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Jorge Bernal, F. Javier Sanchez, & Fernando Vilariño. (2012). Towards Automatic Polyp Detection with a Polyp Appearance Model. PR - Pattern Recognition, 45(9), 3166–3182.
Abstract: This work aims at the automatic polyp detection by using a model of polyp appearance in the context of the analysis of colonoscopy videos. Our method consists of three stages: region segmentation, region description and region classification. The performance of our region segmentation method guarantees that if a polyp is present in the image, it will be exclusively and totally contained in a single region. The output of the algorithm also defines which regions can be considered as non-informative. We define as our region descriptor the novel Sector Accumulation-Depth of Valleys Accumulation (SA-DOVA), which provides a necessary but not sufficient condition for the polyp presence. Finally, we classify our segmented regions according to the maximal values of the SA-DOVA descriptor. Our preliminary classification results are promising, especially when classifying those parts of the image that do not contain a polyp inside.
Keywords: Colonoscopy,PolypDetection,RegionSegmentation,SA-DOVA descriptot
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Santiago Segui, Michal Drozdzal, Fernando Vilariño, Carolina Malagelada, Fernando Azpiroz, Petia Radeva, et al. (2012). Categorization and Segmentation of Intestinal Content Frames for Wireless Capsule Endoscopy. TITB - IEEE Transactions on Information Technology in Biomedicine, 16(6), 1341–1352.
Abstract: Wireless capsule endoscopy (WCE) is a device that allows the direct visualization of gastrointestinal tract with minimal discomfort for the patient, but at the price of a large amount of time for screening. In order to reduce this time, several works have proposed to automatically remove all the frames showing intestinal content. These methods label frames as {intestinal content – clear} without discriminating between types of content (with different physiological meaning) or the portion of image covered. In addition, since the presence of intestinal content has been identified as an indicator of intestinal motility, its accurate quantification can show a potential clinical relevance. In this paper, we present a method for the robust detection and segmentation of intestinal content in WCE images, together with its further discrimination between turbid liquid and bubbles. Our proposal is based on a twofold system. First, frames presenting intestinal content are detected by a support vector machine classifier using color and textural information. Second, intestinal content frames are segmented into {turbid, bubbles, and clear} regions. We show a detailed validation using a large dataset. Our system outperforms previous methods and, for the first time, discriminates between turbid from bubbles media.
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Fernando Vilariño, Stephan Ameling, Gerard Lacey, Stephen Patchett, & Hugh Mulcahy. (2009). Eye Tracking Search Patterns in Expert and Trainee Colonoscopists: A Novel Method of Assessing Endoscopic Competency? GI - Gastrointestinal Endoscopy, 69(5), 370.
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Rozenn Dhayot, Fernando Vilariño, & Gerard Lacey. (2008). Improving the Quality of Color Colonoscopy Videos. EURASIP JIVP - EURASIP Journal on Image and Video Processing, 139429(1), 1–9.
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Mirko Arnold, Anarta Ghosh, Stephen Ameling, & G Lacey. (2010). Automatic segmentation and inpainting of specular highlights for endoscopic imaging. EURASIP JIVP - EURASIP Journal on Image and Video Processing, 2010(9).
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