol Pujol; Petia Radeva |
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Title |
Error-Correcting Output Codes Library |
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Journal Article |
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2010 |
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Journal of Machine Learning Research |
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JMLR |
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11 |
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661-664 |
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(Feb):661−664
In this paper, we present an open source Error-Correcting Output Codes (ECOC) library. The ECOC framework is a powerful tool to deal with multi-class categorization problems. This library contains both state-of-the-art coding (one-versus-one, one-versus-all, dense random, sparse random, DECOC, forest-ECOC, and ECOC-ONE) and decoding designs (hamming, euclidean, inverse hamming, laplacian, β-density, attenuated, loss-based, probabilistic kernel-based, and loss-weighted) with the parameters defined by the authors, as well as the option to include your own coding, decoding, and base classifier. |
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1532-4435 |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ EPR2010c |
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1286 |
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Author |
David Rotger; Petia Radeva; N. Bruining |
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Title |
Automatic Detection of Bioabsorbable Coronary Stents in IVUS Images using a Cascade of Classifiers |
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2010 |
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IEEE Transactions on Information Technology in Biomedicine |
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TITB |
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14 |
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2 |
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535 – 537 |
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Bioabsorbable drug-eluting coronary stents present a very promising improvement to the common metallic ones solving some of the most important problems of stent implantation: the late restenosis. These stents made of poly-L-lactic acid cause a very subtle acoustic shadow (compared to the metallic ones) making difficult the automatic detection and measurements in images. In this paper, we propose a novel approach based on a cascade of GentleBoost classifiers to detect the stent struts using structural features to code the information of the different subregions of the struts. A stochastic gradient descent method is applied to optimize the overall performance of the detector. Validation results of struts detection are very encouraging with an average F-measure of 81%. |
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MILAB |
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BCNPCL @ bcnpcl @ RRB2010 |
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1287 |
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Author |
Francesco Ciompi; Oriol Pujol; Carlo Gatta; O. Rodriguez-Leor; J. Mauri; Petia Radeva |
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Title |
Fusing in-vitro and in-vivo intravascular ultrasound data for plaque characterization |
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Journal Article |
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Year |
2010 |
Publication |
International Journal of Cardiovascular Imaging |
Abbreviated Journal |
IJCI |
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Volume |
26 |
Issue |
7 |
Pages |
763–779 |
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Accurate detection of in-vivo vulnerable plaque in coronary arteries is still an open problem. Recent studies show that it is highly related to tissue structure and composition. Intravascular Ultrasound (IVUS) is a powerful imaging technique that gives a detailed cross-sectional image of the vessel, allowing to explore arteries morphology. IVUS data validation is usually performed by comparing post-mortem (in-vitro) IVUS data and corresponding histological analysis of the tissue. The main drawback of this method is the few number of available case studies and validated data due to the complex procedure of histological analysis of the tissue. On the other hand, IVUS data from in-vivo cases is easy to obtain but it can not be histologically validated. In this work, we propose to enhance the in-vitro training data set by selectively including examples from in-vivo plaques. For this purpose, a Sequential Floating Forward Selection method is reformulated in the context of plaque characterization. The enhanced classifier performance is validated on in-vitro data set, yielding an overall accuracy of 91.59% in discriminating among fibrotic, lipidic and calcified plaques, while reducing the gap between in-vivo and in-vitro data analysis. Experimental results suggest that the obtained classifier could be properly applied on in-vivo plaque characterization and also demonstrate that the common hypothesis of assuming the difference between in-vivo and in-vitro as negligible is incorrect. |
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1569-5794 |
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MILAB;HUPBA |
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BCNPCL @ bcnpcl @ CPG2010 |
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1305 |
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